Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 159749.K0T4Q0 |
| ProteomeId | EsuBft3762_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 244 |
| Evalue | 5.66e-07 |
| EggNOG OGs | 2D06V@1|root,2SD1E@2759|Eukaryota |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3762_2a-0001 ID=EsuBft3762_2a-0001|Name=EsuBft3762_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2445bp|location=Sequence derived from alignment at Scaffold_392:345500..347944+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCACGTGGAAAAGGTTCTGCAAGCCTTGCCTGACTTTAAGAATGAGAG
GACAGCCCTGCAGCACCTGGTAGAGAGTAGGGGACACATTCTTTTGTTGT
CTCCGAAGTGTCACCCGGAGGTAGCGGGGGTAGGGATCCAGTACTCGTGG
GGGTTTTCCAAGCAGAAGTTTCGGCGGAAGATCAATGATGAGGTCCCGAA
GCACTTGCACGACAACATCGAAAAGTCGCTGTGCATAGACAAGTACTTGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGAGAAGCGGGTGTTGTGTGAGCTGTGTGTTGTCGTT
GTAGATTGTAGTCGGTGGCATGTACTTGTACATTGGATTTTTTTTCTGCG
AGATAAACGGGTGTGGTGGGGGTGTGTGTTAAATGAGTCGGTTTCAAGCT
GTAGTTTGCATCATTTTTTTCTGTAAGATTAACCGGTGCGAGAAGTTGTG
TGTGTGTGTTGATGAGTCTGTCAGTTTGAATGTTGTTTTTAGATAAGCGG
GTGTTTTTTAACCGCTGTCAATCAACGAACGAAGTGTTTTTTTTTATGTA
CAAAGAAACGTCAACTTTTGTGCGATTTGTGCAAAACATTTGTCATGCGT
TTTTGGAGCGCTTACCTTCAGATTACAACCTCTTGCATGTATGTGTGTCA
CGTCATTACGATCGATAAGCACCCACACCTACCTGTCCAACCAAAGGGGT
ACAGTCAGCATCTGTGCGCCTCTTGCCATCAGGCCGCTTTCGCGCCCCTT
TTCTCGGGCTGTAAGGCCTTCATTTTCCTACACAATTTCCGCCCCTGCAC
CCAGGTATCGAGGTCATGACGCAATTTGCTATTTCCGAGCCGGTTTTTAC
GAATTGGAACCTGAAATTTTGATATGTGATTAGGATTGGTCTTACAAATG
CCCCCGAGTGAGATGCCGTTTTTATTTTTTTACCCACAAAAACCCCTATG
CTAGGATTCTCAGTTATTGAATATAGGGATACCTCGCCAAAAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTCCTCCTCCTCCTCCTCCACCCGCAGATCGCCGAACAAACC
ACCCGGTTCTTGGTCATCATGCTCACCATCGGAGTCGAACGTGTGCATTA
TGTTCTGCAAACTCGATGCTGCGGCAGCAGCCCCGGCCATTATGGACTCC
TCATCCATGTTGGGCGTGGCCTTCTCGTCGGCGCGGCCTTCTCGTGAGTG
TGTGTGTAGATGTGTTCGTGTGTTCTTGTGTTGTTGGGGGTGTGTGTGTG
CGTTGGCGGCGAATGTGCCGAAAACGCGGCGCTACTTGCCTTTTCCGCCG
CCCAAACATTTTCGCGACCTGCCCCATTTCAAAATGTTTGTCAAACATTT
TGTCAACCGAGCGACTTTTGCCCCATTTCGAAATCTTTAGAATATTTTGC
CGAAGATTTTCTCCCATAAAAAGTGAAACAAAATCTTTATCCGCAAATGT
TTGAAAATTTAGACATTTTTTCAAAGATTTGGTGACCATAAACAT back to topprotein sequence of EsuBft3762_2a-0001 >EsuBft3762_2 ID=EsuBft3762_2|Name=EsuBft3762_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=150bp
MHVEKVLQALPDFKNERTALQHLVESRGHILLLSPKCHPEVAGVGIQYSW
GFSKQKFRRKINDEVPKHLHDNIEKSLCIDKYLTXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX back to topmRNA from alignment at Scaffold_392:345500..347944+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3762_2a-0001 ID=EsuBft3762_2a-0001|Name=EsuBft3762_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2445bp|location=Sequence derived from alignment at Scaffold_392:345500..347944+ (Ectocarpus subulatus male Bft15b)
ATGCACGTGGAAAAGGTTCTGCAAGCCTTGCCTGACTTTAAGAATGAGAG
GACAGCCCTGCAGCACCTGGTAGAGAGTAGGGGACACATTCTTTTGTTGT
CTCCGAAGTGTCACCCGGAGGTAGCGGGGGTAGGGATCCAGTACTCGTGG
GGGTTTTCCAAGCAGAAGTTTCGGCGGAAGATCAATGATGAGGTCCCGAA
GCACTTGCACGACAACATCGAAAAGTCGCTGTGCATAGACAAGTACTTGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGAGAAGCGGGTGTTGTGTGAGCTGTGTGTTGTCGTT
GTAGATTGTAGTCGGTGGCATGTACTTGTACATTGGATTTTTTTTCTGCG
AGATAAACGGGTGTGGTGGGGGTGTGTGTTAAATGAGTCGGTTTCAAGCT
GTAGTTTGCATCATTTTTTTCTGTAAGATTAACCGGTGCGAGAAGTTGTG
TGTGTGTGTTGATGAGTCTGTCAGTTTGAATGTTGTTTTTAGATAAGCGG
GTGTTTTTTAACCGCTGTCAATCAACGAACGAAGTGTTTTTTTTTATGTA
CAAAGAAACGTCAACTTTTGTGCGATTTGTGCAAAACATTTGTCATGCGT
TTTTGGAGCGCTTACCTTCAGATTACAACCTCTTGCATGTATGTGTGTCA
CGTCATTACGATCGATAAGCACCCACACCTACCTGTCCAACCAAAGGGGT
ACAGTCAGCATCTGTGCGCCTCTTGCCATCAGGCCGCTTTCGCGCCCCTT
TTCTCGGGCTGTAAGGCCTTCATTTTCCTACACAATTTCCGCCCCTGCAC
CCAGGTATCGAGGTCATGACGCAATTTGCTATTTCCGAGCCGGTTTTTAC
GAATTGGAACCTGAAATTTTGATATGTGATTAGGATTGGTCTTACAAATG
CCCCCGAGTGAGATGCCGTTTTTATTTTTTTACCCACAAAAACCCCTATG
CTAGGATTCTCAGTTATTGAATATAGGGATACCTCGCCAAAAAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTCCTCCTCCTCCTCCTCCACCCGCAGATCGCCGAACAAACC
ACCCGGTTCTTGGTCATCATGCTCACCATCGGAGTCGAACGTGTGCATTA
TGTTCTGCAAACTCGATGCTGCGGCAGCAGCCCCGGCCATTATGGACTCC
TCATCCATGTTGGGCGTGGCCTTCTCGTCGGCGCGGCCTTCTCGTGAGTG
TGTGTGTAGATGTGTTCGTGTGTTCTTGTGTTGTTGGGGGTGTGTGTGTG
CGTTGGCGGCGAATGTGCCGAAAACGCGGCGCTACTTGCCTTTTCCGCCG
CCCAAACATTTTCGCGACCTGCCCCATTTCAAAATGTTTGTCAAACATTT
TGTCAACCGAGCGACTTTTGCCCCATTTCGAAATCTTTAGAATATTTTGC
CGAAGATTTTCTCCCATAAAAAGTGAAACAAAATCTTTATCCGCAAATGT
TTGAAAATTTAGACATTTTTTCAAAGATTTGGTGACCATAAACAT back to topCoding sequence (CDS) from alignment at Scaffold_392:345500..347944+ >EsuBft3762_2a-0001 ID=EsuBft3762_2a-0001|Name=EsuBft3762_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=450bp|location=Sequence derived from alignment at Scaffold_392:345500..347944+ (Ectocarpus subulatus male Bft15b)
ATGCACGTGGAAAAGGTTCTGCAAGCCTTGCCTGACTTTAAGAATGAGAG
GACAGCCCTGCAGCACCTGGTAGAGAGTAGGGGACACATTCTTTTGTTGT
CTCCGAAGTGTCACCCGGAGGTAGCGGGGGTAGGGATCCAGTACTCGTGG
GGGTTTTCCAAGCAGAAGTTTCGGCGGAAGATCAATGATGAGGTCCCGAA
GCACTTGCACGACAACATCGAAAAGTCGCTGTGCATAGACAAGTACTTGA
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN back to top
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