EsuBft4711_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft4711_2a-0001
Unique Name	EsuBft4711_2a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_548:295569..297907-
coding sequence from alignment at Scaffold_548:295569..297907-

spliced messenger RNA

>EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=768bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGAAACACGACAGACACCACCAGGCGGGGGTG
GTGGCCACGCAGAAAATCGGCCGCGTGGAAGAGAGGGCCGAGCCGCGGGT
GATGCGACCCCCTCATCGTTCTTGAGCGAGGGCGCCGTGAAGGCGGTCGT
CGGCACGGTGGAGAGCTACGCCGACTTCGCCAGGGGAACTCTGGAGGCAG
ACGAGCTGGCCGTACAACAAGGGCGCCCGCTGCAGGGAAAGTATATCGTG
CTGGATTCGGGAAACGAGCTCGTCAATCGCCTGCGCGGGGTGATGAGCGG
CTTCTTTCTGGGCATGTTGACGGATAGGGTGTTCGTGGCCGACATCACGT
ACCAGAAGGACGGCACACAAGGGCTGCTGAGTGCTCTGTTTGAGGGGCCG
GGATACGAGGTGCGGAAAGCGACGGCTTTTTTTATTCTTGTCCCGTCGTT
TTTACCAGTCATAACCCACGTTCACTGCTCGCCGTGGCACCGCTTTTTCC
TGCTGGGCTACGTAGTCCCGATTTCGATTGCACATGGTGTAGAAATGACT
GGTACTTGCTCGGTTTAG

protein sequence of EsuBft4711_2a-0001

>EsuBft4711_2 ID=EsuBft4711_2|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=255bp
MASAAAILYVCGWDSTRHAGEKKVAVDATASNSQSVGDAQWAAVVEGRDE
PGGGDHPWAGKGPEGSFHEGLGQETRQTPPGGGGGHAENRPRGREGRAAG
DATPSSFLSEGAVKAVVGTVESYADFARGTLEADELAVQQGRPLQGKYIV
LDSGNELVNRLRGVMSGFFLGMLTDRVFVADITYQKDGTQGLLSALFEGP
GYEVRKATAFFILVPSFLPVITHVHCSPWHRFFLLGYVVPISIAHGVEMT
GTCSV

mRNA from alignment at Scaffold_548:295569..297907-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2339bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGTATGGGAAGGGTAGCGTGTCCGTGGTGTTA
TGCAGGGCTGATAGGTTATGTAGAGAGAGACTACTGTAGTGCTCAAGTGG
TGGATTGTGAAAGCACATCCTAGCGTGTTGCCTTGGTAGCAGCGGCGTTA
TGCTCGTGGTATTGTGATGTTGCGCCAGTTGTTTTGTTCGTTTTGATGGG
GCTGGAGGCTGCATGTAACATACGACCAGTGCTTATTTCCGCCGGCTCCT
GCTGGAGTGATCCGATCAAAGCCTTCCACCGTAGATCCTAGTGTCGCTAC
ACGTCAGCCAGAAAAATTCAATCTCTGCACCAACCGGACCAGCACCTTCC
AAGCCGTTAGACAAGACGCGACGGCACACCCGATCTGCTGTCGGACTGCT
GCCAGGTCAAAATCAACCAAGTACAGTATCACAACAAAACCTCGGCGATT
AAACCCGAGCCTCGAACCTGCTGTGCTACGTGGCATGACCAGATATCCTG
CCTCTTCCCTCCTTGTCCGCTGCTGATCAAAAACACCGCGCCGACTGCGC
TCCGAATCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGTAACCATAATGGTGGCCGAGT
AGATCATGTTGTGCGGGGTGGAGAATCCTCGCTCCGCGCAAGGGGGATGA
TCGCACCACGTTGTGTTAAAATGGTCAAGCACCCTCGAGGCAGTTACACG
GTGCTTACAACTGTCTCTGGAAGTGAAGCATCCAGAAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCCCCCCCACGATGGGAACATAGGAAACA
CGACAGACACCACCAGGCGGGGGTGGTGGCCACGCAGAAAATCGGCCGCG
TGGAAGAGAGGGCCGAGCCGCGGGTGATGCGACCCCCTCATCGTTCTTGA
GCGAGGGCGCCGTGAAGGCGGTCGTCGGCACGGTGGAGAGCTACGCCGAC
TTCGCCAGGGGAACTCTGGAGGCAGACGAGCTGGCCGTACAACAAGGGCG
CCCGCTGCAGGTGTACAAGTAGACGGCAGCAAAAAATGGCGGTGTGCCGT
AGGCTTGAAGAGCTATTGCTTGGATGGTGGGGCCCCGTTCAGCTTGCGTT
TGGCTTGTCATTGACCACTGGTTGTTGGCCTGGTGTGGGGCACGAGCTAC
GATTTTTCACAGCCGAGGAAGTGTTTCCGTGTGGTTGTCGTAAGCGGAGA
GAGCGCAAGGTTCGGGCCGGGGGGCATTGCGACGTCAAGCTTCACCAGAA
TATGCTCCCCCGCCGCCGCCGCCGCGTCAAGACGAAAGCACGCCGCACAT
TTTGGTGGCTGTTCTTATGACTCTATCGGGAATAGGGAACGAGGGTTCCG
CAAGTCAAGAAACAAGATGCGAGGCCCGGCGGCCTATCGCCTCGAGGAAA
CCAATGAGTGAGCTCCTCCACTACCCGCATTCCCCGCTTTGGTCGACTAT
TGCCACAACTACCACCTCCACCACCATCACCATAGTTATCATCAGCACCA
GATGTTAGCGATGTCTCCTGCGAAGGTTGTTCGGTTTGGAAAGGGGCGCG
TAGTGACTGGTCGGATCGCTGTGAGTCCAGCCACAATATCATCGCAACCC
CGATCGACCGACGGTGAGACTTCACGGCTCACCCCTTCCCTTGCTTTCCT
CGACAGGGAAAGTATATCGTGCTGGATTCGGGAAACGAGCTCGTCAATCG
CCTGCGCGGGGTGATGAGCGGCTTCTTTCTGGGCATGTTGACGGATAGGG
TGTTCGTGGCCGACATCACGTACCAGAAGGACGGCACACAAGGGCTGCTG
AGTGCTCTGTTTGAGGGGCCGGGATACGAGGTGCGGAAAGCGACGGCTTT
TTTTATTCTTGTCCCGTCGTTTTTACCAGTCATAACCCACGTTCACTGCT
CGCCGTGGCACCGCTTTTTCCTGCTGGGCTACGTAGTCCCGATTTCGATT
GCACATGGTGTAGAAATGACTGGTACTTGCTCGGTTTAG

Coding sequence (CDS) from alignment at Scaffold_548:295569..297907-

>EsuBft4711_2a-0001 ID=EsuBft4711_2a-0001|Name=EsuBft4711_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=768bp|location=Sequence derived from alignment at Scaffold_548:295569..297907- (Ectocarpus subulatus male Bft15b)
ATGGCGTCGGCAGCAGCGATCTTGTACGTCTGCGGCTGGGATTCGACGCG
CCATGCGGGGGAAAAGAAAGTTGCCGTCGATGCTACGGCCAGCAACAGCC
AGAGTGTGGGTGACGCACAGTGGGCGGCCGTTGTAGAGGGGCGAGACGAG
CCCGGCGGTGGTGATCACCCGTGGGCGGGAAAGGGGCCGGAAGGAAGCTT
TCACGAAGGGCTTGGACAGGAAACACGACAGACACCACCAGGCGGGGGTG
GTGGCCACGCAGAAAATCGGCCGCGTGGAAGAGAGGGCCGAGCCGCGGGT
GATGCGACCCCCTCATCGTTCTTGAGCGAGGGCGCCGTGAAGGCGGTCGT
CGGCACGGTGGAGAGCTACGCCGACTTCGCCAGGGGAACTCTGGAGGCAG
ACGAGCTGGCCGTACAACAAGGGCGCCCGCTGCAGGGAAAGTATATCGTG
CTGGATTCGGGAAACGAGCTCGTCAATCGCCTGCGCGGGGTGATGAGCGG
CTTCTTTCTGGGCATGTTGACGGATAGGGTGTTCGTGGCCGACATCACGT
ACCAGAAGGACGGCACACAAGGGCTGCTGAGTGCTCTGTTTGAGGGGCCG
GGATACGAGGTGCGGAAAGCGACGGCTTTTTTTATTCTTGTCCCGTCGTT
TTTACCAGTCATAACCCACGTTCACTGCTCGCCGTGGCACCGCTTTTTCC
TGCTGGGCTACGTAGTCCCGATTTCGATTGCACATGGTGTAGAAATGACT
GGTACTTGCTCGGTTTAG