Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FIA9 |
| ProteomeId | EsuBft3934_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 2759|Eukaryota |
| Length | 183 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.69e-114 |
| EggNOG OGs | 2D5KK@1|root,2SYVY@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3934_2a-0001 ID=EsuBft3934_2a-0001|Name=EsuBft3934_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1839bp|location=Sequence derived from alignment at Scaffold_106:75053..77217+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGATGCTGCAGATGACGATGTGGCGGAGGGGAACGCAACGGTGAGCGA
TGGCCTTTGGTGGTGCGGCCGCTGCTATCAGAAACGGTTGGACGGCATAA
AGAGAGACGAGAAACAGCCAGAGCACACAGCGAACAATACGCATGGATCG
GGGGGTGAGGCGCCGGTGCCTCCAGATCCGTTGGACACGGTGCGCGCTAT
GGTGGAAGATGTCGTCCGTCGAGGTGAGATCCTGTACTGGCAGGACGTCG
CCGCGTGGAGAGCACTCGGCACGAAACTCAAGGGCGCGACGAAGAAAAAT
GTTTTCTCCATCCCGGCTAGGAACAGCATCAACAAGGCCACGAAGAGTCA
AGGGAGGTCGTCTGCACTCAAGGATTCCGTCGGTAATGCCTACGCTGGGG
GGCAAGAGTGGAAGGCCCTCACGCTGAACATGATCGATGCGGCCAGAGAA
GGTGGGGGTGTGGTGACGCAAGACCAGATGCTGGAAATGGTAGCTTCCGT
AGGAGCGGCCACGCCGTACAGCATGGCCAACGCGACAGGAGGTGAGGAAG
AGAGCGTGCGCAATACAGGAGCTAAGCACGCCAACAAGGCGGCAGGTCCA
GGGAAATGGGTCAGAGAGCACTGTGCCGACGGGTTCGCAGACGACCCGTT
TTACGACGCCGACGCTCATGGCGTGGATCTTCCCGTGTCAATCCACCAAG
GGGTGCACCCGGAATATCTCGAGAAGGGAACTGCGGGAGTAATCGACTAC
TTCAAGAGGCAGCTGTTGTCGAAGTGGCTGCAGCCAACCGAGCTACTCAT
GGTGTGCTACGACCGACAGGAACTGGTCCCGGTAATCAAAGGACAAGAGC
AGCTTGGGAGGACCGAGAAACTTGGTGAGTGCTCTCGGACCTTCGACCCG
AAGTCAACGGACCCTGTTCCTTCGTTACAGTATGGACCATGGCTTCGAGC
CGATGGCAAGGCGGCGCGGGACGGAATCGCCGCCAACCTCGCCATGCGCG
TGCTAGCTGATGAAGTCTGGACCGGCGACACCAAGCCGAACGGAATCGTC
GCATTCTATGGCGTCGGAGGTGAGCCTGGTCTGAGAGCTGATCATCCATC
TGGTGTAACTCGGAGGCGCTTTCCGGAACCGTACCACTCCTTCACTTTCG
AAACGGAAANGGCGCGGGACGGAATCGCCGCCAACCTCGCCATGCGCGTG
CTAGCTGATGAAGTCTGGACCGGCGACACCAAGCCGAACGGAATCGTCGC
ATTCTATGGCGTCGGAGGTGAGCCTGGTCTGAGAGCTGATCATCCAGCTG
GTGTAGATGCGGAGGGCGTAGGCCTTGAGATGGGAGGGGTAGGTGCCACG
GAGGCGCTTTCCGGAACCGAACCACTCCTTCACTTTCGAAACGGAAACGA
TCCGGTACTCGGCGTCGAGCGGCAGCGAGGGCCAGACATCGGCGAGGCGG
AGCTCTCCGTGATACACTTCATCGTTTGGGCGAAGAGGTACTGGGGGAAA
AACTTCCACAAGTGGATCGTTTCATCGGTAGACACGGACCTATGGATGAT
CATTCTACTGGCGATGACCACTGGTTGGCTCCGGCCTCGTGGCGAGGGGG
CGGTTGACGTGACCGTCCAGAAGGTCGTGGGTGGCGAGACCAAGTTCCTG
TGGATGAACAGAGTGTTCGCCAGCATCTGCGAGCTCCAGGACGGAAGCGA
GTCCGCGTGGCCGCCATTGACCTTCAGGGGATGGATTCCCACGGACAATG
ACAAGGTCCGTCTGTTCGTCCTAACGTTCCTGGAGTCGGGCTATGTGGGT
ACTGGCCCTCAAGAGCGTGCGGACGGAGGGATTGTTTGA back to topprotein sequence of EsuBft3934_2a-0001 >EsuBft3934_2 ID=EsuBft3934_2|Name=EsuBft3934_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=612bp
MDAADDDVAEGNATVSDGLWWCGRCYQKRLDGIKRDEKQPEHTANNTHGS
GGEAPVPPDPLDTVRAMVEDVVRRGEILYWQDVAAWRALGTKLKGATKKN
VFSIPARNSINKATKSQGRSSALKDSVGNAYAGGQEWKALTLNMIDAARE
GGGVVTQDQMLEMVASVGAATPYSMANATGGEEESVRNTGAKHANKAAGP
GKWVREHCADGFADDPFYDADAHGVDLPVSIHQGVHPEYLEKGTAGVIDY
FKRQLLSKWLQPTELLMVCYDRQELVPVIKGQEQLGRTEKLGECSRTFDP
KSTDPVPSLQYGPWLRADGKAARDGIAANLAMRVLADEVWTGDTKPNGIV
AFYGVGGEPGLRADHPSGVTRRRFPEPYHSFTFETEXARDGIAANLAMRV
LADEVWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGAT
EALSGTEPLLHFRNGNDPVLGVERQRGPDIGEAELSVIHFIVWAKRYWGK
NFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVVGGETKFL
WMNRVFASICELQDGSESAWPPLTFRGWIPTDNDKVRLFVLTFLESGYVG
TGPQERADGGIV back to topmRNA from alignment at Scaffold_106:75053..77217+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3934_2a-0001 ID=EsuBft3934_2a-0001|Name=EsuBft3934_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2165bp|location=Sequence derived from alignment at Scaffold_106:75053..77217+ (Ectocarpus subulatus male Bft15b)
ATGGATGCTGCAGATGACGATGTGGCGGAGGGGAACGCAACGGTGAGCGA
TGGCCTTTGGTGGTGCGGCCGCTGCTATCAGAAACGGTTGGACGGCATAA
AGAGAGACGAGAAACAGCCAGAGCACACAGCGAACAATACGCATGGATCG
GGGGGTGAGGCGCCGGTGCCTCCAGATCCGTTGGACACGGTGCGCGCTAT
GGTGGAAGATGTCGTCCGTCGAGGTGAGATCCTGTACTGGCAGGACGTCG
CCGCGTGGGTAACAGCGGAACGCGCGAAGCTTGGCATGGAAGAGTTACAA
GGGAGATACCCAAGAAAAATCGTCCGGGACATATTTGCAAATGGGTCAGA
GAGCACTCGGCACGAAACTCAAGGGCGCGACGAAGAAAAATGTTTTCTCC
ATCCCGGCTAGGAACAGCATCAACAAGGCCACGAAGAGTCAAGGGAGGTC
GTCTGCACTCAAGGATTCCGTCGGTAATGCCTACGCTGGGGGGCAAGAGT
GGAAGGCCCTCACGCTGAACATGATCGATGCGGCCAGAGAAGGTGGGGGT
GTGGTGACGCAAGACCAGATGCTGGAAATGGTAGCTTCCGTAGGAGCGGC
CACGCCGTACAGCATGGCCAACGCGACAGGAGGTGAGGAAGAGAGCGTGC
GCAATACAGGTTGTCATCTCGTGCTCTCGCTCCCAGCCGAAGCTCACCCA
CTCTCCACACCCGTGTTTCTGAGTGCTATTATCATAATGCATACCGCATC
ACATTGTGTTCACCCCCCCATCCCCAAACACCCCTGTTGGTAATCTCTCC
CCAAACGTATCAGGAGCTAAGCACGCCAACAAGGCGGCAGGTCCAGGGAA
ATGGGTCAGAGAGCACTGTGCCGACGGGTTCGCAGACGACCCGTTTTACG
ACGCCGACGCTCATGGCGTGGATCTTCCCGTGTCAATCCACCAAGGGGTG
CACCCGGAATATCTCGAGAAGGGAACTGCGGGAGTAATCGACTACTTCAA
GAGGCAGCTGTTGTCGAAGTGGCTGCAGCCAACCGAGCTACTCATGGTGT
GCTACGACCGACAGGAACTGGTCCCGGTAATCAAAGGACAAGAGCAGCTT
GGGAGGACCGAGAAACTTGGTGAGTGCTCTCGGACCTTCGACCCGAAGTC
AACGGACCCTGTTCCTTCGTTACAGTATGGACCATGGCTTCGAGCCGATG
GCAAGGCGGCGCGGGACGGAATCGCCGCCAACCTCGCCATGCGCGTGCTA
GCTGATGAAGTCTGGACCGGCGACACCAAGCCGAACGGAATCGTCGCATT
CTATGGCGTCGGAGGTGAGCCTGGTCTGAGAGCTGATCATCCATCTGGTG
TAGATGCGGAGGGCGTAGGCCTTGAGATGGGAGGGGTAGGTAACTCGGAG
GCGCTTTCCGGAACCGTACCACTCCTTCACTTTCGAAACGGAAANGGCGC
GGGACGGAATCGCCGCCAACCTCGCCATGCGCGTGCTAGCTGATGAAGTC
TGGACCGGCGACACCAAGCCGAACGGAATCGTCGCATTCTATGGCGTCGG
AGGTGAGCCTGGTCTGAGAGCTGATCATCCAGCTGGTGTAGATGCGGAGG
GCGTAGGCCTTGAGATGGGAGGGGTAGGTGCCACGGAGGCGCTTTCCGGA
ACCGAACCACTCCTTCACTTTCGAAACGGAAACGATCCGGTACTCGGCGT
CGAGCGGCAGCGAGGGCCAGACATCGGCGAGGCGGAGCTCTCCGTGATAC
ACTTCATCGTTTGGGCGAAGAGGTACTGGGGGAAAAACTTCCACAAGTGG
ATCGTTTCATCGGTAGACACGGACCTATGGATGATCATTCTACTGGCGAT
GACCACTGGTTGGCTCCGGCCTCGTGGCGAGGGGGCGGTTGACGTGACCG
TCCAGAAGGTCGTGGGTGGCGAGACCAAGTTCCTGTGGATGAACAGAGTG
TTCGCCAGCATCTGCGAGCTCCAGGACGGAAGCGAGTCCGCGTGGCCGCC
ATTGACCTTCAGGGGATGGATTCCCACGGACAATGACAAGGTCCGTCTGT
TCGTCCTAACGTTCCTGGAGTCGGGCTGTGACTACCTCCCGGCAATTTCC
GGGCTGCCGTTCGACAAGATGTGGGTACTGGCCCTCAAGAGCGTGCGGAC
GGAGGGATTGTTTGA back to topCoding sequence (CDS) from alignment at Scaffold_106:75053..77217+ >EsuBft3934_2a-0001 ID=EsuBft3934_2a-0001|Name=EsuBft3934_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1839bp|location=Sequence derived from alignment at Scaffold_106:75053..77217+ (Ectocarpus subulatus male Bft15b)
ATGGATGCTGCAGATGACGATGTGGCGGAGGGGAACGCAACGGTGAGCGA
TGGCCTTTGGTGGTGCGGCCGCTGCTATCAGAAACGGTTGGACGGCATAA
AGAGAGACGAGAAACAGCCAGAGCACACAGCGAACAATACGCATGGATCG
GGGGGTGAGGCGCCGGTGCCTCCAGATCCGTTGGACACGGTGCGCGCTAT
GGTGGAAGATGTCGTCCGTCGAGGTGAGATCCTGTACTGGCAGGACGTCG
CCGCGTGGAGAGCACTCGGCACGAAACTCAAGGGCGCGACGAAGAAAAAT
GTTTTCTCCATCCCGGCTAGGAACAGCATCAACAAGGCCACGAAGAGTCA
AGGGAGGTCGTCTGCACTCAAGGATTCCGTCGGTAATGCCTACGCTGGGG
GGCAAGAGTGGAAGGCCCTCACGCTGAACATGATCGATGCGGCCAGAGAA
GGTGGGGGTGTGGTGACGCAAGACCAGATGCTGGAAATGGTAGCTTCCGT
AGGAGCGGCCACGCCGTACAGCATGGCCAACGCGACAGGAGGTGAGGAAG
AGAGCGTGCGCAATACAGGAGCTAAGCACGCCAACAAGGCGGCAGGTCCA
GGGAAATGGGTCAGAGAGCACTGTGCCGACGGGTTCGCAGACGACCCGTT
TTACGACGCCGACGCTCATGGCGTGGATCTTCCCGTGTCAATCCACCAAG
GGGTGCACCCGGAATATCTCGAGAAGGGAACTGCGGGAGTAATCGACTAC
TTCAAGAGGCAGCTGTTGTCGAAGTGGCTGCAGCCAACCGAGCTACTCAT
GGTGTGCTACGACCGACAGGAACTGGTCCCGGTAATCAAAGGACAAGAGC
AGCTTGGGAGGACCGAGAAACTTGGTGAGTGCTCTCGGACCTTCGACCCG
AAGTCAACGGACCCTGTTCCTTCGTTACAGTATGGACCATGGCTTCGAGC
CGATGGCAAGGCGGCGCGGGACGGAATCGCCGCCAACCTCGCCATGCGCG
TGCTAGCTGATGAAGTCTGGACCGGCGACACCAAGCCGAACGGAATCGTC
GCATTCTATGGCGTCGGAGGTGAGCCTGGTCTGAGAGCTGATCATCCATC
TGGTGTAACTCGGAGGCGCTTTCCGGAACCGTACCACTCCTTCACTTTCG
AAACGGAAANGGCGCGGGACGGAATCGCCGCCAACCTCGCCATGCGCGTG
CTAGCTGATGAAGTCTGGACCGGCGACACCAAGCCGAACGGAATCGTCGC
ATTCTATGGCGTCGGAGGTGAGCCTGGTCTGAGAGCTGATCATCCAGCTG
GTGTAGATGCGGAGGGCGTAGGCCTTGAGATGGGAGGGGTAGGTGCCACG
GAGGCGCTTTCCGGAACCGAACCACTCCTTCACTTTCGAAACGGAAACGA
TCCGGTACTCGGCGTCGAGCGGCAGCGAGGGCCAGACATCGGCGAGGCGG
AGCTCTCCGTGATACACTTCATCGTTTGGGCGAAGAGGTACTGGGGGAAA
AACTTCCACAAGTGGATCGTTTCATCGGTAGACACGGACCTATGGATGAT
CATTCTACTGGCGATGACCACTGGTTGGCTCCGGCCTCGTGGCGAGGGGG
CGGTTGACGTGACCGTCCAGAAGGTCGTGGGTGGCGAGACCAAGTTCCTG
TGGATGAACAGAGTGTTCGCCAGCATCTGCGAGCTCCAGGACGGAAGCGA
GTCCGCGTGGCCGCCATTGACCTTCAGGGGATGGATTCCCACGGACAATG
ACAAGGTCCGTCTGTTCGTCCTAACGTTCCTGGAGTCGGGCTATGTGGGT
ACTGGCCCTCAAGAGCGTGCGGACGGAGGGATTGTTTGA back to top
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