|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 4641.GSMUA_Achr11P16260_001 |
| ProteomeId | EsuBft409_11 |
| Protein domains | IPR029033 |
| Protein domains | IPR013078 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 35493|Streptophyta |
| Length | 240 |
| Hectar predicted targeting category | other localisation |
| Evalue | 8.67e-05 |
| EggNOG OGs | COG0406@1|root,KOG3734@2759|Eukaryota,37PM0@33090|Viridiplantae,3G7KU@35493|Streptophyta,3KV50@4447|Liliopsida |
| Ec32 ortholog description | Histidine phosphatase superfamily, clade-1 |
| Ec32 ortholog | Ec-15_002240.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | Histidine phosphatase superfamily (branch 1) |
| COG category | G |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft409_11a-0001 ID=EsuBft409_11a-0001|Name=EsuBft409_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2403bp|location=Sequence derived from alignment at Scaffold_242:661995..666183+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTTTCCTCCCGACCAGCCAGTGCCACCACCAATATGGGCGACGGGGAGAA ACCATCGTGGCTTGGGAGCATGATAGATCAAGTCGATAGGTTGGCGCTGA AGATCGGAGGCTACGAAGAACCCAAGCCTCCAGGAAACGGATTCTCGGAC GACGAATCGGACAGCAACAGCACAAACAGCGGCAGCAGCAGCGAGGACGA GGATTCAGGCGACTCTGGTTTCGAAGACACCGCGGAAGACGACGACGATT CTGGTTTCGAAGACGCGGGTCCATCGCCTGTTTTGAAAACAAGGACGGAA TACAAAGAGGAGGCTGCGGAAGGCGGAGATGCTCCGCAGTCCGACGATCT CGAGCCGATGAAACCCGAACAATCCTCAAAGCAGATACCGCCTGTGTCAA TTGCGGATAATATACCCTCTCTCTCGGTTAGGCGGTCACAAACCAGCCAA GAAAACTGCGACGAGAACGATGTTCAAGGCTCGGAGGAAAAACCTCTTGG CAAGGAGTACCCACAGGTCGTATCAAGCGGGGACAATGCGCCGTTGGATT CGGCAACATCTTCACGCAGCGAAGGCCTGTTAACTAAGGACGATGTGCCA GTGTTGGAGGGAGACCTTCCTAGACCACAAGGAGATGGAAACTCTCCTCG ACAGCCACTGGATGTCGTCGGCGACGTGGATTCCACGTTTAGCACTCCTG CTCACAGCCGAGACCGCGACGCGCTCAGAAAAGGGCCGCCTCTGGATGCT GTACCTGTTGCTAGCAGTGCGGGCAGCCGGCGTGTGAATCGCGAAAAAAA AAACAACGAAGGTCTCAACGCGAAGTCGCCCATGAACACACAGATCTTAA AGGATGCAGGGCACGTATCGCCGTCTGGAGCGCCGCGCCTCCCAGGGAGC AAGAAGAAAAAGAACTTTTCCTACGTGAGCGACACCACATGGATTAAGCC AAAGGAGGAACTGGCCGCCGAAACCTCCTCTCCACCGCTGGAGCTTGCGT CAAGAGCTGCCGTGACCGGTGGGCATGCTCCGAGCCAAGTACCTCCTGCC AGAAAGCCTCTTGCGTCAGATTGTGCCGCCGCCGAGGCTACGGAGGGCGC TGCTGAGGTCGATCAATCGTCGACACCACGGAGAAATCGGCATCGACCCC CACGGGAAAAGGATCACGGGCTTAAGAAAGCTGACACAGATTTTCCGATG GAGACGCGACCGGAAGAGCCTTTGCATGTGCGTGCCGAGGATGGAAAGAG CAACGGCGGGAGGATGCCAGTGACAGAAGAAATCGCCGAGGCGGTTGCCC TGGCGCACCCGGAGGGTAGGCCCGCCCCAGACGAAACAGTGACAACACAT CTCCCCGAAGATCAGGCCGATGCGAACGGGCTCGAAGAGCCACACGAAAG AGAGAACGGGACTGGCCACGCACGGGCTTTCCAGGAGGGAGGCTATCAAG AAGAAGCGCGCCAGGGGATAGACGACAGGGATGAGGTAGAACCTGGTATC TGGAACGAGGGGGTGGCCACGATCGGCGCAAAGAGAATGTCGTCTGAGAA CGGTATGGGTTCTCCGGCAGAGGAATGGATTCTTGACTCTCCGGAGGGAT TCGCTCCTTCCAAACGAGGAAAGCTGCAATCGGAACACCCCCTGGCCGTG ATGCGCCACTCGGCTCGTCTGGACGACGCCATATTCGAGCGACAACGAAT GCTCGGGGCAATCACGGCGGGTAGCGGGAGCGACGAGGATGTCGCCAAAA AGGCGGTCAGCGACGGAAGCAAGGGCTTGGAGAGTGGCGACGGGGACGAG TTAGCGGCGGTACCTTGGCCTGACAGGGCGCTCCGGCCTTACGATCCTCC GATAGTCGACACCGATCTTCCCGCTCGACAAGCGAAGGCACTCGGCCGGC TCGGAATGGGCTCGCAAACCGTGATAGTTTGCTCTCCGTTCCGACGTTGC CTTCAGACGGCCGGCGTGGTTGCCCGGACGCTAGGCGTGGCAAGTGTTAC GGTACACTTGCAAGTAGGAGAACGCATGGACAAGGTGCGCAAGGAGATCG CAGAGCTGGCTTTGGACAGCGAGGAGCGATCGGATGGCACCTTAGCAACG AAGGAGGCGGTCCCGGCGTTCAGCTACCTAGAGGAAGCGGACATGCGCGC GGCACTCGGAGCAGGAGTGCAGTTAGAAAGAATAATCGGGGAACAGCCGC CAGAGGAGGAGAGCGGAATAGAAGCAAAACAGCGTTTTATAGCCACTATC GCGAAAGTGCGTGAAGAGCAACTGCGTGATAGTCCTGTGCTGGTGGTGGC CCACGGAGACACGCTGGACGCTGCTGGCGAATCCCTAGCGTCTCAGATTG TTTTCGAAGGTCAGATGATCTGTGCCGCCATGTATAGCTCACCACCTGTG TAG back to topprotein sequence of EsuBft409_11a-0001 >EsuBft409_11 ID=EsuBft409_11|Name=EsuBft409_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=789bp
MGDGEKPSWLGSMIDQVDRLALKIGGYEEPKPPGNGFSDDESDSNSTNSG SSSEDEDSGDSGFEDTAEDDDDSGFEDAGPSPVLKTRTEYKEEAAEGGDA PQSDDLEPMKPEQSSKQIPPVSIADNIPSLSVRRSQTSQENCDENDVQGS EEKPLGKEYPQVVSSGDNAPLDSATSSRSEGLLTKDDVPVLEGDLPRPQG DGNSPRQPLDVVGDVDSTFSTPAHSRDRDALRKGPPLDAVPVASSAGSRR VNREKKNNEGLNAKSPMNTQILKDAGHVSPSGAPRLPGSKKKKNFSYVSD TTWIKPKEELAAETSSPPLELASRAAVTGGHAPSQVPPARKPLASDCAAA EATEGAAEVDQSSTPRRNRHRPPREKDHGLKKADTDFPMETRPEEPLHVR AEDGKSNGGRMPVTEEIAEAVALAHPEGRPAPDETVTTHLPEDQADANGL EEPHERENGTGHARAFQEGGYQEEARQGIDDRDEVEPGIWNEGVATIGAK RMSSENGMGSPAEEWILDSPEGFAPSKRGKLQSEHPLAVMRHSARLDDAI FERQRMLGAITAGSGSDEDVAKKAVSDGSKGLESGDGDELAAVPWPDRAL RPYDPPIVDTDLPARQAKALGRLGMGSQTVIVCSPFRRCLQTAGVVARTL GVASVTVHLQVGERMDKVRKEIAELALDSEERSDGTLATKEAVPAFSYLE EADMRAALGAGVQLERIIGEQPPEEESGIEAKQRFIATIAKVREEQLRDS PVLVVAHGDTLDAAGESLASQIVFEGQMICAAMYSSPPV back to topmRNA from alignment at Scaffold_242:661995..666183+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft409_11a-0001 ID=EsuBft409_11a-0001|Name=EsuBft409_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4189bp|location=Sequence derived from alignment at Scaffold_242:661995..666183+ (Ectocarpus subulatus male Bft15b) CTTTCCTCCCGACCAGCCAGTGCCACCACCAATATGGGCGACGGGGAGAA
ACCATCGTGGCTTGGGAGCATGATAGATCAAGTCGATAGGTTGGCGCTGA
AGATCGGAGGCTACGAAGAACCCAAGCCTCCAGGTGAGAAAATTGTTCCT
ACCTCTCTCTCCCGTTGTGTGTATCATGCTTGCCCGGCCTGTAGCACCCT
AGACTAGACCTGTAGGTAGTTTTTCCGAGTGTGTGCATATGTGCATGCAG
CATCGCGGGTACTCTACCCAATGAGGTATTCGTGTCCTACTGCTGCTCGT
GCCATCTGATTGTTTCACAAGCTCCTTACACAGACACAATTATTGTAGTG
TGTGTGGATATTGATAATGGTCGTTCTTCCACGGTTGCATCGAACAGGAA
ACGGATTCTCGGACGACGAATCGGACAGCAACAGCACAAACAGCGGCAGC
AGCAGCGAGGACGAGGATTCAGGCGACTCTGGTTTCGAAGACACCGCGGA
AGACGACGACGATTCTGGTTTCGAAGACGCGGGTCCATCGCCTGTTTTGA
AAACAAGGACGGAATACAAAGAGGAGGCTGCGGAAGGCGGAGATGCTCCG
CAGTCCGACGATCTCGAGCCGATGAAACCCGAACAATCCTCAAAGCAGAT
ACCGCCTGTGTCAATTGCGGATAATATACCCTCTCTCTCGGTTAGGCGGT
CACAAACCAGCCAAGAAAACTGCGACGAGAACGATGTTCAAGGCTCGGAG
GAAAAACCTCTTGGCAAGGAGTACCCACAGGTCGTATCAAGCGGGGACAA
TGCGCCGTTGGATTCGGCAACATCTTCACGCAGCGAAGGCCTGTTAACTA
AGGACGATGTGCCAGTGTTGGAGGGAGACCTTCCTAGACCACAAGGAGAT
GGAAACTCTCCTCGACAGCCACTGGATGTCGTCGGCGACGTGGATTCCAC
GTTTAGCACTCCTGCTCACAGCCGAGACCGCGACGCGCTCAGAAAAGGGC
CGCCTCTGGATGCTGTACCTGTTGCTAGCAGTGCGGGCAGCCGGCGTGTG
AATCGCGAAAAAAAAAACAACGAAGGTCTCAACGCGAAGTCGCCCATGAA
CACACAGATCTTAAAGGATGCAGGGCACGTATCGCCGTCTGGAGCGCCGC
GCCTCCCAGGGAGCAAGAAGAAAAAGAACTTTTCCTACGTGAGCGACACC
ACATGGATTAAGCCAAAGGAGGAACTGGCCGCCGAAACCTCCTCTCCACC
GCTGGAGCTTGCGTCAAGAGCTGCCGTGACCGGTGGGCATGCTCCGAGCC
AAGTACCTCCTGCCAGAAAGCCTCTTGCGTCAGATTGTGCCGCCGCCGAG
GCTACGGAGGGCGCTGCTGAGGTCGATCAATCGTCGACACCACGGAGAAA
TCGGCATCGACCCCCACGGGAAAAGGATCACGGGCTTAAGAAAGCTGACA
CAGGTTCGCGAAGAGTCCGAGTTGTGTAAGGTCTTGTGTATGTCAAACAT
CATGTTTTCCCATTACCCTTTTCGGTCTACAGGCGTCCTGACAGATGATT
GATTGATCATTTGTAAATGGTGTTGTGGCATGCCATGGAGTTGCCGCCCT
GTATCCCTCCACGCCAGGTGTTGGCAAGTCAATAGGTAGGTGTGTCTTTA
TTATTCGCGTCGACCGCGTTACCCGATACTATTGAAAAGACGTTGGTGCC
AGCGGAAAAAAGGTCCCTGGAACGGCAAAATAAAAAAAATGCACACTGCT
CTAAATACGAATGCCACCACGAATCTCTCCCCATATCCTTTCACAGGGAG
ACACATCAATAGCTCCACATAGATGCCCTCGCCCGAATCTAGGAAGCCAC
TAAAGCAAAAGCAGGAGGACAGCGAAAGGGGGCATTTCAAGCCCAACCAG
GCCAGGATATCGTGGTATGCTACATATTCTCCAAATTTGAAAATCGTAAT
ACTCCCACGATCCAGCAGTCGTTGTGTCGGCAGCTATACTACACAGCAGC
AGCAGTATCAACATACAGTAGTAACATATACACTATCATCATAGCCCCAC
ATATACCCTCGCCCGAACCTAGAGAGCCACTGATGCAAAGGTAAAGTGTG
TGCTGGTGAGCCTGCGTGCTTGTGGGAATCGCGAAAATCACAGGAGCTGT
AGTGAGCCGGCAGGGCTCACATTGGGGAGGGGAAAGAGAAGTACAGAAGT
ACAAAAAACAGCTATGGGTCTACAAGCCCTCTCACTGATCGTTTCCACTG
ATCACTTGAATATACTGAAACTAGAGTAGTTTAGGTGGCTTGACGACTGA
TCTTTTCGAGGTCTACAAGCCTAAACTGCGCTACTGGCCGCACCGCGACC
ACGCATCAACCCTTCCATGATACTGTCTGTGTCCACCGTCCTGTCGCGGA
CTGCCCTCATGGCCTATGGGTGGAGATAGCTGTTGCGTCTACAGAAGTTG
TTTCTGCTGTACTTGTGTGTGTCTCTCTCTCCCGCACACTCTCTTCCCTT
TCTGTTGTTTTGTCCGGAAGAACATTTCCCTTCAGAAAAAGAAGACCTAG
CCCCAAAGGGGTTAAACACGAGCGTGCATAAAATTCATCACATGAGGCCG
AGGTTTCCTTTTACTTCAATTACGAACAACCGTCTTAGATGCCTCCTGAC
AACCGTACCGTGTTGAGCAGCCCGCCAGATGTGGTCTTTGAGACGATTAA
TGCCAGAGAAGCGAGAAACAAAGAGGGAAACCTCCGATGTAGATGGTGGT
GCGGGATGAAGAGAGAAAGAAGTCATCATTGCAATATCAGCTGATTGGGT
GCATGCGGGAATGGCATCCTTGTTATGTCCCCTTGACACCTGAAACCGAA
CCGCCTCCACCCCCTCAGATTTTCCGATGGAGACGCGACCGGAAGAGCCT
TTGCATGTGCGTGCCGAGGATGGAAAGAGCAACGGCGGGAGGATGCCAGT
GACAGAAGAAATCGCCGAGGCGGTTGCCCTGGCGCACCCGGAGGGTAGGC
CCGCCCCAGACGAAACAGTGACAACACATCTCCCCGAAGATCAGGCCGAT
GCGAACGGGCTCGAAGAGCCACACGAAAGAGAGAACGGGACTGGCCACGC
ACGGGCTTTCCAGGAGGGAGGCTATCAAGAAGAAGCGCGCCAGGGGATAG
ACGACAGGGATGAGGTAGAACCTGGTATCTGGAACGAGGGGGTGGCCACG
ATCGGCGCAAAGAGAATGTCGTCTGAGAACGGTATGGGTTCTCCGGCAGA
GGAATGGATTCTTGACTCTCCGGAGGGATTCGCTCCTTCCAAACGAGGAA
AGCTGCAATCGGAACACCCCCTGGCCGTGATGCGCCACTCGGCTCGTCTG
GACGACGCCATATTCGAGCGACAACGAATGCTCGGGGCAATCACGGCGGG
TAGCGGGAGCGACGAGGATGTCGCCAAAAAGGCGGTCAGCGACGGAAGCA
AGGGCTTGGAGAGTGGCGACGGGGACGAGTTAGCGGCGGTACCTTGGCCT
GACAGGGCGCTCCGGCCTTACGATCCTCCGATAGTCGACACCGATCTTCC
CGCTCGACAAGCGAAGGCACTCGGCCGGCTCGGAATGGGCTCGCAAACCG
TGATAGTTTGCTCTCCGTTCCGACGTTGCCTTCAGACGGCCGGCGTGGTT
GCCCGGACGCTAGGCGTGGCAAGTGTTACGGTACACTTGCAAGTAGGAGA
ACGCATGGACAAGGTGCGCAAGGAGATCGCAGAGCTGGCTTTGGACAGCG
AGGAGCGATCGGATGGCACCTTAGCAACGAAGGAGGCGGTCCCGGCGTTC
AGCTACCTAGAGGAAGCGGACATGCGCGCGGCACTCGGAGCAGGAGTGCA
GTTAGAAAGAATAATCGGGGAACAGCCGCCAGAGGAGGAGAGCGGAATAG
AAGCAAAACAGCGTTTTATAGCCACTATCGCGAAAGTGCGTGAAGAGCAA
CTGCGTGATAGTCCTGTGCTGGTGGTGGCCCACGGAGACACGCTGGACGC
TGCTGGCGAATCCCTAGCGTCTCAGATTGTTTTCGAAGGTGAGATCTTTC
GTGGTGCTCGTGCCGTGTGTGATGTTCTAAGCGATTACTCAAACGTATCT
CTTCGATCATTTTATACCGCTGTCCTGTATGCTGTGTTACTGCAGGTCAG
ATGATCTGTGCCGCCATGTATAGCTCACCACCTGTGTAG back to topCoding sequence (CDS) from alignment at Scaffold_242:661995..666183+ >EsuBft409_11a-0001 ID=EsuBft409_11a-0001|Name=EsuBft409_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2370bp|location=Sequence derived from alignment at Scaffold_242:661995..666183+ (Ectocarpus subulatus male Bft15b) ATGGGCGACGGGGAGAAACCATCGTGGCTTGGGAGCATGATAGATCAAGT CGATAGGTTGGCGCTGAAGATCGGAGGCTACGAAGAACCCAAGCCTCCAG GAAACGGATTCTCGGACGACGAATCGGACAGCAACAGCACAAACAGCGGC AGCAGCAGCGAGGACGAGGATTCAGGCGACTCTGGTTTCGAAGACACCGC GGAAGACGACGACGATTCTGGTTTCGAAGACGCGGGTCCATCGCCTGTTT TGAAAACAAGGACGGAATACAAAGAGGAGGCTGCGGAAGGCGGAGATGCT CCGCAGTCCGACGATCTCGAGCCGATGAAACCCGAACAATCCTCAAAGCA GATACCGCCTGTGTCAATTGCGGATAATATACCCTCTCTCTCGGTTAGGC GGTCACAAACCAGCCAAGAAAACTGCGACGAGAACGATGTTCAAGGCTCG GAGGAAAAACCTCTTGGCAAGGAGTACCCACAGGTCGTATCAAGCGGGGA CAATGCGCCGTTGGATTCGGCAACATCTTCACGCAGCGAAGGCCTGTTAA CTAAGGACGATGTGCCAGTGTTGGAGGGAGACCTTCCTAGACCACAAGGA GATGGAAACTCTCCTCGACAGCCACTGGATGTCGTCGGCGACGTGGATTC CACGTTTAGCACTCCTGCTCACAGCCGAGACCGCGACGCGCTCAGAAAAG GGCCGCCTCTGGATGCTGTACCTGTTGCTAGCAGTGCGGGCAGCCGGCGT GTGAATCGCGAAAAAAAAAACAACGAAGGTCTCAACGCGAAGTCGCCCAT GAACACACAGATCTTAAAGGATGCAGGGCACGTATCGCCGTCTGGAGCGC CGCGCCTCCCAGGGAGCAAGAAGAAAAAGAACTTTTCCTACGTGAGCGAC ACCACATGGATTAAGCCAAAGGAGGAACTGGCCGCCGAAACCTCCTCTCC ACCGCTGGAGCTTGCGTCAAGAGCTGCCGTGACCGGTGGGCATGCTCCGA GCCAAGTACCTCCTGCCAGAAAGCCTCTTGCGTCAGATTGTGCCGCCGCC GAGGCTACGGAGGGCGCTGCTGAGGTCGATCAATCGTCGACACCACGGAG AAATCGGCATCGACCCCCACGGGAAAAGGATCACGGGCTTAAGAAAGCTG ACACAGATTTTCCGATGGAGACGCGACCGGAAGAGCCTTTGCATGTGCGT GCCGAGGATGGAAAGAGCAACGGCGGGAGGATGCCAGTGACAGAAGAAAT CGCCGAGGCGGTTGCCCTGGCGCACCCGGAGGGTAGGCCCGCCCCAGACG AAACAGTGACAACACATCTCCCCGAAGATCAGGCCGATGCGAACGGGCTC GAAGAGCCACACGAAAGAGAGAACGGGACTGGCCACGCACGGGCTTTCCA GGAGGGAGGCTATCAAGAAGAAGCGCGCCAGGGGATAGACGACAGGGATG AGGTAGAACCTGGTATCTGGAACGAGGGGGTGGCCACGATCGGCGCAAAG AGAATGTCGTCTGAGAACGGTATGGGTTCTCCGGCAGAGGAATGGATTCT TGACTCTCCGGAGGGATTCGCTCCTTCCAAACGAGGAAAGCTGCAATCGG AACACCCCCTGGCCGTGATGCGCCACTCGGCTCGTCTGGACGACGCCATA TTCGAGCGACAACGAATGCTCGGGGCAATCACGGCGGGTAGCGGGAGCGA CGAGGATGTCGCCAAAAAGGCGGTCAGCGACGGAAGCAAGGGCTTGGAGA GTGGCGACGGGGACGAGTTAGCGGCGGTACCTTGGCCTGACAGGGCGCTC CGGCCTTACGATCCTCCGATAGTCGACACCGATCTTCCCGCTCGACAAGC GAAGGCACTCGGCCGGCTCGGAATGGGCTCGCAAACCGTGATAGTTTGCT CTCCGTTCCGACGTTGCCTTCAGACGGCCGGCGTGGTTGCCCGGACGCTA GGCGTGGCAAGTGTTACGGTACACTTGCAAGTAGGAGAACGCATGGACAA GGTGCGCAAGGAGATCGCAGAGCTGGCTTTGGACAGCGAGGAGCGATCGG ATGGCACCTTAGCAACGAAGGAGGCGGTCCCGGCGTTCAGCTACCTAGAG GAAGCGGACATGCGCGCGGCACTCGGAGCAGGAGTGCAGTTAGAAAGAAT AATCGGGGAACAGCCGCCAGAGGAGGAGAGCGGAATAGAAGCAAAACAGC GTTTTATAGCCACTATCGCGAAAGTGCGTGAAGAGCAACTGCGTGATAGT CCTGTGCTGGTGGTGGCCCACGGAGACACGCTGGACGCTGCTGGCGAATC CCTAGCGTCTCAGATTGTTTTCGAAGGTCAGATGATCTGTGCCGCCATGT ATAGCTCACCACCTGTGTAG back to top
|