Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft468_16 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 185 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft468_16a-0001 ID=EsuBft468_16a-0001|Name=EsuBft468_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1852bp|location=Sequence derived from alignment at Scaffold_189:458253..461022- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAATGCGGCGGGATTCAATTCACAGGGAAGATCAACTCGGAGCGACCC
GTTCACCCCGCCAATCGACTCCGCTTGGTCGAATTACCCACAAAGGAACT
TACTGCAGGATTTCCCGCCCCCACCTCGACAAGGTACTGCTCATTCCCTT
CCCGTCGCCTGGACGGTGGCGGCTGCTGCCACCATGCTGAGGCGCGATAT
CAAAATTGCGGGAGAAGCGAGGGTCATCAACGCCCGCACGCCAGGGGCTA
TCACCTGACCTCCACGCTGCTGAGGAAGGGCGCTGAGGCTGCGGCTACCA
AGGCAATAGACTCTGTGGTGGATGACCTCGAGGGCGTTATACATATGGCT
CGAGAGGATGTTGATGACCTTCAAGAACGGGCTACTAAACGTCGCGAGAA
GAAACCGGAAGGAGCCGCCACCAGATCTGCTGCCGCTGCTGCGGTGGCTG
CTGCTGCTGCCGAACGAGGTCTAAGCTTAGGAGTCGATGCACGTCTCGCT
CGCTCGGATCCGCTTGAGGCGCTTTTTTCAACGGACAGACGAGAAGCCCA
CAACCCGCGACGACTCCTCCACGACAACGGCAAACGGCTATCGACCAGCA
CCGCGACGGGGTGAAGCAGAGCGTGTTAGAAGATGATGTGTTGAAGGAGG
AGCTGAGGGAGGTGCTGGATGTCGGAGAACTTAAAAGAGGCAGCGGCGAC
GAAGGCTGCTGTCGATGCGGAGAACATTCGCGCACTGGTCGCCTCTATAG
AGACGCTGAAGCTGCACTCCCTCAGCAACATCGGCCGCGCTGCCTACAAC
ACCGTCATTGCCGCAGCTGCTGGAGCGGAGCACACGTGCGATCCTGATGA
CCCTTGCACCCCGGATGAGCCGTGCGCACCTGCTGAGCCGCATGGTGCCG
TCAGCCTTGCCGCGCGAGTATAGGGTCTCGGTGTGAGAGACCCAACGTTC
CGTGCAGCGCGTGCCCGTATGCACAGGACTGACCACACCATACCTCCACA
GGAAGATTTGGAGAAGGGGAGATACCTCTGGGCTCCTCGCAAGGAGAGGA
GCGACAAGATGGACGAACGTGTCATGGGTTTGGCGAGGAGGTTCTGGCAC
TCTGACGATATTTCTCGTGCGTCGGGAGACTCCGGAAAGCGGACGAAAGC
TATGTGGAGGCCTCCAAGAAGGGAGGGGAGAAGCATCACCCCCGTAGGCA
GCTCGTGGTCGCGGGGGACCAAGTATGGCGCAAGTTTATGAAGTGGCTGG
AGTACTTGGGGCTTAAAGCGGAGCTGCTGAGGGAAGACAGTAGCTTCGCG
GACCCTGGGCGGACGCTGTTCCTCTCGACGCGGTGTGGGTGTTATGTGGA
ACCCAAGGTATCGCAGTGTGCATGCCAGATCCACACGCAGCAGGGGATGT
ACCTGAAGGCCTTCGAGATGTTGATGCCTGCAATACATGCCAACTGCAAC
TGCACGTGCAAGTGGTGCGACGGGGGGAGTGGGTGTGGAAGTGGATGGCC
ATGTGTAAAGATCTGCACAGCTTTTCTGAGGCTGTGGCTTGCGAGATGGT
AGACTTTGTTGAAGAGGACCGAGGGGGTAGGTTTGAGCACTGGGGGAGGA
AGCCCGCATACGTTGCGATTGAATGCTCCGAATGCGGGTTTAGCAACCCT
GGCAGCATCCCCATGAACTGCGATGCCCTGGGGTCTATGGCGGACAGAGT
AGTCGGGTGGCTTCGGTACAAGGATCAAGTCATGGAGGATGGGAAGGTGC
ACAAGAAGCAGCGGCTACCCCAGGCTGGAAAACTGGGTGACCTGTGGCAG
GAGTTTGTGGAGCACTCCAAGAAGTATCTTCATCACCATGAGCTAGCCAA
GT back to topprotein sequence of EsuBft468_16a-0001 >EsuBft468_16 ID=EsuBft468_16|Name=EsuBft468_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=85bp
MNAAGFNSQGRSTRSDPFTPPIDSAWSNYPQRNLLQDFPPPPRQGTAHSL
PVAWTVAAAATMLRRDIKIAGEARVINARTPGAIT back to topmRNA from alignment at Scaffold_189:458253..461022- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft468_16a-0001 ID=EsuBft468_16a-0001|Name=EsuBft468_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2770bp|location=Sequence derived from alignment at Scaffold_189:458253..461022- (Ectocarpus subulatus male Bft15b)
ATGAATGCGGCGGGATTCAATTCACAGGGAAGATCAACTCGGAGCGACCC
GTTCACCCCGCCAATCGACTCCGCTTGGTCGAATTACCCACAAAGGAACT
TACTGCAGGATTTCCCGCCCCCACCTCGACAAGGTACTGCTCATTCCCTT
CCCGTCGCCTGGACGGTGGCGGCTGCTGCCACCATGCTGAGGCGCGATAT
CAAAATTGCGGGAGAAGCGAGGGTCATCAACGCCCGCACGCCAGGGGCTA
TCACCTGACCTCCACGCTGCTGAGGAAGGGCGCTGAGGCTGCGGCTACCA
AGGCAATAGACTCTGTGGTGGATGACCTCGAGGGCGTTATACATATGGCT
CGAGAGGATGTTGATGACCTTCAAGAACGGGCTACTAAACGTCGCGAGAA
GAAACCGGAAGGAGCCGCCACCAGATCTGCTGCCGCTGCTGCGGTGGCTG
CTGCTGCTGCCGAACGAGGTCTAAGCTTAGGAGTCGATGCACGTCTCGCT
CGCTCGGATCCGCTTGAGGCGCTTTTTTCAACGGACAGACGAGAAGCCCA
CAACCCGCGACGACTCCTCCACGACAACGGCAAACGGTAAGTCCAGAGCG
GTTTACGGCACGAGATAGGGTGATATCTTGCGTATTTTTCAAATCTTTTA
ATTTCCCTGTAGGCTACCGGATATGACACAAGATAACACACCCCCTTGAC
CGATTCTCGAAGCTCGATTTCTCAACTGCAGGAACAGTCACAGCGCCGAA
AACGGCGGCGTTGAATCCGTCTCGTCGAGAGCTTTTCGAAAATGTATCAT
TTCGTGTATGCATTCTCCTCGTCGTGGAGTAATCGAGCTTTGAAAATCGG
TACAGGGGGTGTGTTATCTTGTGTCATATAACGTAGACTTCTGCTGTATT
CCCGGTATATTTCCCCTGCTCTCCATCTTCCCACGAAAGTAATGAGTCCC
ATCCTCACATTTCCCCCCTCTCTCGTCAAAAATTGCTTCAAATTTTATCG
TAATCAAACAGGCTATCGACCAGCACCGCGACGGGGTGAAGCAGAGCGTG
TTAGAAGATGATGTGTTGAAGGAGGAGCTGAGGGAGGTGCTGGATGTCGG
AGAACTTAAAAGAGGCAGCGGCGACGAAGGCTGCTGTCGATGCGGAGAAC
ATTCGCGCACTGGTCGCCTCTATAGAGACGCTGAAGCTGCACTCCCTCAG
CAACATCGGCCGCGCTGCCTACAACACCGTCATTGCCGCAGCTGCTGGAG
CGGAGCACACGTGCGATCCTGATGACCCTTGCACCCCGGATGAGCCGTGC
GCACCTGCTGAGCCGCATGGTGCCGTCAGCCTTGCCGCGCGAGTATAGGG
TCTCGGTGTGAGAGACCCAACGTTCCGTGCAGCGCGTGCCCGTATGCACA
GGACTGACCACACCATACCTCCACAGGAAGATTTGGAGAAGGGGAGATAC
CTCTGGGCTCCTCGCAAGGAGAGGAGCGACAAGATGGACGAACGTGTCAT
GGGTTTGGCGAGGAGGTTCTGGCACTCTGACGATATTTCTCGTGCGTCGG
GAGACTCCGGAAAGCGTTTTCAAATTTTGTTGTTGTACAAATGTAGATCG
GGGTATCTCCTTGTTGCCGTTTTTTGTCGCCGTGACGTATCAACTGCACT
TCTCTGTACCCCTTGAGATAGTTTCACTATTGCTGCTACACTGCACAGTG
CTGTTCTTTCGTACACCCCTGTAGGGACGAAAGCTATGTGGAGGCCTCCA
AGAAGGGAGGGGAGAAGCATCACCCCCGTAGGCAGCTCGTGGTCGCGGGG
GACCAAGTATGGCGCAAGTTTATGAAGTGGCTGGAGTACTTGGGGCTTAA
AGCGGAGCTGCTGAGGGAAGACAGTAGCTTCGCGGACCCTGGGCGGACGC
TGTTCCTCTCGACGCGGTGTGGGTGTTATGGTGGGTAGACATGAGGGGAG
AGCTCCTTTTTTTTTCACGAAACAGCGTCATGACCGTTCCAACGTAATTC
GCTCTTCTGCTGTGTTACCGCCCCACAGGACGGCCTCGTTGCTGACCTGC
GGTCCTCCTTTCTGTCCGTTTCAAATGTTCGCTTCTGGTGTGTCACAGTG
GAACCCAAGGTATCGCAGTGTGCATGCCAGATCCACACGCAGCAGGGGAT
GTACCTGAAGGCCTTCGAGATGTTGATGCCTGCAATACATGCCAACTGCA
ACTGCACGTGCAAGTGGTGCGACGGGGGGAGTGGGTGTGGAAGTGGATGG
CCATGTGTAAAGATCTGCACAGCTTTTCTGAGGCTGTGGCTTGCGAGATG
GTAGACTTTGTTGAAGAGGACCGAGGGGGTAGGTTTGAGCACTGGGGGAG
GAAGCCCGCATACGTTGCGATTGAATGCTCCGAATGCGGGTTTAGCAACC
CTGGCAGCATCCCCATGAACTGCGATGCCCTGGGGTCTATGGCGGACAGA
GTAGTCGGGTGGCTTCGGTACAAGGATCAAGTCATGGAGGATGGGAAGGT
GCACAAGAAGCAGCGGCTACCCCAGGCTGGAAAACTGGGTGACCTGTGGC
AGGAGTTTGTGGAGCACTCCAAGAAGGTGTGAAATAATGGACCGCATGTG
GAATTGCGTCATCAACTGGAGGCGTGTAGTCAATCGTGTATCAACACAAT
CAATCGCGCAACGTACAACCGTTCTTTCCTTTCAACTTACAACTATATTT
TCCCGCCCCCCGCTTACCCCCCGTTCGTTTCTTCCCTCTCAGTATCTTCA
TCACCATGAGCTAGCCAAGT back to topCoding sequence (CDS) from alignment at Scaffold_189:458253..461022- >EsuBft468_16a-0001 ID=EsuBft468_16a-0001|Name=EsuBft468_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=258bp|location=Sequence derived from alignment at Scaffold_189:458253..461022- (Ectocarpus subulatus male Bft15b)
ATGAATGCGGCGGGATTCAATTCACAGGGAAGATCAACTCGGAGCGACCC
GTTCACCCCGCCAATCGACTCCGCTTGGTCGAATTACCCACAAAGGAACT
TACTGCAGGATTTCCCGCCCCCACCTCGACAAGGTACTGCTCATTCCCTT
CCCGTCGCCTGGACGGTGGCGGCTGCTGCCACCATGCTGAGGCGCGATAT
CAAAATTGCGGGAGAAGCGAGGGTCATCAACGCCCGCACGCCAGGGGCTA
TCACCTGA back to top
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