EsuBft409_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft409_9a-0001
Unique NameEsuBft409_9a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_242contigScaffold_242:694559..698477 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G921
ProteomeIdEsuBft409_9
Protein domainsIPR008271
Protein domainsIPR000719
Protein domainsIPR011009
Protein domainsG3DSA
Protein domainsIPR002290
Protein domainsPTHR23257
Ownerapollo_admin@sb-roscoff.fr
Noteprobable serine threonine-protein kinase ddb [Automatic annotation]
Nb exon7
Max annot lvl2759|Eukaryota
Length1291
Hectar predicted targeting categoryother localisation
Evalue3e-273
EggNOG OGsKOG0198@1|root,KOG0198@2759|Eukaryota
Date last modified2016-06-13
Date creation2016-06-13
KEGG koko:K05391
KEGG TC1.A.1.5
KEGG Pathwayko04626,map04626
DescriptionMAP kinase kinase kinase activity
COG categoryS
BRITEko00000,ko00001,ko04040
Cross References
External references for this mRNA
DatabaseAccession
GO0030447
GO0005524
EC2.7.11
GO0043408
GO0004702
GO0032147
GO0044424
GO0071470
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft409_9aEsuBft409_9aEctocarpus subulatus male Bft15bgeneScaffold_242 694559..698477 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft409_9a-0001EsuBft409_9Ectocarpus subulatus male Bft15bpolypeptideScaffold_242 694559..698449 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft409_9a-0001-exonagat-exon-93956Ectocarpus subulatus male Bft15bexonScaffold_242 694559..694672 -
EsuBft409_9a-0001-exonEsuBft409_9a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_242 695059..695214 -
EsuBft409_9a-0001-exonagat-exon-93958Ectocarpus subulatus male Bft15bexonScaffold_242 695517..695678 -
EsuBft409_9a-0001-exonagat-exon-93955Ectocarpus subulatus male Bft15bexonScaffold_242 696042..696119 -
EsuBft409_9a-0001-exonagat-exon-93959Ectocarpus subulatus male Bft15bexonScaffold_242 696458..696568 -
EsuBft409_9a-0001-exonagat-exon-93960Ectocarpus subulatus male Bft15bexonScaffold_242 697238..697455 -
EsuBft409_9a-0001-exonagat-exon-93957Ectocarpus subulatus male Bft15bexonScaffold_242 698026..698477 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft409_9a-0001-cdsEsuBft409_9a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_242 694559..694672 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft409_9a-0001-exonagat-five_prime_utr-9659Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_242 698450..698477 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft409_9a-0001 ID=EsuBft409_9a-0001|Name=EsuBft409_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1291bp|location=Sequence derived from alignment at Scaffold_242:694559..698477- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTCCCGCTCGCCGCGTCACAGGGTGAGCATGACTCTCGGCCCGACTGGGG
GCTTGCATTTGGCCCGAAAGCCTGAACACAACAGGTTCAGCAGCGGGGGA
ACAAGCATGGGGGCTGACCGAAACATAGGGCTGTCTGAGAACCCGAGCAT
TGCAAGCACGGCGGAGGAGGGCGTGAATGTGACAGAGGGGGAAGACGACG
GTCCGGTTGAGAGAGGGGATGAGGATGAGGAGGACAAGGCCGTCGGACCG
TTCACAGAGACCTCCTTGGAGATGGCGCGGTTACGCCTGCCGCACATGGA
GCTGGGGTTTGAAGAAGACGGCTTCTTCGGGATTGACGTGCGATCCCTGA
TTATCGGGAGGGAAATCGCACGAGGAGCTTATGGCGTGGTTCACGAAGGA
AAGCTATATCCGTCGCCGAGGGATGCAAGTGTTGAGGATGGAGAACAAGC
AGCGGCTGCACCCAGGGAAGCAGAAGGTGGCGCGGCTGCCAACATAAAGG
GAGAGGTGGAGAGGGTTACACTTGTAACGGAGGCGACGGAGGAGGACATT
TTCCATGACGCTGCTCAAGAGAGCGTGGAACACGCCAAAGGAGGAGGGGA
TGCTGCACAGGAAGAGGAGGAGGAGGCGAGGAGCGTGGCAGTAAAGATTC
AACAAGTACCCGAGGACGAGGAAGAGCAAGCCAACCTGCTGGGGGAGCTT
GCGATGCTAAGAAATCACAAGCACTCGCACCTCGTTGAGTTCATCGGAAC
GGCTATGGCCGTGGAGAGAGGCTCTGACACGGTGATGGTGGTGATGGAAT
TGTGCACCAACGGGGCGTTGCGAGAGGCGTTGAAACTTAACATCGACTGG
CCACTCAAGGTACGAATCGCGTCAGACATGACGGATGGGCTGCAATACCT
GCACCAACACGGTATCATCCACCGAGATATCAAAACCCCCAACGTTTTGA
TCGACGGCTGCTGGAGAGCGAAGCTGTGCGACTACAACTTCGCCATCGAC
GAGAACAGCTCCATCAAGCAGGACTTTTGCGCGGGAACGGCGGAGTTCAT
GTCTCCCGAGGTGTTGCTCTCGGAGGAGTACGGGCTACCGAGTGACGTCT
TCAGCCTGGGCATGATATTTGTAGAGATGCTTACGGGTCAGGAACCAAGT
CCTTCCTTCCCGGAGAGGCCGCCACAGACGTTTTTCGTCGTGAGCGAGGA
GGAGATAGAGGGGCAGCTGCTGCCAGGGTATCCTTCGTCGTTCTCGCTTT
TGCAGTCGCAATGCCTCTTCGCCGAACCAGCCGAGAGGTGA
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protein sequence of EsuBft409_9a-0001

>EsuBft409_9 ID=EsuBft409_9|Name=EsuBft409_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=420bp
MTLGPTGGLHLARKPEHNRFSSGGTSMGADRNIGLSENPSIASTAEEGVN
VTEGEDDGPVERGDEDEEDKAVGPFTETSLEMARLRLPHMELGFEEDGFF
GIDVRSLIIGREIARGAYGVVHEGKLYPSPRDASVEDGEQAAAAPREAEG
GAAANIKGEVERVTLVTEATEEDIFHDAAQESVEHAKGGGDAAQEEEEEA
RSVAVKIQQVPEDEEEQANLLGELAMLRNHKHSHLVEFIGTAMAVERGSD
TVMVVMELCTNGALREALKLNIDWPLKVRIASDMTDGLQYLHQHGIIHRD
IKTPNVLIDGCWRAKLCDYNFAIDENSSIKQDFCAGTAEFMSPEVLLSEE
YGLPSDVFSLGMIFVEMLTGQEPSPSFPERPPQTFFVVSEEEIEGQLLPG
YPSSFSLLQSQCLFAEPAER
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mRNA from alignment at Scaffold_242:694559..698477-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft409_9a-0001 ID=EsuBft409_9a-0001|Name=EsuBft409_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3919bp|location=Sequence derived from alignment at Scaffold_242:694559..698477- (Ectocarpus subulatus male Bft15b)
GTCCCGCTCGCCGCGTCACAGGGTGAGCATGACTCTCGGCCCGACTGGGG
GCTTGCATTTGGCCCGAAAGCCTGAACACAACAGGTTCAGCAGCGGGGGA
ACAAGCATGGGGGCTGACCGAAACATAGGGCTGTCTGAGAACCCGAGCAT
TGCAAGCACGGCGGAGGAGGGCGTGAATGTGACAGAGGGGGAAGACGACG
GTCCGGTTGAGAGAGGGGATGAGGATGAGGAGGACAAGGCCGTCGGACCG
TTCACAGAGACCTCCTTGGAGATGGCGCGGTTACGCCTGCCGCACATGGA
GCTGGGGTTTGAAGAAGACGGCTTCTTCGGGATTGACGTGCGATCCCTGA
TTATCGGGAGGGAAATCGCACGAGGAGCTTATGGCGTGGTTCACGAAGGA
AAGCTATATCCGTCGCCGAGGGATGCAAGTGTTGAGGATGGAGAACAAGC
AGGTACCAGTATTCTACGATCAAGATGCTTCTAGCCGAATGTAGCCATAT
GTATACCACTAAGTATTACTGTGGCCGCCGCCTGTTGTGTGATGGAACGG
AATGCCTCGCAACAGGCGTTCTATCTAGCCAGGCTGGTGACTAGATTGGG
CCTTGCTCGCCTGTGCTGCCTGTCGCGGGGTTGAATTGCAGTGGGAGCTA
CGTTTGATCAGCGAGTCGATGCGGGGTCCGGTAACCAGAGCCATACCCAC
ATCCGATGTACTTCCGTGCAAATGCTCTCTGTGGACCCACCGCTATTGCT
AGGCGGGAAATCGCGTAGCTTGACTCCTGCTGGTGCATAGCTGGATGCGG
TTGATCCTTGCTACAACTTTCTACAACTTTCCCCACATGTTGTGGTGTGC
CCACTGTACCCATCCCATATCCCAAGCTCAACGTTCAATGTAGACGGAGT
CGTCGCAACTTCCACTGCTCGTGTATCGTAGCCGCCTCGTGACGCATGGC
GCATGAAGGACGTTTGCTGGAGTTCCACGCGCCGCCTTGCTTTGTCCTTT
GTACGCTTGCCATCCGAAGCAGCGGCTGCACCCAGGGAAGCAGAAGGTGG
CGCGGCTGCCAACATAAAGGGAGAGGTGGAGAGGGTTACACTTGTAACGG
AGGCGACGGAGGAGGACATTTTCCATGACGCTGCTCAAGAGAGCGTGGAA
CACGCCAAAGGAGGAGGGGATGCTGCACAGGAAGAGGAGGAGGAGGCGAG
GAGCGTGGCAGTAAAGATTCAACAAGTACCCGAGGACGAGGTATGTTGGT
AAACGCTGGGCGGTACAGATACAGGGTGTTTGTTTGGCAGAGCTGCCCAA
TATCTTCGAACAACATCAAGTTTCGGGCGGGTATTTTGGGGGATTCTAGC
GTCACAGGTTAGGGATTGTCTCCTGGTCACTCGGCGTAGGATTTTCTTGT
AGCGGTTTCTGGCCAGATTTGCGCGGCAGCAAAGACGGTAGATCGGACCT
CCGCCCGTCAGCCCGTCAGCCCGTCAGCCCGTCAGCCCGTCAGCCCGTCA
GCCCGTCAGCCCGTCAGCCAGTCAGCCAGTCAGCCAGTCAGCCAGTCGGC
CAGTCAGCCAGTCAGCCAGTCGGCCAGTCAGCCAGTCAGCCAGTCGGCCA
GTCAGCATTGAGCTGCTTGTTGGGAGAGACCCCTCGAGCTCCAGGTTCCC
GATAACGCCGAGCTAAATATCAAACCATGTATTTATCCAGCACAGGATTG
TCAGTGTGTTGGGGCGTTTCTAGCTGGATGATGAGTCTTTTCTTTCGTGC
GGCCGTAAGCGCAAGCAGCCGGTAAGCCGATCACAAGCTAACAAGAATAG
CTCCCACTCGTACAAGACAATTATTTATCAGTCTTATTTTAATCATGCTA
TCTACCGTTCGTGTTTCATGGTGGTGGCTGTGGTTGGTGCGAAACCGCCA
TAAACGCAGGAAGAGCAAGCCAACCTGCTGGGGGAGCTTGCGATGCTAAG
AAATCACAAGCACTCGCACCTCGTTGAGTTCATCGGAACGGCTATGGCCG
TGGAGAGAGGCTCTGACACGGTGAGAGACCAATCAAGGACAATCACGATT
TCCTGTGCTGGCCTGTAGCGGACGGGGTATGCATGATCGCCAAGGTTGAC
CTCAAGCAGAAGTGTACATGATGGCACAACGGAAACCGTGAGGAGCAAGG
GCTGGTTTTGGGTCGATTGAAGAGGTTGTAGATCCTTTGTCAATAAGCTC
CCGACGCGATGTTTAGCTTCTACCTGGGCGCCAAACTAGATTTGTTTCCT
ACTCGAGTACTCGATGAACGATCGCTTCTCTTGAGCGGATTGGTTGTCGT
TGGCCGGCTGGATGCCACAATTTTTTTTTCACGAGTTTGTGTGCTCCTTT
TTGTGCAGGTGATGGTGGTGATGGAATTGTGCACCAACGGGGCGTTGCGA
GAGGCGTTGAAACTTAACATCGACTGGCCACTCAAGGTACTTGCTCGCTG
AGAAATTAGTATTGTATTCATGTGTCGTGGGTGACCTGGTTCTACGGTAA
GCTGAAGGGCTAGTGGTTTCGTCCCTGAGGCATGTTTGCTCGACTTGGGT
GTACTCGACGTCACCCTCTGATGTGAGCAGTCTGTTTGTGGCTTGTCTTT
TCGTCGTTTCTCTCGTCACCCGTTCCTATTGTGCATCATAGGCCTCATGT
GCCCTCTAATTGGTTGTTTTGGTGAAGGACCTCGGGCATAAGGAATATGG
TAAATGAGGTTTCCCCTCGTGTCTTCTGATACGCAACCAGGGCGCCACAT
AGCTTAATGCTTCTATGCCTGTACCGCTGCTCGTTTTCCTGTTGCGAAGG
TACGAATCGCGTCAGACATGACGGATGGGCTGCAATACCTGCACCAACAC
GGTATCATCCACCGAGATATCAAAACCCCCAACGTTTTGATCGACGGCTG
CTGGAGAGCGAAGCTGTGCGACTACAACTTCGCCATCGACGAGAACAGCT
CCATCAAGCAGGTGCGACGACTGTTTTACCCGAACCCGTCTAGACGAAGC
AACACGCACGTATGAAGTTCTGAGTGCTGCGCTGCAGGCACTGAGCGCAG
TGAGCATCAGCTTGTGGAGCCTTAAGTTCCCCTCCCCTCCCCACGTCCAC
GACCGAGAGCTCCCTTCCCACCAGTCCTTCTCTGTCATTTGTCGAACGAT
TCGACGTTGGGGTACTATTTCTGCGTCGAGCGATATCCCAACTACGTTTA
GGTTTGCTGTACGATACATTGCTTTCACATTCTCATCGCTGGCTGTGTCC
GCGTTTGTGGCAGGACTTTTGCGCGGGAACGGCGGAGTTCATGTCTCCCG
AGGTGTTGCTCTCGGAGGAGTACGGGCTACCGAGTGACGTCTTCAGCCTG
GGCATGATATTTGTAGAGATGCTTACGGGTCAGGAACCAAGTCCTTCCTT
CCCGGAGAGGCCGCCACAGGTACGTCTGGGCGTCCCAGAGACGACCGACC
CTTTGCGAGACAATATTTGTTGGTGACTTGATAAGCGGAGGCACCTCCCT
ATTTTGTCTACCCGAACGTACGAAGAGCCCTTGGACGTGTTTTCAGTACC
AGTTATACACTCGTCGTGTTGATGCACCCCGAGGTGAAAAGCTCCAGTTT
CAGCACTGTCCCTTCGAGTCGAGTGGAAGCTACTCCCTCGCTTTTGGATT
TGATGCGTTTGCCGGCGTGTGAGATGTTTTCTACACTACATCAAACTTGT
GTTGGGTGCCGATCGCACTTCACTTGTTTTGCCACTGCTTGCCCCAACTC
TCTCCCGGCGCTGACGTTGGCGCGCCATGTCTCGATACGCCCCTGTTGTT
GGCAGACGTTTTTCGTCGTGAGCGAGGAGGAGATAGAGGGGCAGCTGCTG
CCAGGGTATCCTTCGTCGTTCTCGCTTTTGCAGTCGCAATGCCTCTTCGC
CGAACCAGCCGAGAGGTGA
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Coding sequence (CDS) from alignment at Scaffold_242:694559..698477-

>EsuBft409_9a-0001 ID=EsuBft409_9a-0001|Name=EsuBft409_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1263bp|location=Sequence derived from alignment at Scaffold_242:694559..698477- (Ectocarpus subulatus male Bft15b)
ATGACTCTCGGCCCGACTGGGGGCTTGCATTTGGCCCGAAAGCCTGAACA
CAACAGGTTCAGCAGCGGGGGAACAAGCATGGGGGCTGACCGAAACATAG
GGCTGTCTGAGAACCCGAGCATTGCAAGCACGGCGGAGGAGGGCGTGAAT
GTGACAGAGGGGGAAGACGACGGTCCGGTTGAGAGAGGGGATGAGGATGA
GGAGGACAAGGCCGTCGGACCGTTCACAGAGACCTCCTTGGAGATGGCGC
GGTTACGCCTGCCGCACATGGAGCTGGGGTTTGAAGAAGACGGCTTCTTC
GGGATTGACGTGCGATCCCTGATTATCGGGAGGGAAATCGCACGAGGAGC
TTATGGCGTGGTTCACGAAGGAAAGCTATATCCGTCGCCGAGGGATGCAA
GTGTTGAGGATGGAGAACAAGCAGCGGCTGCACCCAGGGAAGCAGAAGGT
GGCGCGGCTGCCAACATAAAGGGAGAGGTGGAGAGGGTTACACTTGTAAC
GGAGGCGACGGAGGAGGACATTTTCCATGACGCTGCTCAAGAGAGCGTGG
AACACGCCAAAGGAGGAGGGGATGCTGCACAGGAAGAGGAGGAGGAGGCG
AGGAGCGTGGCAGTAAAGATTCAACAAGTACCCGAGGACGAGGAAGAGCA
AGCCAACCTGCTGGGGGAGCTTGCGATGCTAAGAAATCACAAGCACTCGC
ACCTCGTTGAGTTCATCGGAACGGCTATGGCCGTGGAGAGAGGCTCTGAC
ACGGTGATGGTGGTGATGGAATTGTGCACCAACGGGGCGTTGCGAGAGGC
GTTGAAACTTAACATCGACTGGCCACTCAAGGTACGAATCGCGTCAGACA
TGACGGATGGGCTGCAATACCTGCACCAACACGGTATCATCCACCGAGAT
ATCAAAACCCCCAACGTTTTGATCGACGGCTGCTGGAGAGCGAAGCTGTG
CGACTACAACTTCGCCATCGACGAGAACAGCTCCATCAAGCAGGACTTTT
GCGCGGGAACGGCGGAGTTCATGTCTCCCGAGGTGTTGCTCTCGGAGGAG
TACGGGCTACCGAGTGACGTCTTCAGCCTGGGCATGATATTTGTAGAGAT
GCTTACGGGTCAGGAACCAAGTCCTTCCTTCCCGGAGAGGCCGCCACAGA
CGTTTTTCGTCGTGAGCGAGGAGGAGATAGAGGGGCAGCTGCTGCCAGGG
TATCCTTCGTCGTTCTCGCTTTTGCAGTCGCAATGCCTCTTCGCCGAACC
AGCCGAGAGGTGA
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