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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7FIC6 |
| ProteomeId | EsuBft4398_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2880.D7FIC6|- |
| Length | 108 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.63e-141 |
| EggNOG OGs | 2EJXG@1|root,2SPZB@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4398_2a-0001 ID=EsuBft4398_2a-0001|Name=EsuBft4398_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1080bp|location=Sequence derived from alignment at Scaffold_630:517532..520869+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTTCGAGGCGTTGTCAACATGGTCGCCCTAGCACGTGACAGAACTGA
ACCGGTTACAGTCGAGGGTGTGGACTACAGTGTGGCGGACCTTTACGACG
CCATGGAGAAGGAAGACAAACCGGAACTGGAGGATTCTGCCGGCGGAAGT
TCGTCGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCCGGAGG
GAGTGGCAACATCACGGAGCGCAAGGGCCCACACTGCATGATGCGGCTCG
TTGGGATCCTGTGCGAAGACTCCATCCGCCCACTTGTCATCAACAGCCGC
TTGCAGGCGACCCGGCAGGAGCTAGACACCTCAGCAGTTGGGCCGCGGAA
AAATTTGTGGCCAGAGGTCACCGACCGCTTCAGAGACCCTCGCCACAATG
TGAGAAAAATCGTGGACGACGAACAAGTGAGTCACGTCATTGCGAACATC
ATCCAGCAACCTAACATCTCGGCGGAAAAGATCACCCCCATGCGATCTGC
GGCAAAGGCGAAATGGAACACGCCTAATGCCAACTGGAAGAGTGAACCCG
GCAACAACCAGCCATGGCTTTCATTTTGCCAAGGGGACACGGACACGTAC
ATTCTCGGTTGCGCAGTCGAGAAATACCCCGAGCTTGACCAAGTGTGCAA
CAATCTCCTCCCGGAGGACGCTCAGCGAGAGGACGACAGAACCGGAGAGG
GCGATGGCTGGCGCGAGGCTTACGAGCAGAACAGGCGGGGGACGAAGCAG
AAAAAGAAGGGGGGAAGGCAGAGCGTGGCAGAGGCTACGTCCGTTGCCAT
GAAAACCGCACTCTTAGATATTGAGCCGCTCCTGCCACGTGGCGGATCGG
AGAAATCTGAGTGGCGACTGAAACAAGAGGAAGAGGAAAGCAAGTCTGCT
GCCCTCGATACCAAGGCTGCTGAATACGCTCTGCAGAAAGAAATGCGCGC
CGACCACCAGAAATTTTCGGAGCAGATTGTGGAAGAGAAGGAAAACAAGC
GGCCGGGTGACCAGACGAGAGTAAAATTCATGGAACAAATGGAAGCAAAG
CTCGAGAAGGAGATGTTTGGAGGCCAATAA back to topprotein sequence of EsuBft4398_2a-0001 >EsuBft4398_2 ID=EsuBft4398_2|Name=EsuBft4398_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=359bp
MFRGVVNMVALARDRTEPVTVEGVDYSVADLYDAMEKEDKPELEDSAGGS
SSTGGAAGPDGGGSAGGSGNITERKGPHCMMRLVGILCEDSIRPLVINSR
LQATRQELDTSAVGPRKNLWPEVTDRFRDPRHNVRKIVDDEQVSHVIANI
IQQPNISAEKITPMRSAAKAKWNTPNANWKSEPGNNQPWLSFCQGDTDTY
ILGCAVEKYPELDQVCNNLLPEDAQREDDRTGEGDGWREAYEQNRRGTKQ
KKKGGRQSVAEATSVAMKTALLDIEPLLPRGGSEKSEWRLKQEEEESKSA
ALDTKAAEYALQKEMRADHQKFSEQIVEEKENKRPGDQTRVKFMEQMEAK
LEKEMFGGQ back to topmRNA from alignment at Scaffold_630:517532..520869+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4398_2a-0001 ID=EsuBft4398_2a-0001|Name=EsuBft4398_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3338bp|location=Sequence derived from alignment at Scaffold_630:517532..520869+ (Ectocarpus subulatus male Bft15b)
ATGTTTCGAGGCGTTGTCAACATGGTCGCCCTAGCACGTGACAGAACTGA
ACCGGTTACAGTCGAGGGTGTGGACTACAGTGTGGCGGACCTTTACGACG
CCATGGAGAAGGAAGACAAACCGGAACTGGAGGATTCTGCCGGCGGAAGT
TCGTCGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCCGGAGG
GAGTGGCAACATCACGGAGCGCAAGGGCCCACACTGCATGATGCGGCTCG
TTGGGATCCTGTGCGAAGACTCCATCCGCCCACTTGTCATCAACAGCCGC
TTGCAGGCGACCCGGCAGGAGCTAGACACCTCAGCAGTTGGGCCGCGGAA
AAATTTGTGGCCAGAGGTCACCGACCGCTTCAGAGACCCTCGCCACAATG
TGCGTGCTAGGGGTAGGGGGTTGATTAGTACGGATCGGACGAGAACGTTG
TACAAAAACAGCAGTCGAAGTGTATGTTGACAACACATGTCGTTTATTGA
TAGTTATTTTTAGGCATGGTACTCAACACCTCATAACGTCCACGGACGAT
CGCGCCATCGTTTTAGGTAAAATGCCATTAGGTATCCAACCCCAAGAGCG
GGTCAACCTGCTGTTGACGTCTACCGGTAACTTACGTAGTTGTTGCTGAC
GCCGACGACCATACTGCTGTAGATACTGCTGTAAGTTGCTTCTTTGCCTA
TTATAGTGAAAGACATTGAAAACGCGCTAAATTTTTTCTAAAGAATGCAC
TGATAGCCAGACAATATTTCATGCCAGAAGAAAATAACAGGCCGGGAACT
TCCGACATTGGGCCTTCCCGCAAGAGAGGTGCATTCCCCCCGTTCTTTTT
TTTTTTCGTATCGAAATCGAGTTCAATTTCTCGCACGTCCGGGGGGCGTC
ATCNTTGCCCCTTCCCTCGCTCCCTCGCTGTATGCCTGACCTATGGGTGC
TGTGGACGTTTTTCAGGTGAGAAAAATCGTGGACGACGAACAAGTGAGTC
ACGTCATTGCGAACATCATCCAGCAACCTAACATCTCGGCGGAAAAGATC
ACCCCCATGCGATCTGCGGCAAAGGCGAAATGGAACACGCCTAATGCCAA
CTGGAAGAGTGAACCCGGCAACAACCAGCCATGGCTTTCATTTTGCCAAG
GTAAGAGATGGGTGACGTAGGGCTGGGTAAAAAACAGCGCCTGTTTTCTC
CAGGAACCTTGGGCGATTTTGTGGCCGTGGCGTCAATTGTGCCCATCGTA
CTTCAGCGTGTAAGTGCTGCTACGGTCGGAGTTTTGATATTGCACTTGGA
GTTGTCGATATTGTTGTAAAACGTACTCCCGGGATGACGTCCACCTTGTT
GTTGTTGTTGTTGTTGTCTTCACATTAAACCGTATGTCAGTTGCTAAATG
CCAACATCTAGCAAAAGACTCTCAGCCCGTCGTCACGAAAGTGCTAGAGC
CATCTGAGGATCTAAAGAACACGCACACATATAACGAGAAAAAGGTATCC
AAGAGCCCGAAGAGGTACACCTAAAAATCCCTGCAGCACCGTATGCGTGC
CCAAAAACTGAACTGCACGTCCGTCCCACCGTTCGACTACAGTAGCATCA
CCCCCTCCCTGTCCCACTCTATACCAAAACGGAAGATTGCCGACTACAGC
ATACTGCTGTCTGAAGTGCTGTCTGTACAAAAACACCATGGTAGGCATGG
AACAAGAAGCTGGCGGGGCACAAAGCTGCTGTCTGAAGTGCTGTCAGAAT
GTGTCTGCGGCCGTACAGTGAAAAAGAACAACCAACCAAAGCCATCATAG
CAGCAATTGACAATCACCCGAATCTCTCCCGATCGTCTGGGTAGGCACTG
CAGTGAAAAATATCGACACTAGCTAAGAATCGTTCCACATTGAAGGGGTC
TTCCACGATCAGGCACAAAACCAATGCACCCGGGTTAGCCACGCCATCTC
TGACGGGTCTCTCTACAAAACCGGTGACGATGGCATCACACAAAACCAAC
ACGGAAAGTCAGAAAAAAAACGAAAAAAATTGACGACACAGATAGAAATG
TTTGTCCGTGCGCCACGGGTCGATGTCGCCCGCATGCTCCGGTGCCATTG
CTCCATCCGGCGCCGCTGTAGTCAGCCCGAGCAAAACGCCACTCGACCTG
CTCCGTCCGTACACGCTCTCGTTGCTGTCCTTCCCAGTCCGTTCCTCGCT
TTCTCCCTCATTGCACTCAAGGTTCTTGGTCTGAAAAAAATAAAAATTCT
CGCGCCGAATGGTCAACCAGCCTAGTTCAGCTCGTCGCCACCTGCTCCCT
CCTCCTTTGATGGCGAAGCCAGGTTACTGAGGCAATACAGCTCCCTCTAG
CAAACCTAGGGCCGTGTAGTGCCCGTCCACCTTTCTGATGGTGTCTGCCT
CCGCGCACAAAAATGAGATGGGCATCACTGCCTACGCCGACGGCCAGAAA
GGCCCGCGCATCTACATTTTCCCGCCTGACCCCATCAGTGCCGACCCAAC
TCCACCACCACACGCACGCCTCGCGGCGGATGCGCAGCAGCAAGAAGGTT
TCGGTCATCCCTTGAGGGTGAGTCTAGCCCTGCTCGCCAGAAAGACCCCC
CCCTTCGCTACAACCCATGTCTAAGCAAAAGCTTGTCGAGGAGCGAGGGG
AAGAAGGGAGAGTACCTTGAGGCTTAATTGAAAAGGATTGTCTGCACCAT
GAACTTTTATCGTGTATTTTGAAGCAAGACCAAACACCTTTCCAATTGCT
CCATACAGACCCTCCCCGTCCGCGCTTTGCGCTTTGTTTTTTTTTTACAG
GGGACACGGACACGTACATTCTCGGTTGCGCAGTCGAGAAATACCCCGAG
CTTGACCAAGTGTGCAACAATCTCCTCCCGGAGGACGCTCAGCGAGAGGA
CGACAGAACCGGAGAGGGCGATGGCTGTACAGGCGGTGCCGAGCGCCGGG
CGGCCGCCAAGCGGGAGGGCGCGAGGCTTACGAGCAGAACAGGCGGGGGA
CGAAGCAGAAAAAGAAGGGGGGAAGGCAGAGCGTGGCAGAGGCTACGTCC
GTTGCCATGAAAACCGCACTCTTAGATATTGAGCCGCTCCTGCCACGTGG
CGGATCGGAGAAATCTGAGTGGCGACTGAAACAAGAGGAAGAGGAAAGCA
AGTCTGCTGCCCTCGATACCAAGGCTGCTGAATACGCTCTGCAGAAAGAA
ATGCGCGCCGACCACCAGAAATTTTCGGAGCAGATTGTGGAAGAGAAGGA
AAACAAGCGGCCGGGTGACCAGACGAGAGTAAAATTCATGGAACAAATGG
AAGCAAAGCTCGAGAAGGAGATGTTTGGAGGCCAATAA back to topCoding sequence (CDS) from alignment at Scaffold_630:517532..520869+ >EsuBft4398_2a-0001 ID=EsuBft4398_2a-0001|Name=EsuBft4398_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1080bp|location=Sequence derived from alignment at Scaffold_630:517532..520869+ (Ectocarpus subulatus male Bft15b)
ATGTTTCGAGGCGTTGTCAACATGGTCGCCCTAGCACGTGACAGAACTGA
ACCGGTTACAGTCGAGGGTGTGGACTACAGTGTGGCGGACCTTTACGACG
CCATGGAGAAGGAAGACAAACCGGAACTGGAGGATTCTGCCGGCGGAAGT
TCGTCGACGGGTGGTGCAGCCGGACCGGACGGGGGTGGTTCCGCCGGAGG
GAGTGGCAACATCACGGAGCGCAAGGGCCCACACTGCATGATGCGGCTCG
TTGGGATCCTGTGCGAAGACTCCATCCGCCCACTTGTCATCAACAGCCGC
TTGCAGGCGACCCGGCAGGAGCTAGACACCTCAGCAGTTGGGCCGCGGAA
AAATTTGTGGCCAGAGGTCACCGACCGCTTCAGAGACCCTCGCCACAATG
TGAGAAAAATCGTGGACGACGAACAAGTGAGTCACGTCATTGCGAACATC
ATCCAGCAACCTAACATCTCGGCGGAAAAGATCACCCCCATGCGATCTGC
GGCAAAGGCGAAATGGAACACGCCTAATGCCAACTGGAAGAGTGAACCCG
GCAACAACCAGCCATGGCTTTCATTTTGCCAAGGGGACACGGACACGTAC
ATTCTCGGTTGCGCAGTCGAGAAATACCCCGAGCTTGACCAAGTGTGCAA
CAATCTCCTCCCGGAGGACGCTCAGCGAGAGGACGACAGAACCGGAGAGG
GCGATGGCTGGCGCGAGGCTTACGAGCAGAACAGGCGGGGGACGAAGCAG
AAAAAGAAGGGGGGAAGGCAGAGCGTGGCAGAGGCTACGTCCGTTGCCAT
GAAAACCGCACTCTTAGATATTGAGCCGCTCCTGCCACGTGGCGGATCGG
AGAAATCTGAGTGGCGACTGAAACAAGAGGAAGAGGAAAGCAAGTCTGCT
GCCCTCGATACCAAGGCTGCTGAATACGCTCTGCAGAAAGAAATGCGCGC
CGACCACCAGAAATTTTCGGAGCAGATTGTGGAAGAGAAGGAAAACAAGC
GGCCGGGTGACCAGACGAGAGTAAAATTCATGGAACAAATGGAAGCAAAG
CTCGAGAAGGAGATGTTTGGAGGCCAATAA back to top
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