Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft4053_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 135 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4053_2a-0001 ID=EsuBft4053_2a-0001|Name=EsuBft4053_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1353bp|location=Sequence derived from alignment at Scaffold_441:95802..97322- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGAAACGAAAATCGAGTCCGCGTGGCTTATGGACGGAAAGCGGTCAA
TCGCCAGGAGTACAAAGCTGCTGTTCAAAGCAGCAAAGGAAACTCGGACG
TCGGGTGCATACCTGAGGTGTTCTGCATCGTAGCACACTTCGGGAGAATG
AGGGAGCTGCTGTAGGGGGACTTTCCACTGCCTCCCCTAGGTGCCGCCAC
GCCGCCGCTGTGATGGATGATGTTGGCGTCGATGTTCTTGACGGTACGGA
AATGATCCCGCATTGCAGGAGACAACCGTTGGATATCCTCAACACCACCC
CCGCCCACGGGAGGTGGAGCGGACGTTCCCGCCGCTCCACCTGCCCGTGC
CGCTGCCCCTCTCCCAGCCTCTCGTACCCCCATCGGTGCTCGTCGTCCAC
TACCCCTTCCTCCGCCCCCCCCTGCCCTCCCACCTCCTTGTGTTTCCCGT
CTAGCTCTGCCACTGCCTTGACCTATGCTTGCTGCTCCGACGGCGCCGCC
GCCGCCATAGCCGCAGCTTGAGCTATCGTCCCCCCTGTAACGGCACCTGC
CGTGCCTCCTGCCGCAGCTGTTGATCGAGTTTCAACACAGGGACTAGAAC
TTGCAGTGCCGCCTCGTCCTCGTCTTTGTTCCCCTTGTAACGCCGCCGCC
CCAGCCGCTAGTAGCGGTGCCGGTGGTTGAGGAACAGGTGCGGTAGATGG
TGGTGGGCTTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTGCTGTTACTGTTGCAGCTGGTTCTACTGTCCTTCCTGCTTCCGGCC
CCTCTGCTGCTGCAACTACCTCTGATGCAGCTGCTCCTACGCAACGTTCT
CTACGAGCTTTCCCCTTGCCTTTCCCCTTGGAAGACGGCGACTGGGTTGA
AGCGGTTGCGGAGTTATTTGATGCCCCACGAACGACATGTACTGCCTGGC
TCGTACTGCCTCTTCCGACGTCAGATATCGTCGACGGTGTACTCCTCTCA
CCCGCACATTCCTCGTCGTTCCCCATGTTGTCTTCGTTCGTAGCACCTTC
GCAACTGACTCGCTGACGCTTCCGTGTTGTTGTGTCTGCCCACCCCATGA
CCGTACGGAAAGCTGCTGCCTGCCGTGATTGGTTCTCGTCGTCGCTCTTT
TTCTCTGCGTTTGATTTCGTCCCGGGCTTTTTTGCTCCAGCCGCAGGCGT
TGATCCTTTCCTGCGACCCATGATCCTCTGTGGTGCTGTGCGTGTGCTGT
GGATTGTACGTGTGTGTGCTGCGGTGAGAGAGCTGTGTCCTCCCTCTTTA
CGC back to topprotein sequence of EsuBft4053_2a-0001 >EsuBft4053_2 ID=EsuBft4053_2|Name=EsuBft4053_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=54bp
MRNENRVRVAYGRKAVNRQEYKAAVQSSKGNSDVGCIPEVFCIVAHFGRM
RELL back to topmRNA from alignment at Scaffold_441:95802..97322- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4053_2a-0001 ID=EsuBft4053_2a-0001|Name=EsuBft4053_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1521bp|location=Sequence derived from alignment at Scaffold_441:95802..97322- (Ectocarpus subulatus male Bft15b)
ATGAGAAACGAAAATCGAGTCCGCGTGGCTTATGGACGGAAAGCGGTCAA
TCGCCAGGAGTACAAAGCTGCTGTTCAAAGCAGCAAAGGAAACTCGGACG
TCGGGTGCATACCTGAGGTGTTCTGCATCGTAGCACACTTCGGGAGAATG
AGGGAGCTGCTGTAGGGGGACTTTCCACTGCCTCCCCTAGGTGCCGCCAC
GCCGCCGCTGTGATGGATGATGTTGGCGTCGATGTTCTTGACGGTACGGA
AATGATCCCGCATTGCAGGAGACAACCGTTGGATATCCTCAACACCACCC
CCGCCCACGGGAGGTGGAGCGGACGTTCCCGCCGCTCCACCTGCCCGTGC
CGCTGCCCCTCTCCCAGCCTCTCGTACCCCCATCGGTGCTCGTCGTCCAC
TACCCCTTCCTCCGCCCCCCCCTGCCCTCCCACCTCCTTGTGTTTCCCGT
CTAGCTCTGCCACTGCCTTGACCTATGCTTGCTGCTCCGACGGCGCCGCC
GCCGCCATAGCCGCAGCTTGAGCTATCGTCCCCCCTGTAACGGCACCTGC
CGTGCCTCCTGCCGCAGCTGTTGATCGAGTTTCAACACAGGGACTAGAAC
TTGCAGTGCCGCCTCGTCCTCGTCTTTGTTCCCCTTGTAACGCCGCCGCC
CCAGCCGCTAGTAGCGGTGCCGGTGGTTGAGGAACAGGTGCGGTAGATGG
TGGTGGGCTTGCTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCTGCTGTTACTGTTGCAGCTGGTTCTACTGTCCTTCCTGCTTCCGGCC
CCTCTGCTGCTGCAACTACCTCTGATGCAGCTGCTCCTACGCAACGTTCT
CTACGAGCTTTCCCCTTGCCTTTCCCCTTGGAAGACGGCGACTGGGTTGA
AGCGGTTGCGGAGTTATTTGATGCCCCACGAACGACATGTACTGCCTGGC
TCGTACTGCCTCTTCCGACGTCAGATATCGTCGACGGTGTACTCCTCTCA
CCCGCACATTCCTCGTCGTTCCCCATGTTGTCTTCGTTCGTAGCACCTTC
GCAACTGACTCGCTGACGCTTCCGTGTTGTTGTGTCTGCCCACCCCATGA
CCGTACGGAAAGCTGCTGCCTGCCGTGATTGGTTCTCGTCGTCGCTCTTT
TTCTCTGCGTTTGATTTCGTCCCGGGCTTTTTTGCTCCAGCCGCAGGCGT
TGATCCTTTCCTGCGACCCATGGTAAATCCTCTGTGGTGCTGTGCGTGTG
CTGTGGGTTGTACGTGTGTGTGCTGCGGTGAGAGAGCTGTGTCCTTTCTC
TCTGNCCGCTCTTTTTCTCTGCATATGACTTCGTCCCGGGCTTTTTTGCT
CCAGCCGCAGGCGTTGATCCTTTCCAGCGACCCATGGTAGATCCTCTGTG
GTGCTGTGCGTGTGCTGTGGATTGTACGTGTGTGTGCTGCGGTGAGAGAG
CTGTGTCCTCCCTCTTTACGC back to topCoding sequence (CDS) from alignment at Scaffold_441:95802..97322- >EsuBft4053_2a-0001 ID=EsuBft4053_2a-0001|Name=EsuBft4053_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=165bp|location=Sequence derived from alignment at Scaffold_441:95802..97322- (Ectocarpus subulatus male Bft15b)
ATGAGAAACGAAAATCGAGTCCGCGTGGCTTATGGACGGAAAGCGGTCAA
TCGCCAGGAGTACAAAGCTGCTGTTCAAAGCAGCAAAGGAAACTCGGACG
TCGGGTGCATACCTGAGGTGTTCTGCATCGTAGCACACTTCGGGAGAATG
AGGGAGCTGCTGTAG back to top
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