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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LLF1 |
| ProteomeId | EsuBft414_8 |
| Protein domains | IPR027640 |
| Protein domains | IPR019821 |
| Protein domains | IPR001752 |
| Protein domains | IPR027417 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | kinesin-3 os:arabidopsis thaliana gn:atk3 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 2998 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.82e-52 |
| EggNOG OGs | COG5059@1|root,KOG0239@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG ko | ko:K10405 |
| Description | microtubule motor activity |
| COG category | Z |
| BRITE | ko00000,ko03036,ko04812 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016887 |
| GO | 0090307 |
| GO | 0010228 |
| GO | 0043085 |
| GO | 0010389 |
| GO | 0010103 |
| GO | 0000394 |
| GO | 0007019 |
| GO | 0005524 |
| GO | 0000235 |
| GO | 0003700 |
| GO | 0000911 |
| GO | 0007131 |
| GO | 0010583 |
| GO | 0006084 |
| GO | 0043247 |
| GO | 0046982 |
| GO | 0045132 |
| GO | 0045010 |
| GO | 0005872 |
| GO | 0000023 |
| GO | 0032504 |
| EC | 3.6.4.5 |
| GO | 0000742 |
| GO | 0009524 |
| GO | 0005515 |
| GO | 0009723 |
| EC | 3.6.4.4 |
| GO | 0000743 |
| GO | 0042023 |
| GO | 0016572 |
| GO | 0010075 |
| GO | 0007064 |
| GO | 0009086 |
| GO | 0031048 |
| GO | 0006306 |
| GO | 0008569 |
| GO | 0009736 |
| GO | 0006346 |
| GO | 0048439 |
| GO | 0009855 |
| GO | 0019252 |
| GO | 0009971 |
| GO | 0016021 |
| GO | 0042138 |
| GO | 0016117 |
| GO | 0032204 |
| GO | 0051567 |
| GO | 0010332 |
| GO | 0009909 |
| EC | 3.6.1.3 |
| GO | 0007129 |
| GO | 0008017 |
| GO | 0005816 |
| GO | 0008574 |
| GO | 0006275 |
| GO | 0010094 |
| GO | 0010051 |
| GO | 0009062 |
| GO | 0042127 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft414_8a-0001 ID=EsuBft414_8a-0001|Name=EsuBft414_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2998bp|location=Sequence derived from alignment at Scaffold_523:1503542..1507165- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCGACTGTTGTTGAAATGAAGCCCCGGATTTGTACGTGCAAACAGGG
GGTCCTCCACCTGGTCGACCTTGCCGGCAGCGAGAGGCTGGACAGGTCCG
GTGTCGGGAACGACGCGCAGCGGCTGCGGGAGACGCAGGCGATTAACAAG
TCCCTCAGCTGCCTGGCGGACGTGTTCTCCGCCCTCTCTGCCAAAGCGTC
GCACGTCCCCTTCAGGAACTCCAAGCTCACCTACCTCATGCAGGACTGCT
TGTCAGGAGACGGGAAGGCGCTCATGTTCGTCAACCTGTCGCCGACGGCA
GCGTCGGCGAACGAGAGCGTCTGCAGCCTCCGCTTTGCCAACCAGGTGAG
CCAGGTCCACCTGGGCAAGGCCAGCCGCCAGATGACCCTCAGCAAGCCGC
CGGGCTCCGGGCGCCTGAGCATCAACGGCGGTGGCGGCGGCGGACGCGGT
CCCAACAGCCCGACCCGCTCCCATGTCGGCCGAGTCGCCCGAGCCTCCGG
CAGTGCCGCCTCGACGGCGCCCCCTAGCCCCGGCAGCAGCCACGGCGGGA
GCTTCGGGTTCGGACGCTTGAGCACCGCCGGCGGCGGTGCCGCGGGCGGC
GGTGCCGCGGGCGGCGGCGGGAGGACGTCCACCACGGGCGGCGCAGCCGG
CGCAGCCGGCCGTCGATCCTCGAGACTGTCGACGTCGTCTTCTACGGCTA
ATAGCCCGCCGCCGGGGGCCAAGGCTCGGGCGGGCAGCCGCGGCGGCGCC
GGGGCGGTGGGGGTCCGTGGCAAGCCCTCGTTGGTCGGCGGTGCGAGGAT
GAGGGGAGGCGTCGGCGCCGGCGGCGGTGCCGGTTCGAGGACCAGCGTGG
GGAGGAAGACGAGCGGGAGCCGGCTGCCAACGCTGTCGTCGACGCGGTCG
ATGGGCTCCGGGGAGGGGATTCGCAGCGGGGGTGGGGGCGGGGAGACCGG
GAGGAGGACCAGCGGGAACACCAGGCCCTCCAGCGCGATCAGCAAGTCGC
TGCCGCCGTCGCCGAAGCCCTCGGCGGCAGACAAGCGGCTTCGGCTCAGC
TCGGACAGCGATGACAAGCGTCCGTGAAGTTGGAATGGCGCGAGCGTCTT
CTCTCCCAAAGCGAGCAGCTGTTCTTGTTCATCGCGAATAAATTGAACAG
CGAGTGCTGCTGCAAGTTGCTACTGCAAGTCTTGTGGGATTCTTACATGT
ATGCACGTCGAGCTTAGATACGCTGATGTGTGCTCGGTTTTCTAGAAAAT
TCGTCATTTCTTTGCGTGCGTTTCGTGCGATGTGTACATGTACGTGGTTG
TATTCACTGTTATGTGCGTTTTTCTGGAATACGGTATGTTTCTAGGGGCA
TAGCCATCATCACCCTGCTGGCGTTTCCTTATTCCGTAGGGATAGCGTGT
CGATTCTTTGCTTGGTGGGTGTAATAGTTGGAGACGGGTGGTTGAGCTCA
ATGCACCAACCAGGAGGTTGGTGCCCCGTGTACGTCTGGGTTGGGTGGGA
CGACGACGTAAATATGCGTTTTTTCTCGCTCCGCAACAGTGTTGAAGGTT
TTGACGTCATGTTTCTAGTTCTTTTCAGGTTTCTATGTAACGGTTCTCCA
GCATGTATCGTTATTTCTCATGACGTATGTATGTTGCTGTCCAGCATGGA
GCGCGATTTCTCATCACGTTGTTGCTGCTGAATCGTTCCCCTCTCACTCT
CGCTCAGCTGCCGACCGGACGAAACCCGGCAGATTGATAGTAAAGAGCGC
GTTTGACGCAGGGCATTCACATTGTACGGGTAGTTTTTTATGGGTGTTTT
TTCTCCGCGCCAGGCGACAAGTGCACTGCTGTCAAGGGGCGCGGTTATAC
GTGTAAGGAGGAGAGGAGAGTATATCGGAAGCTTATCGCATGTTCGTTGA
CTGTGTTGATTTGTTATTGCATGCCGGCCAGGGGTTATAAGAAGGAGAGG
GGAGTATGTCGTAAACTTTCGCATGTTCGTTGCTGCTGTGTTGATTTATA
TTGCATAATGGCCTCGCGTCGTATAAACTCCTTACCTTTTTCTGGCCTAA
AGGTCTTGCCGGAATCAGGCCGATGATTGGGATCGGGGGGGTGCGGAGAT
GGAAGGCAAGGGGCCGCGCTGTAGAATATTGCATGCACTCCCCCCCCTGC
GGCTTGTACATTTTGTGTTATGGAAGGCACCGGTATCCGTGCGCCTGTTG
AACATGTGCGTGTTGAGACTGCTACTACTACTGCCACCGTGCGCTAACGT
ATTCCTGCTGTTTTTCTTGGCATATTGTACCTGAGCTTACCCGCTTGTTT
TGCCTACCTTTATGGGTGGGTTGTGTTCTCCCTCAGTCGCCTGTAGTTAA
GAAATATGTGTACAAACGACGGTACCAGCCGCGGTTGTTGGGCGTCCCGG
CTTGCGGGCGTAAGGAGCTGTTTTACACTCGAGCATTTGCTGTTGTAGAA
CATAGGGGGGGTGTCTGTTTTTGTTGTAGGGGACGAAAAAACATGGATCG
ACAGAGAGGACGGACAAGCCGCACTATTTTACGAGAACAGGGGCCAGAGG
AAGAGGTTGGCCTCGACCTTGCCGAAATTGTTGGCTAATTTTTAAAGTCA
ATAATCTACTGCTTCAAGGGGGGGTTGGGGGTTGCTATGTTTGCTCGCTG
TCGAAATCATACTTGACGATTTCAGGCCGAACCTGGTCGCGTTCCCATCC
ACCGCGCCCACAGGAAGCCGGCAACTGGTGGCTTTGGAGGAGTAAGGAGG
CAACATGCAGGGGGGCACTCGGAGAATGGTCTTGCTGTTCTTTTTGTGCG
TGATGATGAAGGCATGTCTTGTGGTGGGGCGTAGAGAGTAGAAGTCTGAC
ATCTTGCTATAAAGGGTGAGCCGGCGCAGACGTTCTGTGCGACGACGGCA
TGTATTGGACTTCGGAGTTTAGTTTTGCACACAATAACAAGCGCGTGAAT
TCTCTTCTACCTCCTGTGTACTGCCGTAGCGCGCTCTAAGTCAGCTAA back to topprotein sequence of EsuBft414_8a-0001 >EsuBft414_8 ID=EsuBft414_8|Name=EsuBft414_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=358bp
MSTVVEMKPRICTCKQGVLHLVDLAGSERLDRSGVGNDAQRLRETQAINK
SLSCLADVFSALSAKASHVPFRNSKLTYLMQDCLSGDGKALMFVNLSPTA
ASANESVCSLRFANQVSQVHLGKASRQMTLSKPPGSGRLSINGGGGGGRG
PNSPTRSHVGRVARASGSAASTAPPSPGSSHGGSFGFGRLSTAGGGAAGG
GAAGGGGRTSTTGGAAGAAGRRSSRLSTSSSTANSPPPGAKARAGSRGGA
GAVGVRGKPSLVGGARMRGGVGAGGGAGSRTSVGRKTSGSRLPTLSSTRS
MGSGEGIRSGGGGGETGRRTSGNTRPSSAISKSLPPSPKPSAADKRLRLS
SDSDDKRP back to topmRNA from alignment at Scaffold_523:1503542..1507165- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft414_8a-0001 ID=EsuBft414_8a-0001|Name=EsuBft414_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3624bp|location=Sequence derived from alignment at Scaffold_523:1503542..1507165- (Ectocarpus subulatus male Bft15b)
ATGTCGACTGTTGTTGAAATGAAGCCCCGGATTTGTACGTGCAAACAGGT
ATCACTGCAAAATGTTTCCTTCGCATAGACATGCTGAAATCCCTCTACCT
GCGTATGACCCCTGCCCCCCCCCTTCACCTCACCTGTCTATCGAAACGCC
TCGCCGGACAATTACGTGGCGCAACAGGGGGTCCTCCACCTGGTCGACCT
TGCCGGCAGCGAGAGGCTGGACAGGTCCGGTGTCGGGAACGACGCGCAGC
GGCTGCGGGAGACGCAGGCGATTAACAAGTCCCTCAGCTGCCTGGCGGAC
GTGTTCTCCGCCCTCTCTGCCAAAGCGTCGCACGTCCCCTTCAGGAACTC
CAAGCTCACCTACCTCATGCAGGTGTGTGTGTGTGTGCGTGCGCGCGCGT
TATGCTTGTCTTCGAGAAAGCGCCGACGTCGGTACTACAACCGGCTGACC
AATGACAAGACAGCAGTGTTTTTTTTGCCTACCCCGTGGCGGTGTTGTTC
CCGCGCCGGCGGCAGGGCGTGCGCTTGTGTCTCTTTTGTTTCATATTGAA
AATTTGACGTATGATTACGTTCTTGCTCGCCTTCACGAACTGCACACAGC
TTGTATCCGTGTCTGATTTTCACCTCTCACATTGGCCGGCGGCACTCATT
TCGCTAAAGTTGGTCTCCCTTCGCATTGAAACATTGTGAGCGTGAATGCA
TGTACATAAAAAAGGCGCGTTTCCCTGTCGCACGCGCGTGTACGCTATGG
TACGGCAGGACTGCTTGTCAGGAGACGGGAAGGCGCTCATGTTCGTCAAC
CTGTCGCCGACGGCAGCGTCGGCGAACGAGAGCGTCTGCAGCCTCCGCTT
TGCCAACCAGGTGAGCCAGGTCCACCTGGGCAAGGCCAGCCGCCAGATGA
CCCTCAGCAAGCCGCCGGGCTCCGGGCGCCTGAGCATCAACGGCGGTGGC
GGCGGCGGACGCGGTCCCAACAGCCCGACCCGCTCCCATGTCGGCCGAGT
CGCCCGAGCCTCCGGCAGTGCCGCCTCGACGGCGCCCCCTAGCCCCGGCA
GCAGCCACGGCGGGAGCTTCGGGTTCGGACGCTTGAGCACCGCCGGCGGC
GGTGCCGCGGGCGGCGGTGCCGCGGGCGGCGGCGGGAGGACGTCCACCAC
GGGCGGCGCAGCCGGCGCAGCCGGCCGTCGATCCTCGAGACTGTCGACGT
CGTCTTCTACGGCTAATAGCCCGCCGCCGGGGGCCAAGGCTCGGGCGGGC
AGCCGCGGCGGCGCCGGGGCGGTGGGGGTCCGTGGCAAGCCCTCGTTGGT
CGGCGGTGCGAGGATGAGGGGAGGCGTCGGCGCCGGCGGCGGTGCCGGTT
CGAGGACCAGCGTGGGGAGGAAGACGAGCGGGAGCCGGCTGCCAACGCTG
TCGTCGACGCGGTCGATGGGCTCCGGGGAGGGGATTCGCAGCGGGGGTGG
GGGCGGGGAGACCGGGAGGAGGACCAGCGGGAACACCAGGCCCTCCAGCG
CGATCAGCAAGTCGCTGCCGCCGTCGCCGAAGCCCTCGGCGGCAGACAAG
CGGCTTCGGCTCAGCTCGGACAGCGATGACAAGCGTCCGTGAAGTTGGAA
TGGCGCGAGCGTCTTCTCTCCCAAAGCGAGCAGCTGTTCTTGTTCATCGC
GAATAAATTGAACAGCGAGTGCTGCTGCAAGTTGCTACTGCAAGTCTTGT
GGGATTCTTACATGTATGCACGTCGAGCTTAGATACGCTGATGTGTGCTC
GGTTTTCTAGAAAATTCGTCATTTCTTTGCGTGCGTTTCGTGCGATGTGT
ACATGTACGTGGTTGTATTCACTGTTATGTGCGTTTTTCTGGAATACGGT
ATGTTTCTAGGGGCATAGCCATCATCACCCTGCTGGCGTTTCCTTATTCC
GTAGGGATAGCGTGTCGATTCTTTGCTTGGTGGGTGTAATAGTTGGAGAC
GGGTGGTTGAGCTCAATGCACCAACCAGGAGGTTGGTGCCCCGTGTACGT
CTGGGTTGGGTGGGACGACGACGTAAATATGCGTTTTTTCTCGCTCCGCA
ACAGTGTTGAAGGTTTTGACGTCATGTTTCTAGTTCTTTTCAGGTTTCTA
TGTAACGGTTCTCCAGCATGTATCGTTATTTCTCATGACGTATGTATGTT
GCTGTCCAGCATGGAGCGCGATTTCTCATCACGTTGTTGCTGCTGAATCG
TTCCCCTCTCACTCTCGCTCAGCTGCCGACCGGACGAAACCCGGCAGATT
GATAGTAAAGAGCGCGTTTGACGCAGGGCATTCACATTGTACGGGTAGTT
TTTTATGGGTGTTTTTTCTCCGCGCCAGGCGACAAGTGCACTGCTGTCAA
GGGGCGCGGTTATACGTGTAAGGAGGAGAGGAGAGTATATCGGAAGCTTA
TCGCATGTTCGTTGACTGTGTTGATTTGTTATTGCATGCCGGCCAGGGGT
TATAAGAAGGAGAGGGGAGTATGTCGTAAACTTTCGCATGTTCGTTGCTG
CTGTGTTGATTTATATTGCATAATGGCCTCGCGTCGTATAAACTCCTTAC
CTTTTTCTGGCCTAAAGGTCTTGCCGGAATCAGGCCGATGATTGGGATCG
GGGGGGTGCGGAGATGGAAGGCAAGGGGCCGCGCTGTAGAATATTGCATG
CACTCCCCCCCCTGCGGCTTGTACATTTTGTGTTATGGAAGGCACCGGTA
TCCGTGCGCCTGTTGAACATGTGCGTGTTGAGACTGCTACTACTACTGCC
ACCGTGCGCTAACGTATTCCTGCTGTTTTTCTTGGCATATTGTACCTGAG
CTTACCCGCTTGTTTTGCCTACCTTTATGGGTGGGTTGTGTTCTCCCTCA
GTCGCCTGTAGTTAAGAAATATGTGTACAAACGACGGTACCAGCCGCGGT
TGTTGGGCGTCCCGGCTTGCGGGCGTAAGGAGCTGTTTTACACTCGAGCA
TTTGCTGTTGTAGAACATAGGGGGGGTGTCTGTTTTTGTTGTAGGGGACG
AAAAAACATGGATCGACAGAGAGGACGGACAAGCCGCACTATTTTACGAG
AACAGGGGCCAGAGGAAGAGGTTGGCCTCGACCTTGCCGAAATTGTTGGC
TAATTTTTAAAGGTATAGTCTAGATTACCCCTGTTCAAGAGCTACTTTCA
ATGGTGACATTCCGTGCTGCAAGGTTGTCTGGAAGCTTTCGACGTGGTGG
GTGGGTGTGGGGGTCATCATTAGTCAATAATCTACTGCTTCAAGGGGGGG
TTGGGGGTTGCTATGTTTGCTCGCTGTCGAAATCATACTTGACGATTTCA
GGCCGAACCTGGTCGCGTTCCCATCCACCGCGCCCACAGGAAGCCGGCAA
CTGGTGGCTTTGGAGGAGTAAGGAGGCAACATGCAGGGGGGCACTCGGAG
AATGGTCTTGCTGTTCTTTTTGTGCGTGATGATGAAGGCATGTCTTGTGG
TGGGGCGTAGAGAGTAGAAGTCTGACATCTTGCTATAAAGGGTGAGCCGG
CGCAGACGTTCTGTGCGACGACGGCATGTATTGGACTTCGGAGTTTAGTT
TTGCACACAATAACAAGCGCGTGAATTCTCTTCTACCTCCTGTGTACTGC
CGTAGCGCGCTCTAAGTCAGCTAA back to topCoding sequence (CDS) from alignment at Scaffold_523:1503542..1507165- >EsuBft414_8a-0001 ID=EsuBft414_8a-0001|Name=EsuBft414_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1077bp|location=Sequence derived from alignment at Scaffold_523:1503542..1507165- (Ectocarpus subulatus male Bft15b)
ATGTCGACTGTTGTTGAAATGAAGCCCCGGATTTGTACGTGCAAACAGGG
GGTCCTCCACCTGGTCGACCTTGCCGGCAGCGAGAGGCTGGACAGGTCCG
GTGTCGGGAACGACGCGCAGCGGCTGCGGGAGACGCAGGCGATTAACAAG
TCCCTCAGCTGCCTGGCGGACGTGTTCTCCGCCCTCTCTGCCAAAGCGTC
GCACGTCCCCTTCAGGAACTCCAAGCTCACCTACCTCATGCAGGACTGCT
TGTCAGGAGACGGGAAGGCGCTCATGTTCGTCAACCTGTCGCCGACGGCA
GCGTCGGCGAACGAGAGCGTCTGCAGCCTCCGCTTTGCCAACCAGGTGAG
CCAGGTCCACCTGGGCAAGGCCAGCCGCCAGATGACCCTCAGCAAGCCGC
CGGGCTCCGGGCGCCTGAGCATCAACGGCGGTGGCGGCGGCGGACGCGGT
CCCAACAGCCCGACCCGCTCCCATGTCGGCCGAGTCGCCCGAGCCTCCGG
CAGTGCCGCCTCGACGGCGCCCCCTAGCCCCGGCAGCAGCCACGGCGGGA
GCTTCGGGTTCGGACGCTTGAGCACCGCCGGCGGCGGTGCCGCGGGCGGC
GGTGCCGCGGGCGGCGGCGGGAGGACGTCCACCACGGGCGGCGCAGCCGG
CGCAGCCGGCCGTCGATCCTCGAGACTGTCGACGTCGTCTTCTACGGCTA
ATAGCCCGCCGCCGGGGGCCAAGGCTCGGGCGGGCAGCCGCGGCGGCGCC
GGGGCGGTGGGGGTCCGTGGCAAGCCCTCGTTGGTCGGCGGTGCGAGGAT
GAGGGGAGGCGTCGGCGCCGGCGGCGGTGCCGGTTCGAGGACCAGCGTGG
GGAGGAAGACGAGCGGGAGCCGGCTGCCAACGCTGTCGTCGACGCGGTCG
ATGGGCTCCGGGGAGGGGATTCGCAGCGGGGGTGGGGGCGGGGAGACCGG
GAGGAGGACCAGCGGGAACACCAGGCCCTCCAGCGCGATCAGCAAGTCGC
TGCCGCCGTCGCCGAAGCCCTCGGCGGCAGACAAGCGGCTTCGGCTCAGC
TCGGACAGCGATGACAAGCGTCCGTGA back to top
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