Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G529 |
| ProteomeId | EsuBft3745_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 2759|Eukaryota |
| Length | 33 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.89e-13 |
| EggNOG OGs | 2AWDH@1|root,2RZYI@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | DDE superfamily endonuclease |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3745_2a-0001 ID=EsuBft3745_2a-0001|Name=EsuBft3745_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=333bp|location=Sequence derived from alignment at Scaffold_265:177977..178309- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACCCTCCTAGAGTTGATTTCTGGCGTAGCTGGGGAAGAGGATCTGTG
CATGCTGGTGTGTGTCTGCTGCTTGTACGAGTGGCGTCGGTATCACGAGC
TACATGCCCCGACCACGCTTGAAGGCGTGTTCCCGAACCTCAACTTCTTC
GAAGCTATCGGGGGCTTTGACTTCAAGGAGGTATTTCGCTTCGAGAAACC
GCATTTATTTCTTGCAGCTTCTACGAAGGCTGGAGCTTCCGGACAGCTTC
GAAGTTTCGAGTTGAGCATGTGGCACGAAGAGTCGCAACACAGCACAAAT
GGTCGCCATGTCCTTAGGGAAGGGCGGGGTTAG back to topprotein sequence of EsuBft3745_2a-0001 >EsuBft3745_2 ID=EsuBft3745_2|Name=EsuBft3745_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=110bp
MTLLELISGVAGEEDLCMLVCVCCLYEWRRYHELHAPTTLEGVFPNLNFF
EAIGGFDFKEVFRFEKPHLFLAASTKAGASGQLRSFELSMWHEESQHSTN
GRHVLREGRG back to topmRNA from alignment at Scaffold_265:177977..178309- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3745_2a-0001 ID=EsuBft3745_2a-0001|Name=EsuBft3745_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=333bp|location=Sequence derived from alignment at Scaffold_265:177977..178309- (Ectocarpus subulatus male Bft15b)
ATGACCCTCCTAGAGTTGATTTCTGGCGTAGCTGGGGAAGAGGATCTGTG
CATGCTGGTGTGTGTCTGCTGCTTGTACGAGTGGCGTCGGTATCACGAGC
TACATGCCCCGACCACGCTTGAAGGCGTGTTCCCGAACCTCAACTTCTTC
GAAGCTATCGGGGGCTTTGACTTCAAGGAGGTATTTCGCTTCGAGAAACC
GCATTTATTTCTTGCAGCTTCTACGAAGGCTGGAGCTTCCGGACAGCTTC
GAAGTTTCGAGTTGAGCATGTGGCACGAAGAGTCGCAACACAGCACAAAT
GGTCGCCATGTCCTTAGGGAAGGGCGGGGTTAG back to topCoding sequence (CDS) from alignment at Scaffold_265:177977..178309- >EsuBft3745_2a-0001 ID=EsuBft3745_2a-0001|Name=EsuBft3745_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=333bp|location=Sequence derived from alignment at Scaffold_265:177977..178309- (Ectocarpus subulatus male Bft15b)
ATGACCCTCCTAGAGTTGATTTCTGGCGTAGCTGGGGAAGAGGATCTGTG
CATGCTGGTGTGTGTCTGCTGCTTGTACGAGTGGCGTCGGTATCACGAGC
TACATGCCCCGACCACGCTTGAAGGCGTGTTCCCGAACCTCAACTTCTTC
GAAGCTATCGGGGGCTTTGACTTCAAGGAGGTATTTCGCTTCGAGAAACC
GCATTTATTTCTTGCAGCTTCTACGAAGGCTGGAGCTTCCGGACAGCTTC
GAAGTTTCGAGTTGAGCATGTGGCACGAAGAGTCGCAACACAGCACAAAT
GGTCGCCATGTCCTTAGGGAAGGGCGGGGTTAG back to top
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