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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft414_13 |
| Protein domains | IPR001202 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 257 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-27_002440.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft414_13a-0001 ID=EsuBft414_13a-0001|Name=EsuBft414_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2570bp|location=Sequence derived from alignment at Scaffold_523:1536942..1542671+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGCCCACACCTTCACACAACTCACATCGGCAAGACGCAACGCCACCATCC GCAGCAGAGCAAAGCCTCGCAAAACTCCGCAAGCAGTGCACGTCGCACGT ACTCAGTACACTTCACCACCCCAGCCTTCGCAGCGCATCAGCAGCAGCAC TCATTAACGGGTGACACAGCATGTCGTTCTTCACGAAAGGACTCGCGGGC ATCTTCAACAACGGAAAGGCTCGCAAGAAAGACGAAGGAAAGGGCTGTGA CAAGAAGAAGGACAAGAAGGACGAAGGGAGCTGGGAGGAGCTCACGGACG CCTACGGCCGCACGTACTGGCAGCACAGCAAGACAGGCGAGTGGCACTTC GGCTACGGTGGCGGCTTTGTCCCTCCCGTTGGGACGGTCAACCCGTCCCC CATGGGCTACCCCGGCGGCCCGGTCTTCACGCCGTCGCCAGTGCACGGCG GCACACTCTTCCCTGTCGCTGTCGCCCCCGCTAAGAAGAAGGAGAAGAAG GAGAAGGGCAAGGGGTGGTGGGAGACGATGTACGACGAAGACGGAGACAA GTACTGGGAGCACACGGTGACAAAGAAGACCACCTACAAGGACCCTTACT ACTGAACACGAAGAGCACGAGCAGAAAAGAACGAACAAGAGGTTTGGTTG TATATAAGCGTGCAGGCTGTCCATGGCGGAGTGGAATGGATGGCGTGTTC GGGTAATGAGTAAGTGTAGAGTTTCTTCCCGAGGGTGCCCTGGATAAATC CCGAAAGCTCCAGACTATGGCAGGATGGTTCGGGATAACTAAAAATATGT CGTCTTGGGGAAATATATGTTGCAGAGGCCCACTTGATGGTAGCAAAGGC AGAGCTACTGCTGCAGCTCCTTGTAATCTACGCCCCTTTGCGACCACTCG GCGCCATTCTTTCACGCAAGTCCCCTTGCGTGTGGCATATGTATGTATGT TGCGTGTCTTTTGTTTTTTTCGTGTATACTGTGACGAAAACATGGGGAAT GAGTTCTACGATGGGTTGCGACGACAGCAGTGCATTTTCACGCGGCGGGT AACGAGTGGGGGGGTTGAGTTGGTGTGGGGGTTGCGAGTGGCTGGTTGAG TTAGAGTTTGTGCTTTGTTCGGATCGTCCTTGTTCTTTGTTTTCGACTAA GATTCCAGTTGTAGTTGTGTCTTTGTTTTATTATTCATGAACCAGAAGAG GATGAGCCTGGCTGTCGACTCCACGACAAAATTAAACATTCGTTGGTCTG CGAGAAAGTCAGGTTTATGCAACACTTCGTATGTCTTTTCATGGTTTTGG CTAGTCAGACTACACGAGTACTTCGGTGGGGTATTGGTACGGTGATGATT ACGTAGGGTAAAATGTAACACAACACAAAGAAGCATTTTAGGATGCATGC ACCCATTTTGTGTCGGCAAGTGCTACAGGTACAGGGAGGGCTCATGTTCC GAGTGGGGTTGGCGTGAGGGTCTGAGGTGCTGAACAGGAACCACGTGTGA AGGGTGCACGCCGATTGCGTATGAGTTGGGATTGGCGGAAGGGTTGGGAC GAACGTCGGAAATGGGGGCGCCGTGAGGCTGCACTCAATTCGTGAGGAAA ACTGGCGCATATTTTACGATCCTTGGCAAAGGGGGAAGCAGAAGGTTGTA CTCGTTTCGGGAATACACTGATTTTGGTTGGGGAGGAGGACTGGGCGTAC GCTTGTGGACTCTTTGTAAATACATGCGATGTGCAGGTGGAAGTGCTTTG AAGCAGGAGATAAAAAATAACACATTTGTACATAAAACAACGAGCTTACT TGTATGTATGGAGCTTTTTCTCCCCTGTTTTTGAGAGCATTAAAACGGAG GGGGCATCCTTGCTTAGGCGACGGCATGCCTTGAATTGCCGAAGGCCAAA CAAAGTGGCGTAGTGCCGTGTTCTGGGGAAAACGCTGCCGCTACACCGTC GTCGTCGCCAAGCGCGCCATGTAACTTTCCTGTGGCTACCTTCGCCTCGT GGGTGTGCAGGCGTGCGACGCATCTCTCTCACCCTCATCACCAGAGAGAG CGATCGATGCCTGCCGTCATCAGAAAATGTCAAGCCTCTGTGTGGCCGTC GCGCCATGTTTCGCAGGCGAGGCGGCTCTGAGACGCGGAATCTTCGCGAC GACCCAACCGCGTTCCACCATCTATGCAGCTCGTTTCTTCTTATTTTTGG TGCACAGCCAAGGGTCGCAACAACAGCCGGGGCTACCAGTAACAGCGCAC AAAACACGGTGAAGAGCTTGAAGGGCCCGAGCCAACGGCTGCATTTTGAG GGTTTAGTCGTCAGACACTTCTACCCGGAATCAATGGGAACTACTTTAAT TTAGCTGACCTTGCACACGTGGTACCAACGGACATACGCCGTCTAGTGTG TGAGCCTGTCTGCCTGTTTTCTAGACACCCTCTCGTCCAAGAGAGGTAGG GCGTGTGTTGTCATAGTCTTACCAGTTTTTTCCTGGTGTCACGAATACTG GCGTGTGCTGTGACTTGTCAACTGCTTTCGACGGCAGCGACTACTCTGCG ACTGAGCGTCTTACCTGGGC back to topprotein sequence of EsuBft414_13a-0001 >EsuBft414_13 ID=EsuBft414_13|Name=EsuBft414_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=144bp
MSFFTKGLAGIFNNGKARKKDEGKGCDKKKDKKDEGSWEELTDAYGRTYW QHSKTGEWHFGYGGGFVPPVGTVNPSPMGYPGGPVFTPSPVHGGTLFPVA VAPAKKKEKKEKGKGWWETMYDEDGDKYWEHTVTKKTTYKDPYY back to topmRNA from alignment at Scaffold_523:1536942..1542671+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft414_13a-0001 ID=EsuBft414_13a-0001|Name=EsuBft414_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5730bp|location=Sequence derived from alignment at Scaffold_523:1536942..1542671+ (Ectocarpus subulatus male Bft15b) CGCCCACACCTTCACACAACTCACATCGGCAAGACGCAACGCCACCATCC
GCAGCAGAGCAAAGCCTCGCAAAACTCCGCAAGCAGTGCACGTCGCACGT
ACTCAGTACACTTCACCACCCCAGCCTTCGCAGCGCATCAGCAGCAGCAC
TCATTAACGGGTGACACAGCATGTCGTTCTTCACGAAAGGACTCGCGGGC
ATCTTCAACAACGGAAAGGCTCGCAAGAAAGGTGACTTTGAAGTGCGTCG
ACGATTGCTGTGCATATCTCTGGCGTTGCTGCTGCCTCTCACTGCTGCTG
CTTCAGGTTCATTCGCGAGGTTGAAGCCTCTTGCTGCTGATGGTTGGCTG
CATGTATACTACAGCTGTAGTTCGTTGCAGCTCCACACGGCCGTTTCCTC
AAAATTCCAAACTTCGTTGACCCGCGTTGTGGCCGCTCCTGACTCCGTCC
TCCGTCGCTCTCCCTCCACCCCCTGCGCGTTCTCACACACAGACGAAGGA
AAGGGCTGTGACAAGAAGAAGGACAAGAAGGACGAAGGGAGCTGGGAGGA
GCTCACGGACGCCTACGGCCGCACGTACTGGTGAGAGACCCGACGAGACA
CAGCAGCGATGCGAAAGTGGCGGTTTGCCTTTGGTCTCCTCACTTGGCAG
AAGCATTTCTAGCCTCGGAATTCCGAGCCTTGTTCGACCACTGCATGCTG
CTGCTGTGCTAGACTAGAGCAGTACTGCTACTGCTGTATATAGAGCTGCC
TCAACGGGATGACGAGTACTTCGAAGTACACGTAGATATTCTTGCTGGCC
TTAACAACATATTCGCCTGATTGAGAGCGTAGCATCTGATTGAGAGCGAG
ATTGCGCGATACGCTGTAGCCGGACTACCACTGAGAGGTGGAGCTTGCTG
TGTAGCTTGAATTGAAGGGCTAGCCCGTAGCTTCAAGCCGCTACCCTGGT
CATCCTGTGGGAGTCTCTCGTTGTGGAGCTACAGCGGGGAGCAGAAGCTA
CAGCAGAGCCCACCGCCCGACGCGATACCGCCCTGAAACAGTTTGAGCAG
AAATAGCCAATCTGGGCAAATCTAGCAACTTGTCTAGCTCCTCGCTGCAG
CATCCGATGACGATGACACGCATATGCTCGCGAAGCTGCTGATGAGACCT
TCAATTTGCACCGCTTCTTGGAATAGCCCGTCCCCTACTTGCCAAGAAAT
GGCAAGAGGCGTCTGGACCCGAAATTTCAATTTTTTTGGCTCTCGCTCTC
AATCAGATACTTCGCTCTCAATCAGGCGAATATGTTGTTCCTTCCGTTCC
AACAAAAGGCCACCAGTTGGAAGGTTGCAAGTACTCTACTTCCACAGAAT
CTGCCCGCGACTTTGCCAGTTCAACAACGACAAGGTTCGCGGGAGAATCC
CGCGTTCAATATACTTGCGTTTTCTGCGCCGGAGCACGGCCCAACGTCCA
ACTCTATTCGTACCGGTTCAATGCGGGCACGTCAACAACATATGCTAACG
ATTCACGTGCGTTTATCCCTGGATAACGACCGAGGTTAGACAAATGATCT
ACAGGTCTGGAACAACAAGTTCGTTGGGCGTTTCGCCTTTGGCTTGCCCC
ACACAACGATGCGATAGGCCTTCCTGCCCAATCCGACACACTGATTTTGA
TTGTTTTTCAGTCTTCAACCAGTTTTTTGCCATGCTGCTCGCGAAGTTCA
GCTTGTAGGGCATGTGCAAGCTGAAGCCGGCTACTCGATGTGGAGTATTT
GACCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCTAGATCATGTTGTGCGGGGTGGAGAACTCTCGCTC
CGCGCAAGGGGGATGATGGAACCACGTTGTGTTAAAATGGTCAAGCACCC
TCGAGGCAGTTACACAGAGCTTANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNCCCCCGCCTTGTCCTCCCGTTTGTCCTCCACCC
TGTTTCCGTCACATTCCTTAAACCAACAGGCAGCACAGCAAGACAGGCGA
GTGGCACTTCGGCTACGGTGGCGGCTTTGTCCCTCCCGTTGGGACGGTCA
ACCCGTCCCCCATGGGCTACCCCGGCGGCCCGGTCTTCACGCCGTCGCCA
GTGCACGGCGGCACACTCTTCCCTGTCGCTGTCGCCCCCGCTAAGAAGAA
GGAGAAGAAGGAGAAGGGCAAGGGGTGGTGGGAGACGATGTACGACGAAG
ACGGAGACAAGTACTGGGAGCACACGGTGACAAAGAAGACCACCTACAAG
GACCCTTACTACTGAACACGAAGAGCACGAGCAGAAAAGAACGAACAAGA
GGTTTGGTTGTATATAAGCGTGCAGGCTGTCCATGGCGGAGTGGAATGGA
TGGCGTGTTCGGGTAATGAGTAAGTGTAGAGTTTCTTCCCGAGGGTGCCC
TGGATAAATCCCGAAAGCTCCAGACTATGGCAGGATGGTTCGGGATAACT
AAAAATATGTCGTCTTGGGGAAATATATGTTGCAGAGGCCCACTTGATGG
TAGCAAAGGCAGAGCTACTGCTGCAGCTCCTTGTAATCTACGCCCCTTTG
CGACCACTCGGCGCCATTCTTTCACGCAAGTCCCCTTGCGTGTGGCATAT
GTATGTATGTTGCGTGTCTTTTGTTTTTTTCGTGTATACTGTGACGAAAA
CATGGGGAATGAGTTCTACGATGGGTTGCGACGACAGCAGTGCATTTTCA
CGCGGCGGGTAACGAGTGGGGGGGTTGAGTTGGTGTGGGGGTTGCGAGTG
GCTGGTTGAGTTAGAGTTTGTGCTTTGTTCGGATCGTCCTTGTTCTTTGT
TTTCGACTAAGATTCCAGTTGTAGTTGTGTCTTTGTTTTATTATTCATGA
ACCAGAAGAGGATGAGCCTGGCTGTCGACTCCACGACAAAATTAAACATT
CGTTGGTCTGCGAGAAAGTCAGGTTTATGCAACACTTCGTATGTCTTTTC
ATGGTTTTGGCTAGTCAGACTACACGAGTACTTCGGTGGGGTATTGGTAC
GGTGATGATTACGTAGGGTAAAATGTAACACAACACAAAGAAGCATTTTA
GGATGCATGCACCCATTTTGTGTCGGCAAGTGCTACAGGTACAGGGAGGG
CTCATGTTCCGAGTGGGGTTGGCGTGAGGGTCTGAGGTGCTGAACAGGAA
CCACGTGTGAAGGGTGCACGCCGATTGCGTATGAGTTGGGATTGGCGGAA
GGGTTGGGACGAACGTCGGAAATGGGGGCGCCGTGAGGCTGCACTCAATT
CGTGAGGAAAACTGGCGCATATTTTACGATCCTTGGCAAAGGGGGAAGCA
GAAGGTTGTACTCGTTTCGGGAATACACTGATTTTGGTTGGGGAGGAGGA
CTGGGCGTACGCTTGTGGACTCTTTGTAAATACATGCGATGTGCAGGTGG
AAGTGCTTTGAAGCAGGAGATAAAAAATAACACATTTGTACATAAAACAA
CGAGCTTACTTGTATGTATGGAGCTTTTTCTCCCCTGTTTTTGAGAGCAT
TAAAACGGAGGGGGCATCCTTGCTTAGGCGACGGCATGCCTTGAATTGCC
GAAGGCCAAACAAAGTGGCGTAGTGCCGTGTTCTGGGGAAAACGCTGCCG
CTACACCGTCGTCGTCGCCAAGCGCGCCATGTAACTTTCCTGTGGCTACC
TTCGCCTCGTGGGTGTGCAGGCGTGCGACGCATCTCTCTCACCCTCATCA
CCAGAGAGAGCGATCGATGCCTGCCGTCATCAGAAAATGTCAAGCCTCTG
TGTGGCCGTCGCGCCATGTTTCGCAGGCGAGGCGGCTCTGAGACGCGGAA
TCTTCGCGACGACCCAACCGCGTTCCACCATCTATGCAGCTCGTTTCTTC
TTATTTTTGGTGCACAGCCAAGGGTCGCAACAACAGCCGGGGCTACCAGT
AACAGCGCACAAAACACGGTGAAGAGCTTGAAGGGCCCGAGCCAACGGCT
GCATTTTGAGGGTTTAGTCGTCAGACACTTCTACCCGGAATCAATGGGAA
CTACTTTAATTTAGCTGACCTTGCACACGTGGTACCAACGGACATACGCC
GTCTAGTGTGTGAGCCTGTCTGCCTGTTTTCTAGACACCCTCTCGTCCAA
GAGAGGTAGGGCGTGTGTTGTCATAGTCTTACCAGTTTTTTCCTGGTGTC
ACGAATACTGGCGTGTGCTGTGACTTGTCAACTGCTTTCGACGGCAGCGA
CTACTCTGCGACTGAGCGTCTTACCTGGGC back to topCoding sequence (CDS) from alignment at Scaffold_523:1536942..1542671+ >EsuBft414_13a-0001 ID=EsuBft414_13a-0001|Name=EsuBft414_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=435bp|location=Sequence derived from alignment at Scaffold_523:1536942..1542671+ (Ectocarpus subulatus male Bft15b) ATGTCGTTCTTCACGAAAGGACTCGCGGGCATCTTCAACAACGGAAAGGC TCGCAAGAAAGACGAAGGAAAGGGCTGTGACAAGAAGAAGGACAAGAAGG ACGAAGGGAGCTGGGAGGAGCTCACGGACGCCTACGGCCGCACGTACTGG CAGCACAGCAAGACAGGCGAGTGGCACTTCGGCTACGGTGGCGGCTTTGT CCCTCCCGTTGGGACGGTCAACCCGTCCCCCATGGGCTACCCCGGCGGCC CGGTCTTCACGCCGTCGCCAGTGCACGGCGGCACACTCTTCCCTGTCGCT GTCGCCCCCGCTAAGAAGAAGGAGAAGAAGGAGAAGGGCAAGGGGTGGTG GGAGACGATGTACGACGAAGACGGAGACAAGTACTGGGAGCACACGGTGA CAAAGAAGACCACCTACAAGGACCCTTACTACTGA back to top
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