Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3747_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 38 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3747_3a-0001 ID=EsuBft3747_3a-0001|Name=EsuBft3747_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=382bp|location=Sequence derived from alignment at Scaffold_54:128826..129207+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTTGTTGTCCATCCCAGTCGGTTCCTCGCTTTCTCCCTCGTTGCACTTAG
GGTTCTTGGTCTGAAGATTCTCGCGCCGAAGGGTCAACCAGCCCAATCAG
CTCGTCACCACCTGTCCCCTCCTCATTTGATGGCAAAACCAGGTTACTGA
GACAGTACAGCTCCCTCCAGCAAACCTAGGGCCGTGTACATAGTGCCCGT
CTACCTTTCTGATGACGTCTGCCTCCGCGCACAAAGATGAGATAGGCATT
ACTGCCTACACCGACGGCCTGGAGGCCCGCGCATCTGCACCTTTGTACCT
GGCGCACCAGTGCCGATCCAACTCCACCACTACGCACGCCTCGCGGCGGG
TGCGCCGCAGCATGAAGGTATCGGTCCCCTGA back to topprotein sequence of EsuBft3747_3a-0001 >EsuBft3747_3 ID=EsuBft3747_3|Name=EsuBft3747_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=56bp
MTSASAHKDEIGITAYTDGLEARASAPLYLAHQCRSNSTTTHASRRVRRS
MKVSVP back to topmRNA from alignment at Scaffold_54:128826..129207+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3747_3a-0001 ID=EsuBft3747_3a-0001|Name=EsuBft3747_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=382bp|location=Sequence derived from alignment at Scaffold_54:128826..129207+ (Ectocarpus subulatus male Bft15b)
GTTGTTGTCCATCCCAGTCGGTTCCTCGCTTTCTCCCTCGTTGCACTTAG
GGTTCTTGGTCTGAAGATTCTCGCGCCGAAGGGTCAACCAGCCCAATCAG
CTCGTCACCACCTGTCCCCTCCTCATTTGATGGCAAAACCAGGTTACTGA
GACAGTACAGCTCCCTCCAGCAAACCTAGGGCCGTGTACATAGTGCCCGT
CTACCTTTCTGATGACGTCTGCCTCCGCGCACAAAGATGAGATAGGCATT
ACTGCCTACACCGACGGCCTGGAGGCCCGCGCATCTGCACCTTTGTACCT
GGCGCACCAGTGCCGATCCAACTCCACCACTACGCACGCCTCGCGGCGGG
TGCGCCGCAGCATGAAGGTATCGGTCCCCTGA back to topCoding sequence (CDS) from alignment at Scaffold_54:128826..129207+ >EsuBft3747_3a-0001 ID=EsuBft3747_3a-0001|Name=EsuBft3747_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=171bp|location=Sequence derived from alignment at Scaffold_54:128826..129207+ (Ectocarpus subulatus male Bft15b)
ATGACGTCTGCCTCCGCGCACAAAGATGAGATAGGCATTACTGCCTACAC
CGACGGCCTGGAGGCCCGCGCATCTGCACCTTTGTACCTGGCGCACCAGT
GCCGATCCAACTCCACCACTACGCACGCCTCGCGGCGGGTGCGCCGCAGC
ATGAAGGTATCGGTCCCCTGA back to top
|