Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 102129.Lepto7375DRAFT_7442 |
| ProteomeId | EsuBft4056_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2|Bacteria |
| Length | 88 |
| Hectar predicted targeting category | other localisation |
| Evalue | 8.54e-08 |
| EggNOG OGs | COG2813@1|root,COG2813@2|Bacteria,1GAGN@1117|Cyanobacteria,1HHWT@1150|Oscillatoriales |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
| Description | Specifically methylates the guanine in position |
| COG category | J |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4056_2a-0001 ID=EsuBft4056_2a-0001|Name=EsuBft4056_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=885bp|location=Sequence derived from alignment at Scaffold_265:73404..74999+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GAAACATCATGGAAGGACGGCCCACCAGCAGCACCAGCAAGACGTGCGAC
GCGTGTCTTCGAGAAGACGACGAAGCAGGGTATCGGCAGCTGAGGCCAAG
GACCATGAGCATGTTGCGGGCTTTCGTTCGTAATGCTGGACTGGCGGAGA
AGTTCCCCGGCGTGATGCCTCTTGGTGTCGGTATAGATTCCTTGGTTCTA
TGCAAACGTGCTGAATGTGTTTTGAAGCAATACGACAAGCATATGTCGGA
CTTGTGTCACGACCGAGCGCGTAAGAAAGAGAAACGCAACCGTAGCGAAG
CTGCAACTTGGACTTCCGCACCTGAGCCCGCAGTGCATCTGAAACGGCGA
CACTTGGACCGCTACTGTACATCGATCGTGGCGGTGGAGGCGTTGCTTGA
TGCTGTCAACGTCAGCGGCAGGGTGTTGGATATGTGTGGGGGGCCGGATG
ATGCCGTGGCACGGAGACTTCGAGACACGTGTGAGGTGGTAACGAACGAC
GTGAGTAGCAGCCTCGACGCAAGCAAGAGTACTTTCGCGGCGGATTTCCT
GGCAGACGGGTTTGAACAGCAACCTGAATGGGTGGTGACAAGCCCCCCCT
ACAAGGGGGCTGTCAAATTTGGGAAGGCGGCTCTATCTGTAGCCAAACAT
GGTGTGACGCTCAAACTACCCCTTTCCTTTCTGGAGCCTTGTGTAGATCG
GGCAGACTGGCTGGAGGCAAACCCCCCGACTGTTTGCGTGTTTTTAAGGA
GGGCCAGCTACACGCCTGAGCACATAATGATGGGGGAATTTTGGGGGGTA
TGGTACTGCACGGGTGGTGACCGAACGGCGGTGGGTGGTACAAAGCTTGT
GTTCCGTGCTTGATGTTGAACACGGTTGGGATGTT back to topprotein sequence of EsuBft4056_2a-0001 >EsuBft4056_2 ID=EsuBft4056_2|Name=EsuBft4056_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=284bp
MEGRPTSSTSKTCDACLREDDEAGYRQLRPRTMSMLRAFVRNAGLAEKFP
GVMPLGVGIDSLVLCKRAECVLKQYDKHMSDLCHDRARKKEKRNRSEAAT
WTSAPEPAVHLKRRHLDRYCTSIVAVEALLDAVNVSGRVLDMCGGPDDAV
ARRLRDTCEVVTNDVSSSLDASKSTFAADFLADGFEQQPEWVVTSPPYKG
AVKFGKAALSVAKHGVTLKLPLSFLEPCVDRADWLEANPPTVCVFLRRAS
YTPEHIMMGEFWGVWYCTGGDRTAVGGTKLVFRA back to topmRNA from alignment at Scaffold_265:73404..74999+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4056_2a-0001 ID=EsuBft4056_2a-0001|Name=EsuBft4056_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1596bp|location=Sequence derived from alignment at Scaffold_265:73404..74999+ (Ectocarpus subulatus male Bft15b)
GAAACATCATGGAAGGACGGCCCACCAGCAGCACCAGCAAGACGTGCGAC
GCGTGTCTTCGAGAAGACGACGAAGCAGGGTATCGGCAGCTGAGGCCAAG
GACCATGAGCATGTTGCGGGCTTTCGTTCGTAATGCTGGACTGGCGGAGA
AGTTCCCCGGCGTGATGCCTCTTGGTGTCGGTATAGATTCCTTGGTTCTA
TGCAAACGTGCTGAATGTGTTTTGAAGCAATACGACAAGCATATGTCGGA
CTTGTGTCACGACCGAGCGCGTAAGAAAGAGAAACGCAACCGTAGCGAAG
CTGCAACTTGGACTTCCGCACCTGAGCCCGCAGTGCATCTGAAACGGCGA
CACTTGGACCGCTACTGTACATCGATCGTGGCGGTGGAGGCGTTGCTTGA
TGCTGTCAACGTCAGCGGCAGGGTGTTGGATATGTGTGGGGGGCCGGATG
ATGCCGTGGCACGGAGACTTCGAGACACGTGTGAGGTGGTAACGAACGAC
GTGAGTAGCAGGTGCTTTTTTGTAGTTTTAAGGACTGAGGATGGTGCTCG
TAAGAATACATTTTTACTTTTCTACGTAGACGAACGCGGAAATATGCGAC
CGTGAGTTTGCAGCTGTGATGGCATTTTGCCAACGGCGTTTTTAGCACGA
ATCTATCACGTGTATTTTTTGCTGGTGTTGCAGTTTTGGTCTATCAAAAT
CAACAAGTACGGATGGGCACTCAACAGCAGGGATATGGGGGTACTCGGAG
AACAGAGGCAGAGGACCTATGTTGCAACCCTATCGCGAGCAGTATGGCCT
TTTTATCTTGACCGTCGATCCTCTCTCCCGAAAGCTTGATATGCGGCCTC
CTTGGCCCTTTTTTTTGTTGCAGGTTGTCACCTGTGTGTGATAAAGGCTT
ACCCCATTAGACTACGAAGTCAGCGGCTGACTTAGTAGTCTAGACTACTG
GGGTAAGCCTTTCTCACACAAAGGATACACGCACAGGTTCGAATCCCGGG
CTGATCACTTTACGAAAAGCACCATAGCTCTGTTCTCGGCAGCGCCTGGC
GAGGGGTCCGTCCCCGGAGATTTCTACTCACAGCCCGGGGTTCTACGAGC
CGAGAGTGTATCTTTTGATAGTTAAAGGCGTACCCATTAGACTACTCAGT
CAGCGCTGACTAAGTAGTCTAATGGGTAAGCCTTTACTAACAACCTGATG
CTCGGCGTGCCCCGGACACTAGCCTCGACGCAAGCAAGAGTACTTTCGCG
GCGGATTTCCTGGCAGACGGGTTTGAACAGCAACCTGAATGGGTGGTGAC
AAGCCCCCCCTACAAGGGGGCTGTCAAATTTGGGAAGGCGGCTCTATCTG
TAGCCAAACATGGTGTGACGCTCAAACTACCCCTTTCCTTTCTGGAGCCT
TGTGTAGATCGGGCAGACTGGCTGGAGGCAAACCCCCCGACTGTTTGCGT
GTTTTTAAGGAGGGCCAGCTACACGCCTGAGCACATAATGATGGGGGAAT
TTTGGGGGGTATGGTACTGCACGGGTGGTGACCGAACGGCGGTGGGTGGT
ACAAAGCTTGTGTTCCGTGCTTGATGTTGAACACGGTTGGGATGTT back to topCoding sequence (CDS) from alignment at Scaffold_265:73404..74999+ >EsuBft4056_2a-0001 ID=EsuBft4056_2a-0001|Name=EsuBft4056_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=855bp|location=Sequence derived from alignment at Scaffold_265:73404..74999+ (Ectocarpus subulatus male Bft15b)
ATGGAAGGACGGCCCACCAGCAGCACCAGCAAGACGTGCGACGCGTGTCT
TCGAGAAGACGACGAAGCAGGGTATCGGCAGCTGAGGCCAAGGACCATGA
GCATGTTGCGGGCTTTCGTTCGTAATGCTGGACTGGCGGAGAAGTTCCCC
GGCGTGATGCCTCTTGGTGTCGGTATAGATTCCTTGGTTCTATGCAAACG
TGCTGAATGTGTTTTGAAGCAATACGACAAGCATATGTCGGACTTGTGTC
ACGACCGAGCGCGTAAGAAAGAGAAACGCAACCGTAGCGAAGCTGCAACT
TGGACTTCCGCACCTGAGCCCGCAGTGCATCTGAAACGGCGACACTTGGA
CCGCTACTGTACATCGATCGTGGCGGTGGAGGCGTTGCTTGATGCTGTCA
ACGTCAGCGGCAGGGTGTTGGATATGTGTGGGGGGCCGGATGATGCCGTG
GCACGGAGACTTCGAGACACGTGTGAGGTGGTAACGAACGACGTGAGTAG
CAGCCTCGACGCAAGCAAGAGTACTTTCGCGGCGGATTTCCTGGCAGACG
GGTTTGAACAGCAACCTGAATGGGTGGTGACAAGCCCCCCCTACAAGGGG
GCTGTCAAATTTGGGAAGGCGGCTCTATCTGTAGCCAAACATGGTGTGAC
GCTCAAACTACCCCTTTCCTTTCTGGAGCCTTGTGTAGATCGGGCAGACT
GGCTGGAGGCAAACCCCCCGACTGTTTGCGTGTTTTTAAGGAGGGCCAGC
TACACGCCTGAGCACATAATGATGGGGGAATTTTGGGGGGTATGGTACTG
CACGGGTGGTGACCGAACGGCGGTGGGTGGTACAAAGCTTGTGTTCCGTG
CTTGA back to top
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