EsuBft420_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft420_4a-0001
Unique NameEsuBft420_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_170contigScaffold_170:142010..152162 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LHT5
ProteomeIdEsuBft420_4
Protein domainsPF13516
Protein domainsCoil
Protein domainsSSF52047
Protein domainsG3DSA
Protein domainsIPR006553
Protein domainsPTHR23125
Ownerapollo_admin@sb-roscoff.fr
Notedna repair protein rhp7 os:schizosaccharomyces pombe (strain 972 atcc 24843) gn:rhp7 pe:3 sv:1 [Automatic annotation]
Nb exon13
Max annot lvl2759|Eukaryota
Length3217
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsKOG1947@1|root,KOG1947@2759|Eukaryota
Ec32 ortholog descriptionHypothetical leucine rich repeat protein
Ec32 orthologEc-18_000380.1
Date last modified2016-06-14
Date creation2016-06-14
KEGG rclassRC00062,RC00189,RC00676,RC01052
KEGG koko:K00276,ko:K10272,ko:K15082
KEGG ReactionR02382,R02529,R02613,R03139,R04027,R04300,R06154,R06740
KEGG Pathwayko00260,ko00350,ko00360,ko00410,ko00950,ko00960,ko01100,ko01110,map00260,map00350,map00360,map00410,map00950,map00960,map01100,map01110
EC1.4.3.21
DescriptionF-box LRR-repeat protein
COG categoryB
BRITEko00000,ko00001,ko01000,ko03400,ko04121
Cross References
External references for this mRNA
DatabaseAccession
GO0044267
GO0044699
GO0044424
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4aEsuBft420_4aEctocarpus subulatus male Bft15bgeneScaffold_170 142010..152162 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4a-0001EsuBft420_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_170 142046..151288 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4a-0001-exonagat-exon-29255Ectocarpus subulatus male Bft15bexonScaffold_170 142010..142219 +
EsuBft420_4a-0001-exonagat-exon-29259Ectocarpus subulatus male Bft15bexonScaffold_170 143265..143606 +
EsuBft420_4a-0001-exonagat-exon-29262Ectocarpus subulatus male Bft15bexonScaffold_170 143906..144115 +
EsuBft420_4a-0001-exonagat-exon-29256Ectocarpus subulatus male Bft15bexonScaffold_170 144768..144893 +
EsuBft420_4a-0001-exonagat-exon-29260Ectocarpus subulatus male Bft15bexonScaffold_170 145421..145539 +
EsuBft420_4a-0001-exonagat-exon-29253Ectocarpus subulatus male Bft15bexonScaffold_170 145857..145926 +
EsuBft420_4a-0001-exonEsuBft420_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_170 146267..146483 +
EsuBft420_4a-0001-exonagat-exon-29257Ectocarpus subulatus male Bft15bexonScaffold_170 147115..147278 +
EsuBft420_4a-0001-exonagat-exon-29261Ectocarpus subulatus male Bft15bexonScaffold_170 148083..148196 +
EsuBft420_4a-0001-exonagat-exon-29263Ectocarpus subulatus male Bft15bexonScaffold_170 148608..148766 +
EsuBft420_4a-0001-exonagat-exon-29254Ectocarpus subulatus male Bft15bexonScaffold_170 149483..149815 +
EsuBft420_4a-0001-exonagat-exon-29258Ectocarpus subulatus male Bft15bexonScaffold_170 150187..150264 +
EsuBft420_4a-0001-exonagat-exon-29264Ectocarpus subulatus male Bft15bexonScaffold_170 151088..152162 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4a-0001-exonagat-five_prime_utr-9847Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_170 142010..142045 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4a-0001-cdsEsuBft420_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_170 142046..142219 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft420_4a-0001-exonagat-three_prime_utr-15468Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_170 151289..152162 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft420_4a-0001 ID=EsuBft420_4a-0001|Name=EsuBft420_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3217bp|location=Sequence derived from alignment at Scaffold_170:142010..152162+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ACCCAACTCAACATGCCTCGTTCGTCGCGGACCTCCATGGGCAAGGGACG
CACCGACGGCGATGAAGGTTCGTCGCCAGCTGCTGCTACCCCCCGCAGAA
GAAGCCCGCGTGGTTTGAATGGGAGCGACGGCAGTGTCTCTTCTGTCCCC
GCTGCCGGCGGCCCGCGAAGCAGGAGGGCCGGTCGAGAGGCCAGCACCAA
GGCACCAAAGTCAAGGAAGCAGGGCCCGAGGGACTCCCCATCTTCCGCCG
GCCACTCGTCCGTTCCACTGGAAAATCCGCCCTCGTCTCCTCCAGAAGGC
ACGGCGGTCGCTAGCAGCAGCAACGGGGTTCAGCGTCGCACAGCAGCAGC
AGACGAAACCGTCAGCGGGAGCACCGCCGCCTCCGGCACCGGTGCAACAC
CCGTCGTGGATTCTTCGGATGTGGCCGGAGTGGCGGAGGAGGAGGAGCAC
GAGGAGGAGGAAGAAGAAGAAAATGCGCGGGCGGAAACGGGGGGTAACAC
AGCGGCTGACGGCGTGCCGGCGGTGAACTCCAGAAGGGAGGCGTTTGCCC
AGGTAGCTCGTGCCCGTGGAGCACACTTCGCCCGTCCCGAAAAACCACCT
GCCCCTGGCACTGCCAGAGCAGGGGCGGCAGCGAGAGGTGCCAGTAGCGG
CAGCGGTGGGAGCGGACGGCGGCGGGGCGCTGCTGCTGATGCTGCTGCAG
CCGGAGAGGGTGATGATGCTCCGAAGGAGCTATGGCCTGGCCCCTTCGCC
GAAGCACGACGTCTGATGGACAACCGCGAGGCGGCGGCCGCTCTCCGAGA
GTCTATTCGGGTCAACGGCAAGGCCCAGGCAGCTTCGGACGAGGACGGCG
ACAGCGACGACGATGAGGAGACGCCTCCCCCTATCAAGGTGGACTGGAAA
CCCACGGGGAAGGGGAGCAGAAGTGGCAAATCGCGGGCCATCCCCTCGTT
GTTTCGCCTTTGCCTCGACCTTCTGGCGGACAACTTCGACCACATTGAGT
CTCTAGGGGACGTGTCGCCCGAGGTTCGTAACCACCTGGCTGCGGTCATG
TGCCGCCAGCTCAAGTTAACCACGGAGGCCCTGCAGAGGCTTTCTGAACC
CGGGGTAACCGAGATCATCCTCCCCGACTGCAGCCGCATCGAGCCCGACC
AAATGCGCGACTCCATCCTGCAGTGCCGACGCACCCTCAGGGTCTTGAGG
CTCGGCACATGCGGCCGGTGCATAGGAGACGCCACGCTGGAGGCCCTTAC
GAAGGCCGGGGGAGTTCCAAGGTTGGAGATGGCGTCCTTGGCGGGCACGT
ACCAGCTGACGGACACTGGTGTGCTGGAGCTGCTGCGCTGCTGCCCGAGA
CTCACCGGGCTAGAGCTCTCCGCTAACTCGCGCATCACGCTCAAGGCCCT
CGAGAAGATGGTCGACAAGGAACGGCCCATTGGGATGGCACTGACGACAC
TCTCGTTGACGGATTGCATCCAGCTCGGGCCAGACGAGCTGGAGCCGTTG
AAGGGAATGGCCTGCCTGGAGAGGCTTTCTCTCAGCGGGTTAGCCAAGCT
CACAGACGGAATCCTCCTGCAGATCTTGAAGGCGTGCGGCGGACGGTTGC
GCCACCTGGACATCTCGGACTGCACGGACCTTACCGACGCCACGCTCAAA
GCCATAGGGGAGCGGTGCGGGGTCCTGGAGTCGCTCAACCTTGGCCTGTG
TCCCCTCCTCACGAGTGGTGCAATCCAAGAGATTTTTCAGTACAGCGGGA
GCTCTGCAGAGGCGTCGACGGGGCGCCTCGCGCAAAATCCAAGCGCTACA
ACCGCCCAAGACGATGGTGACATCAACCCCGCCAGCAGTGGCGCCGGGGG
CGCTTTGAAGGGGGAGGGGAAAGGTAAGGGGAAGGGGAAGGGGAAGGGTA
AAGGTGCGGCGGTAACCGCGTCTGTGGCTGCGGTACCGCGGTCAGCTTCC
GCCGCAGACGGGGGCGATGGGGGTGGTGCACGGCTGGGACACACCATGCT
CAAGTCGAGGCTGACGAGCGTGTCTTTCCGAGGGCTGGTGCAGGTGGACG
ACAAGGCAGTGGAGGCGATGGCGGCCGCGTGCTCTGGCAGCCTTCGCTCT
CTGGACCTGAAGGGACTGGCTCTCATCACGGACAGGAGCCTGGTGGCGCT
TGCGAGGTACTGCTCGTCATCGTTGGAATCGTTGGACCTGTCCTTCTGCA
GGTCGGCCACCGACGACGGCTTGGGGCACCTGGTGGACGCTTGCGAGGAC
CTGAGGTCTCTCCGCCTGTGGGGGTGCATGCAAGTCACGGACCGCTTCCT
GAGGGGGCACAGCAAGGAGGAGCTCGTCATCTCGCGCTACTGAGGGTCGG
CCGAAGCACAGCGGTGCGCTCATCTCGCAACACAGCAGGAACAGGGGCAC
ATAAATTTGAAAGGGGAAAAGGAACGTGATGCTGGCACTCCACGCGCCAA
GGGGGAGGGGAGGGGGGGTGTCGATCGGAGAAGGAGGCCGTGGGGCGCTT
GCTTGGTCGAGGCTGGTCGAGGAGAAGGGGGGCTCCGCAGAATGCTGTCC
TGGTTTCGTTCGAGGTTGCAGCGCGTGCATGTGTACGCGTGTGCTGGCAT
CTTGCAGCAGCTGTGTACTGACTGTAAAGACATCTGTAGCCTTGTTTGGT
TTGGTGGATACTGCTGTGACACGTTTGGATGTACCGATCTCGGAGGAACA
CTCCTACAGCACAATCGGTAGCTGTTGGGGGACTGAGCTGCCGATCGAAC
ACTCCGCCGGGGGACACAGCAGTAATTGTTAGCATTTTTTTGGTTATTCT
CGTGAATATCATTGTGTGTAACGTCCGGAGCGAAAGCGAATGGATGAAGT
CATGTAAGGAAGTCGCACCCCCTCGTACTGGAAGTGGGAAGGAAACATTG
TTTTTTGCTGTAGAGGGAGATGGTGTCATTGGCGATAGGAATCGAGTTGC
GTAGGTAAGGGACGAGTTGACCCCTCCCGCGCCGCGTTGTTGTGCGTGTT
TTCGTCAACGCCGCGCACGGCTCTTGAGACCGTCTATTCTGTCGCCTTCT
GTGCAGTAGCTGCCACTTTTTACCAAGGGTGCGTCGTGTTCAGAAAAAGT
AAGTCACTTGCGCACGGCTTGCCTTGTCCGGTGTACAGAATGAGGTGAGC
AACGAATTATAGGCACATGCGAAACATGAGGAAATACGGAATTACAGACT
ATTTACCCCCTTCTTCT
back to top

protein sequence of EsuBft420_4a-0001

>EsuBft420_4 ID=EsuBft420_4|Name=EsuBft420_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=768bp
MGKGRTDGDEGSSPAAATPRRRSPRGLNGSDGSVSSVPAAGGPRSRRAGR
EASTKAPKSRKQGPRDSPSSAGHSSVPLENPPSSPPEGTAVASSSNGVQR
RTAAADETVSGSTAASGTGATPVVDSSDVAGVAEEEEHEEEEEEENARAE
TGGNTAADGVPAVNSRREAFAQVARARGAHFARPEKPPAPGTARAGAAAR
GASSGSGGSGRRRGAAADAAAAGEGDDAPKELWPGPFAEARRLMDNREAA
AALRESIRVNGKAQAASDEDGDSDDDEETPPPIKVDWKPTGKGSRSGKSR
AIPSLFRLCLDLLADNFDHIESLGDVSPEVRNHLAAVMCRQLKLTTEALQ
RLSEPGVTEIILPDCSRIEPDQMRDSILQCRRTLRVLRLGTCGRCIGDAT
LEALTKAGGVPRLEMASLAGTYQLTDTGVLELLRCCPRLTGLELSANSRI
TLKALEKMVDKERPIGMALTTLSLTDCIQLGPDELEPLKGMACLERLSLS
GLAKLTDGILLQILKACGGRLRHLDISDCTDLTDATLKAIGERCGVLESL
NLGLCPLLTSGAIQEIFQYSGSSAEASTGRLAQNPSATTAQDDGDINPAS
SGAGGALKGEGKGKGKGKGKGKGAAVTASVAAVPRSASAADGGDGGGARL
GHTMLKSRLTSVSFRGLVQVDDKAVEAMAAACSGSLRSLDLKGLALITDR
SLVALARYCSSSLESLDLSFCRSATDDGLGHLVDACEDLRSLRLWGCMQV
TDRFLRGHSKEELVISRY
back to top

mRNA from alignment at Scaffold_170:142010..152162+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft420_4a-0001 ID=EsuBft420_4a-0001|Name=EsuBft420_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=10153bp|location=Sequence derived from alignment at Scaffold_170:142010..152162+ (Ectocarpus subulatus male Bft15b)
ACCCAACTCAACATGCCTCGTTCGTCGCGGACCTCCATGGGCAAGGGACG CACCGACGGCGATGAAGGTTCGTCGCCAGCTGCTGCTACCCCCCGCAGAA GAAGCCCGCGTGGTTTGAATGGGAGCGACGGCAGTGTCTCTTCTGTCCCC GCTGCCGGCGGCCCGCGAAGCAGGAGGGCCGGTCGAGAGGCCAGCACCAA GGCACCAAAGGTATGCAAGACACCATGATCATGATGATGTGCGTCTTAGG CCTGTGTTGGCGATGCGAGCGAGCTTCAGCGCGAAGTGGAGGTACCTGAA GCTGGCGCCGCTGCTGGGCTTTCAAAACGAGCCTGTCTGTAAGTTTGTGT ACAGCGCTGGTTTGTACCAGTAAACCCCGCGCTGTGCCTCTCGACTTTGA ACCACCGCCGCGTGTGTGTGCATGACTATCTTTGGTTGCATTCAACGACA TTGTCCCTTGATGTAGAACTGTGTTGACAGTAAGTGGGGAGCTCTACGGG AAAACCAATGCATGTCGTCAGTTATCCTTCGCGACATCGCTTGTTCGGCA TCGGTCTCAAGAATAGTCTACATGATCCCCTTCGCATGTTTTCTCAACGA GGCCTTACATATATCTCGGTGACATCAAGAAAACAATTTCGAACGATATC GTGCTGCGATAAGCGTTTGGGCGCTGAACAAGATTTGGGGATCGAGAGTA CGCGAATCTACAGCGACAGGCATTGCGAGCTTCGGCCGCAGAAATAAACT GCTTCGAAGCATGACCAAACTGCGCGCGAAAAGGGCGCCAGCAGACCGCC AATTTGCATTTTGGTTCTTGTACGCAGCTGGCTGTACGTATTTCTGCGGG ATCGTCCATATTTGCTGTACCTTTCGGTCCTTTGTTTTTTTGTGCACGAG CGTAGACCCGCCTGAATTCGATACTGCCTTCGAAGAGCCCGGCGTCACTA CGCCCCCAGCTACGTCGATGTGCTAGATACTTCAGTTACACCTGGTCTGC TTCGTGTCACTGCGGCTCAAAAATGGCCCTAGTATGGACTGGGAACCTCG TTGTTTTGGCCGTTGAGATCCTCCAATTTTCCTCTTAATCCATGGTTGTT GAGGTAATCAAACCACACGGGAGATGAGCAGATCCTCACATGCCGTCCGA TCCAATGCCCTTTCCGTCGACGCAGTACAGTAGTAAGCATGCCTCTGCTC GCCCCTTGTAAGTCTCTGCTCGTTCTCCCCATCTTTCATGGCCTTACCAA TGCAGTCAAGGAAGCAGGGCCCGAGGGACTCCCCATCTTCCGCCGGCCAC TCGTCCGTTCCACTGGAAAATCCGCCCTCGTCTCCTCCAGAAGGCACGGC GGTCGCTAGCAGCAGCAACGGGGTTCAGCGTCGCACAGCAGCAGCAGACG AAACCGTCAGCGGGAGCACCGCCGCCTCCGGCACCGGTGCAACACCCGTC GTGGATTCTTCGGATGTGGCCGGAGTGGCGGAGGAGGAGGAGCACGAGGA GGAGGAAGAAGAAGAAAATGCGCGGGCGGAAACGGGGGGTAACACAGCGG CTGACGGCGTGCCGGCGGTGAACTCCAGAAGGGAGGCGTTTGCCCAGGTC TGTGGCGAAGTCGTCGACACTCATACCGCCGCCACCATTAATTCACACTG TTTTACTCTTGCCTCCATTTACCTCCACTATGCATATCATGTGTAATGAC AGCCAGCTGCAAGATGTGTCCATCCCTCTTGAGGGTATAGTTCAGGGGAT GGGGGTGGTCAGGCGGCCGAATTTGTTTTTTCCTTCACCCACAGCAGCGT TGAGGGGAACGATGCCCCACAAACATAGTGTCGCTGCGCCGCCGACAATG CCTCATCGTTACCCTGCGCTTCTTTCCCGCTACTGTGGTGTCTCAGGTAG CTCGTGCCCGTGGAGCACACTTCGCCCGTCCCGAAAAACCACCTGCCCCT GGCACTGCCAGAGCAGGGGCGGCAGCGAGAGGTGCCAGTAGCGGCAGCGG TGGGAGCGGACGGCGGCGGGGCGCTGCTGCTGATGCTGCTGCAGCCGGAG AGGGTGATGATGCTCCGAAGGAGCTATGGCCTGGCCCCTTCGCCGAAGCA CGACGTGTAAGGGTCGTAGCGTTATTGTTGCTGCCGTCGGTTTCATGGGT GGGTGTGACGCTTGGTTTGGCTTTTGCGCCGAGGTTCGTGACAGTGAGAG ATTGAAGCGTTCGGGAATGAGGTACGAGACACTACTGCGTACACATGCAC CGGCAGCCTTGAGGCATGCGATCAAACTTATCCACACTACGTTCTAATAC AACGTTTGAATCGATTAAACCTGCTCTTTACTAGTAGGGGGTGTTAGTCC CGGAGCCTCGACACAAGCAACTCGTTGGTTGTCTGTGTTTGTTACCCTAC CGCTCAGGCAGGAATTGGCCTTATACGGTCTTTCTACAATACGGGTAATA TCCCCGAAACGAAATTTTGGATGTGGGATGGGAGGTGGATACATGTGTAT CACCTGCCTCGTGATTTGGCACAAAATCCAAGTGAAGCCGCGTTCTTGTC CCTGCGTCATTCAAGCCAAAGGAAATCGTTCGGTCCAAAAACAATCTTGT TCGTGGTCCCTGCCCTGCGTGCGAAATCTTGATGCGGTCTCCTGCTCGTA CAAATTCTCGTTGGTGACCACACACCTTGCTGTTTGATTTTCCCATCGCG AACAACATCATGTGGCGCGTAACGTCCGTACGTATCGTGTGCACACCGCC TGCTGTAGCTGATGGACAACCGCGAGGCGGCGGCCGCTCTCCGAGAGTCT ATTCGGGTCAACGGCAAGGCCCAGGCAGCTTCGGACGAGGACGGCGACAG CGACGACGATGAGGAGACGCCTCCCCCTATCAAGGTACAGAGTATGAGTT GTTTCATGTTGTTAGCGACAGGACGGCTTTCGGTCACTCGCGGGGTTTGA CGTGTATTGATGCTGACGTCTCCCACGCGCACGTGCCTGCGCTGGTTACG GGATTGCAACGTTTTTGGTAAGAATCACGCCCAATAAAGAGTGTGAAGAA CGTGATGAGTTCACTTTTCTTCGTCTTAACAACGAAAGTGGCACGATCTG CGTGCCACTTTTCCATTTCTCGCCGGTCGGATCATTGACTTAGTTTGGAC ATCGACCTCTCGCTCTCCACACTTTTTACCAAGCAACCCCCCCTCTCGCA AACACACCCCACCTGCCCCCAATTTGACCAACCACTCCCCCCCCCCCCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNCCCCCCCCCCTCTCCCTCGCTAACACATTCCACGTGGCC CGTTGCTCCAGGTGGACTGGAAACCCACGGGGAAGGGGAGCAGAAGTGGC AAATCGCGGGCCATCCCCTCGTTGTTTCGCCTTTGCCTCGACCTTCTGGC GGACAACTTCGACCACATTGAGTCTCTAGGGTGAGGACAGGCCTAGACAC TGTCCTTTGTGCGGAGCATGGACGGCCGTATTGATTCTTGGTCTTGGTCC GCATGGTCTTGGTCCTCATGGTCTCTTCCGGGTTGGCTTCTGCAGGAATT GTCTCAGTCAGGGCGGATGCGCCTCTGTTTTTTGTCCTAGACGAAGGTGT CCGTACTTTTCGGATCTCTAGCATGCCGTCGTTGAAGCAGCATCCACAAT CTTTTTCTCTCTTAAATTCAATGCCACCCGAAGAGGACGAACTTGTCCAT GTGCACCGAAAATAAACCCGGCTACCTCCCATTCCTTCCATTCGCAGGGA CGTGTCGCCCGAGGTTCGTAACCACCTGGCTGCGGTCATGTGCCGCCAGC TCAAGTTAACCACGGAGGTATGAATGATTTTCGGTGCAAGCGGTGTATGC GTTTTTGTTGTCTGTTCGCAATTGAACACTCCGGCGTAAAATCTTCGGAG CAACAGGCTTGATGTCAGCAGCAGATTGTAGGACAATGTCTACTACCACG CCCACAATACCCCGTTTCTTATCAAGTACCGGCGCATTGTTGCAGAGAAC GCCAGACCACTTCCTGACAGGGCCCTGCACATCGTCCGTGATTTCGGAGT CAGCATGTCGTACCCTGCTTGCAGAAAATACCTGTGCTTCTCTCTTCGCG CTATGTTCCTCAACCGGGCATTGTTGCGCACCCCTTCCTCCCCTCCCGCC CGCGCAGGCCCTGCAGAGGCTTTCTGAACCCGGGGTAACCGAGATCATCC TCCCCGACTGCAGCCGCATCGAGCCCGACCAAATGCGCGACTCCATCCTG CAGTGCCGACGCACCCTCAGGGTCTTGAGGCTCGGCACATGCGGCCGGTG CATAGGAGACGCCACGCTGGAGGCCCTTACGAAGGCCGGGGGAGTTCCAA GGTTGGAGATGGCGTCCTTGGCGGGTGAGGCGGGTGTGTGTTTTCTTGCC GGGAGCGAGATTGAGTTTGGTTCTGATGCTTTTCCAACGCTCTGGCCCCA CCTGCCATCCAACAAGTTACGGCTCATGGAGGCGTTTTTATTTCATCGTC GTGACTCAGCCTGCGGTACAAACAGGGTGCGGTTTTGTGACAGCTTTTTT TTTCGTCGCTGATTAGGTTCAATCTGCCGTTCAAGCAAAGTAAACATCTG CAAGTGTCCTAAGTTGTACAAGCAACTGCTCGACTATGGCTGGGGGTTCA TTTTCCCCTCAATCATGGATGCTCAATAACACCAGACCGTTGCACGCAGT TGCAGCATCCCCTTGGCTCATGGCCACTCTGTACCCACACTTCAAAGGTG TGGGAGATCCACTGCGTACTTTTTGTTGATCATCCCGGCAGGAATCTGAC GTCCATCTCCGGAGATCTATCTCGCCTTCGGGCATTTCTGACGCACTGAA ACTACCGTAGCGCCCAACATTAATTCCCCTTACTCTCTCTCTCTTCAAAG CCCAAACATGCAGCACTCCCTACAGCTTAAAGCTAGCTCTCGCGCCGTCG CTGCTGTCACGTCGTGTTGCTCCCGCTAACCGGCGGCGAACGTTGTCCCG AGAAGGCACGTACCAGCTGACGGACACTGGTGTGCTGGAGCTGCTGCGCT GCTGCCCGAGACTCACCGGGCTAGAGCTCTCCGCTAACTCGCGCATCACG CTCAAGGCCCTCGAGAAGATGGTCGACAAGGAACGGCCCATTGGGATGGC ACTGACGACACTCTCGTTGGTGAGAGGTAGTAGTGCAACAGCGTGCCCTT GCTGGCTATTTTCTAGAAAATATGTATTCTACCCGCTCGAGATAATCCCA CAGAAGGGGGGGTGTTGAATGAAGTATTTGCAGTGAATTGGAAGAGTTCG TTATTCTCTGGCGTGTTGGGAGACGCCCCCGAACCCGGGTGTGCGATGCC TCGATAAACGGGGTGCAGCCCGATTCAGTTCCCTGTCCCAGCGCATCCAT GTTGGGTCCATCGGTTGAACCCAAGCGGGGTGCTGCACCCCAACGCTATT GATCAGATATGTGCATGTCTACCTGAGGTGTGCGCGGCCATTGTTTGGAT CTTTGTTCACCGTAGTATCGTTATTGGTTCGAGTCAATGTCTACCCGTGG GCATGTGGGCCTACCGTGGTATCGTACCTGGTTTGGGTCCATGTCTACCT GGGCAAAGGGAGCTTCTTTTATGAGATTCCACGATGCTGGACGGGGTGAC CTTCCTCCCCTGCCCTACCAGGGCCGGTGACGCCAGAAGGGGCGTCGTCT TGACTCCACGGAGAGAGCGTTTATGACGAACGTTACGGGCATGGACGTTT TGAAGCACCCTCCAACTCTCTCCCGCACTGCATATTCTCCTATCCCGCAC AGCATCCTCCAAACATCTACACGGAGCGTGGAGGCGTGTGGTCTCCGTCG TAACCCCTGATGCATAGATCACCTCAACCGTTTGCTTTCCCCTCTCTTTG CGAGGTGGTAGCTCTTTGTTTGCTGTCCCTTGCTCCCTGTTTACTGTCCC CGCGACTCCGATTGCGATGTCAGACGGATTGCATCCAGCTCGGGCCAGAC GAGCTGGAGCCGTTGAAGGGAATGGCCTGCCTGGAGAGGCTTTCTCTCAG CGGGTTAGCCAAGCTCACAGACGGAATCCTCCTGCAGGTAAACTAAGTGC AGGTATAGAATCTTTGTTCTGTTGTCATTCATTTTACTGTGTCTAACACA GCCTGGGGGTCGGGCAGAAACACTTCCTCTCTCTCGGCCCTACTCACAAG AAGTAGCTTTCTGCGGGGACAAATTTTTCGGTGATGCGCTGTGCCCCCAA GTTCACAACGACCAGGCTAAGCAGCCCTCTTTTGGGATGCACCTGGAAAA TAGAAGTACTTACGGAATCTAACCTAACCCCACCACCGTCCACATGCCTG ATTCTTTCGCCCCATTCTTACCCTAAACATCGTCCACACGCCTGTCTCTT CCACCGCTTTCTAACCCTTATCATCGTTCACAGACGTTCGTATCTCTATC CCCCTGTTCTTCTACCCATTTAACCCGGCGCGTCTGGGTTTCCTCCAGAT CTTGAAGGCGTGCGGCGGACGGTTGCGCCACCTGGACATCTCGGACTGCA CGGACCTTACCGACGCCACGCTCAAAGCCATAGGGGAGCGGTGCGGGGTC CTGGAGTCGCTCAACCTTGGCCTGTGTCCCCTCCTCACGAGTGGTGCAAT CCAAGAGGTGAGAACGATGCAGGCGCGAGAAGCGGCAATGCTGCTGAGGT AGATTCCGCTTTGCGCGTGGGATCCCGGGTGCCTGGGTTGCGAAGGGCGT TTTTTCCCCGAGACTGCTGTGTCGGCAACGATGGGCACGTGTCTCCTGCT CGCCAGTGGTGGCTCCTGGATGTAGCTTCTAGCCGGCGGTTCCTCATGCT GAAACTTGATCCCTCCAACGCTGCAGGCGGGACGGGTGTAGCTTCTAGCC GGAGGCTTCCCGTATTAAAACCTTTTTGGGGGCTTGATCCCCCCTACTCT ACAGGTAGGCAGGATGCCTATCGCGTGCTTGTGTAGGGCTGCCCCCTCGT TGCACGTGCTTTTGGACCGCAGCTAGGGGGATGCGTTACTGTAGCATTGA GAGCATGCGACGGCACGTGTCGACCCTAGCGTGCCCCCGCCCCGCTGCTC CTTCTGCTCGGTTCTACCATACCCCCACCCAACCCGCCGCTGCCGTGTTT TTGGGGCCTACTCAGTGCTTGCTTGGGATGCGAACGAACGCTGGTGGGCG TACTCTTTGGAAGGCGTGTTTCTTTCCCCTTGGAAGGCGTGTTTCTTTCC CCTGGAAGGCGTGTTTCTTTCCACCTTGGAGTAGACAACGTCCCAAATTA GGCATAGCCACATCCCGCATACACACTCTCCTCCGCTTTGCCCCTCCGCA CAACATCACCCCCTTCCTTTCAGATTTTTCAGTACAGCGGGAGCTCTGCA GAGGCGTCGACGGGGCGCCTCGCGCAAAATCCAAGCGCTACAACCGCCCA AGACGATGGTGACATCAACCCCGCCAGCAGTGGCGCCGGGGGCGCTTTGA AGGGGGAGGGGAAAGGTAAGGGGAAGGGGAAGGGGAAGGGTAAAGGTGCG GCGGTAACCGCGTCTGTGGCTGCGGTACCGCGGTCAGCTTCCGCCGCAGA CGGGGGCGATGGGGGTGGTGCACGGCTGGGACACACCATGCTCAAGTCGA GGCTGACGAGCGTGTCTTTCCGAGGGCTGGTGCAGGTGGACGACAAGGCA GTGGAGGTGAGAGGGCCAGGTGTGTCCATCAAGTGAGGTGATTTCGTCCT CAAAAGAACCTTCATCACCGTCGAGTCTAGATCTTGCTTAGCCCTGAACG CCATCTCCAGCCGTGAACGTTTGCATGCCACGGAGCCCTGTTGGTGTCGT TGTCGTCGTTGCGAATGCTGTCCAAGTTTCGAGGGGCGGGGGAATGGCAG TTTCCGTTGCCCGCGGACGACCCACGCAACAACCCCACTGCTGTCTACAC CGACCTCTGCTCCTTCACTCTCCCCACTGTCCTCCCGTCTTCTCGACTTC CCTCTCCCCGTCTGTGTGTGCGTTCTGTCGTTCCACTTGGCCACGTTCTT TCTTCGATTCCGCCGCTGCGTATGTAGGCGATGGCGGCCGCGTGCTCTGG CAGCCTTCGCTCTCTGGACCTGAAGGGACTGGCTCTCATCACGGACAGGA GCCTGGTGAGACACGGTAGTGAAGACTATAGAAGTCGCGATCAGTTTCGG GAGAGACAAGCACAAACATTTGGTTTCGCGTCCCTTGGAGCCGCCTTCGG CAGCGCTTTGTCTAGCGACTACCATTACTCGCTTTCCCTCCGATATCAAC CTTTTACCGCCTTTTTATTTTGGCCGGGTGGATCATATGCCCTGACTGTC CTCAACTGCTCTGTCTCCAAAACATCACAGCTCCCCTCCGCATCTTTGTC CAATCCTACGTTGCACACACACCGCCTGGTTGTTGCACACACACACCGCC TGGTTGTTGCACGTAGAATCCCATGTTCCAAGCAACTCAAGTCCGGAACC TCTTTGTGCTCGGTTTACGAAAGGGCGTGTGCGTGCCTGTGTAGGAATGT TTTCGCGCTCCGTTGTCGCGTCTTCGCGGTTCACGATGGAGGGGCTCTTC GAGGCGCCGCCCGTCCGCTGTTAGAACCGTCCCGCTTTTTCAACCCTTGC GGTTTCTGCCCACCACTCTTTGTCGAGCACCCCGAACCCAATCTGCCTTC GGGTGCGTCTATGGTTATGTTATTGTCATGCTTTCACACTGGAACTCCTA CTCGTTTCGCGGGCTCCGTTGCTGTGTCTGGAGATCCTCCTCCAAATCCG TTCCTCCATGTGTAGGCGTGTCTGCACCAGGGGGTAGGAACGGTGTCTTG CCTCGAAGTCGCCGCGTTGTTTCAATGTGGCCGAAATCAAGCACCCATTC GTTAAGCTGCGCTGAGTTCCACCGCCTACCCGGCCGCGCTTGACCATTCA CCACCACTGCCATCGGCACGCGCAACAGGTGGCGCTTGCGAGGTACTGCT CGTCATCGTTGGAATCGTTGGACCTGTCCTTCTGCAGGTCGGCCACCGAC GACGGCTTGGGGCACCTGGTGGACGCTTGCGAGGACCTGAGGTCTCTCCG CCTGTGGGGGTGCATGCAAGTCACGGACCGCTTCCTGAGGGGGCACAGCA AGGAGGAGCTCGTCATCTCGCGCTACTGAGGGTCGGCCGAAGCACAGCGG TGCGCTCATCTCGCAACACAGCAGGAACAGGGGCACATAAATTTGAAAGG GGAAAAGGAACGTGATGCTGGCACTCCACGCGCCAAGGGGGAGGGGAGGG GGGGTGTCGATCGGAGAAGGAGGCCGTGGGGCGCTTGCTTGGTCGAGGCT GGTCGAGGAGAAGGGGGGCTCCGCAGAATGCTGTCCTGGTTTCGTTCGAG GTTGCAGCGCGTGCATGTGTACGCGTGTGCTGGCATCTTGCAGCAGCTGT GTACTGACTGTAAAGACATCTGTAGCCTTGTTTGGTTTGGTGGATACTGC TGTGACACGTTTGGATGTACCGATCTCGGAGGAACACTCCTACAGCACAA TCGGTAGCTGTTGGGGGACTGAGCTGCCGATCGAACACTCCGCCGGGGGA CACAGCAGTAATTGTTAGCATTTTTTTGGTTATTCTCGTGAATATCATTG TGTGTAACGTCCGGAGCGAAAGCGAATGGATGAAGTCATGTAAGGAAGTC GCACCCCCTCGTACTGGAAGTGGGAAGGAAACATTGTTTTTTGCTGTAGA GGGAGATGGTGTCATTGGCGATAGGAATCGAGTTGCGTAGGTAAGGGACG AGTTGACCCCTCCCGCGCCGCGTTGTTGTGCGTGTTTTCGTCAACGCCGC GCACGGCTCTTGAGACCGTCTATTCTGTCGCCTTCTGTGCAGTAGCTGCC ACTTTTTACCAAGGGTGCGTCGTGTTCAGAAAAAGTAAGTCACTTGCGCA CGGCTTGCCTTGTCCGGTGTACAGAATGAGGTGAGCAACGAATTATAGGC ACATGCGAAACATGAGGAAATACGGAATTACAGACTATTTACCCCCTTCT TCT
back to top

Coding sequence (CDS) from alignment at Scaffold_170:142010..152162+

>EsuBft420_4a-0001 ID=EsuBft420_4a-0001|Name=EsuBft420_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2307bp|location=Sequence derived from alignment at Scaffold_170:142010..152162+ (Ectocarpus subulatus male Bft15b)
ATGGGCAAGGGACGCACCGACGGCGATGAAGGTTCGTCGCCAGCTGCTGC
TACCCCCCGCAGAAGAAGCCCGCGTGGTTTGAATGGGAGCGACGGCAGTG
TCTCTTCTGTCCCCGCTGCCGGCGGCCCGCGAAGCAGGAGGGCCGGTCGA
GAGGCCAGCACCAAGGCACCAAAGTCAAGGAAGCAGGGCCCGAGGGACTC
CCCATCTTCCGCCGGCCACTCGTCCGTTCCACTGGAAAATCCGCCCTCGT
CTCCTCCAGAAGGCACGGCGGTCGCTAGCAGCAGCAACGGGGTTCAGCGT
CGCACAGCAGCAGCAGACGAAACCGTCAGCGGGAGCACCGCCGCCTCCGG
CACCGGTGCAACACCCGTCGTGGATTCTTCGGATGTGGCCGGAGTGGCGG
AGGAGGAGGAGCACGAGGAGGAGGAAGAAGAAGAAAATGCGCGGGCGGAA
ACGGGGGGTAACACAGCGGCTGACGGCGTGCCGGCGGTGAACTCCAGAAG
GGAGGCGTTTGCCCAGGTAGCTCGTGCCCGTGGAGCACACTTCGCCCGTC
CCGAAAAACCACCTGCCCCTGGCACTGCCAGAGCAGGGGCGGCAGCGAGA
GGTGCCAGTAGCGGCAGCGGTGGGAGCGGACGGCGGCGGGGCGCTGCTGC
TGATGCTGCTGCAGCCGGAGAGGGTGATGATGCTCCGAAGGAGCTATGGC
CTGGCCCCTTCGCCGAAGCACGACGTCTGATGGACAACCGCGAGGCGGCG
GCCGCTCTCCGAGAGTCTATTCGGGTCAACGGCAAGGCCCAGGCAGCTTC
GGACGAGGACGGCGACAGCGACGACGATGAGGAGACGCCTCCCCCTATCA
AGGTGGACTGGAAACCCACGGGGAAGGGGAGCAGAAGTGGCAAATCGCGG
GCCATCCCCTCGTTGTTTCGCCTTTGCCTCGACCTTCTGGCGGACAACTT
CGACCACATTGAGTCTCTAGGGGACGTGTCGCCCGAGGTTCGTAACCACC
TGGCTGCGGTCATGTGCCGCCAGCTCAAGTTAACCACGGAGGCCCTGCAG
AGGCTTTCTGAACCCGGGGTAACCGAGATCATCCTCCCCGACTGCAGCCG
CATCGAGCCCGACCAAATGCGCGACTCCATCCTGCAGTGCCGACGCACCC
TCAGGGTCTTGAGGCTCGGCACATGCGGCCGGTGCATAGGAGACGCCACG
CTGGAGGCCCTTACGAAGGCCGGGGGAGTTCCAAGGTTGGAGATGGCGTC
CTTGGCGGGCACGTACCAGCTGACGGACACTGGTGTGCTGGAGCTGCTGC
GCTGCTGCCCGAGACTCACCGGGCTAGAGCTCTCCGCTAACTCGCGCATC
ACGCTCAAGGCCCTCGAGAAGATGGTCGACAAGGAACGGCCCATTGGGAT
GGCACTGACGACACTCTCGTTGACGGATTGCATCCAGCTCGGGCCAGACG
AGCTGGAGCCGTTGAAGGGAATGGCCTGCCTGGAGAGGCTTTCTCTCAGC
GGGTTAGCCAAGCTCACAGACGGAATCCTCCTGCAGATCTTGAAGGCGTG
CGGCGGACGGTTGCGCCACCTGGACATCTCGGACTGCACGGACCTTACCG
ACGCCACGCTCAAAGCCATAGGGGAGCGGTGCGGGGTCCTGGAGTCGCTC
AACCTTGGCCTGTGTCCCCTCCTCACGAGTGGTGCAATCCAAGAGATTTT
TCAGTACAGCGGGAGCTCTGCAGAGGCGTCGACGGGGCGCCTCGCGCAAA
ATCCAAGCGCTACAACCGCCCAAGACGATGGTGACATCAACCCCGCCAGC
AGTGGCGCCGGGGGCGCTTTGAAGGGGGAGGGGAAAGGTAAGGGGAAGGG
GAAGGGGAAGGGTAAAGGTGCGGCGGTAACCGCGTCTGTGGCTGCGGTAC
CGCGGTCAGCTTCCGCCGCAGACGGGGGCGATGGGGGTGGTGCACGGCTG
GGACACACCATGCTCAAGTCGAGGCTGACGAGCGTGTCTTTCCGAGGGCT
GGTGCAGGTGGACGACAAGGCAGTGGAGGCGATGGCGGCCGCGTGCTCTG
GCAGCCTTCGCTCTCTGGACCTGAAGGGACTGGCTCTCATCACGGACAGG
AGCCTGGTGGCGCTTGCGAGGTACTGCTCGTCATCGTTGGAATCGTTGGA
CCTGTCCTTCTGCAGGTCGGCCACCGACGACGGCTTGGGGCACCTGGTGG
ACGCTTGCGAGGACCTGAGGTCTCTCCGCCTGTGGGGGTGCATGCAAGTC
ACGGACCGCTTCCTGAGGGGGCACAGCAAGGAGGAGCTCGTCATCTCGCG
CTACTGA
back to top