Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft4056_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 24 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4056_3a-0001 ID=EsuBft4056_3a-0001|Name=EsuBft4056_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=245bp|location=Sequence derived from alignment at Scaffold_265:71281..71614+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
AATTTACCCTCAACTGGGAACCTCTTGTGGCCAGGATGGGTAATTCGATG
GAAGTGTCACAAGGTCTCTCTGTAGGATCGACTCCAAGAGGTGTTCTCAG
GACTGACAAACATTGTGCCCTTGGGAAGATATCCAAGTCAGGAGATAAAG
TGTGCACCCAAGGAGATTCGAACCAGTATCCAGCTGACGCCACATGCGAA
GGTGTACCGATCCAGCCGGCAGCGGAAGGAGGAAAGTCCAAGTAG back to topprotein sequence of EsuBft4056_3a-0001 >EsuBft4056_3 ID=EsuBft4056_3|Name=EsuBft4056_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=69bp
MGNSMEVSQGLSVGSTPRGVLRTDKHCALGKISKSGDKVCTQGDSNQYPA
DATCEGVPIQPAAEGGKSK back to topmRNA from alignment at Scaffold_265:71281..71614+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4056_3a-0001 ID=EsuBft4056_3a-0001|Name=EsuBft4056_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=334bp|location=Sequence derived from alignment at Scaffold_265:71281..71614+ (Ectocarpus subulatus male Bft15b)
AATTTACCCTCAACTGGGAACCTCTTGTGGCCAGGATGGGTAATTCGATG
GAAGTGTCACAAGGTCTCTCTGTAGGATCGACTCCAAGAGGTGTTCTCAG
GACTGACAAACATTGTGCCCTTGGGAAGATATCCAAGTCAGGAGATAAAG
TGTGCACCCAAGGAGATTCGAACCAGTATCCAGCTGACGCCACATGCGAA
GGTGTACCGATCCAGGTAAAAGTCAATCGACGGATATCCTGCGAATTGGG
TTCTCCTTAACACAGTACACCAGTTTGTAGTTGGCCACCTAATGTGCTTC
ATAGCCGGCAGCGGAAGGAGGAAAGTCCAAGTAG back to topCoding sequence (CDS) from alignment at Scaffold_265:71281..71614+ >EsuBft4056_3a-0001 ID=EsuBft4056_3a-0001|Name=EsuBft4056_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=210bp|location=Sequence derived from alignment at Scaffold_265:71281..71614+ (Ectocarpus subulatus male Bft15b)
ATGGGTAATTCGATGGAAGTGTCACAAGGTCTCTCTGTAGGATCGACTCC
AAGAGGTGTTCTCAGGACTGACAAACATTGTGCCCTTGGGAAGATATCCA
AGTCAGGAGATAAAGTGTGCACCCAAGGAGATTCGAACCAGTATCCAGCT
GACGCCACATGCGAAGGTGTACCGATCCAGCCGGCAGCGGAAGGAGGAAA
GTCCAAGTAG back to top
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