Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3634_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 221 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3634_3a-0001 ID=EsuBft3634_3a-0001|Name=EsuBft3634_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2210bp|location=Sequence derived from alignment at Scaffold_457:46031..49610- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GAGGAGAGAGCAGCAGTAGGCCGGGCGTGGAAGGCGCCCTGGTGCGGGAT
GTGGAGGTCCCTGCTGCAGGTGGGTTTGGTGCATTCCAAGACACCAACTC
TCTTCGTAGTACGTTCGGCAGTGCTTGCGTACAGCAGTCTGCTGCCGCTG
GAGACACTGGTGAGAGTGTCACAGCAACCGATCAATCCATTCAGGGGAGG
TCGGGCGGAGAATGCGGCACGGCGGAAGGGTCGTGCCCACTGTTCTGCCT
TGCTGTAGTAGCGGGCGGGGCGCACAGAAGTCGCCGGAATTCATGGTGCA
ACAGAACGGACGGAGGGGCCGTGAAGTCGCGCAGTTTTGGCGCGCACTCC
ATCTGCGGCGGTGGAGCATCAGGACGGTAGAGAGACCGTTGGGCAGGATT
GCCGGAGACACTCAACCATGGATCGACCGCGCGACGGCGCGGGGGGGGGT
GGGCGCCGTACATGCTTGATGCTGGCGGTGTTTTGTTAAGTCGATCCAAG
GCCGGCAGTAGAGGCCGGGTACGCCCTACCACGGTTGACACGCGCGACGG
CGCGTCGGGGGGTGGGCGCCGATCACGCGGGAGCGGGCGGCGTTTTTTGA
CCACAGCACGGACGGAGGGGCCCCGTGGCTGTTCTGCCTCGTCATAGGAG
CGAGGGGAGTAGCATATTAAGTCGCGCGGAGGTGGCGCGCAACCATCAGC
CGGAGGTGGGTGGTGGAACGGGGCACAGCTAAGTGGGTGTCATCAAAGTC
GCGTGGGGAGGTGCCGCGCGCATTTCATCAGTCGGGAACGAGCGGTGGAG
ACAAGAATGCGTCAGGATGGACGTGAGGAATTAAAGGCGTGCTTCGCCAT
CAAGATGTGTTGGTGGAGTAGTTGGAATAAGCTTGGATTTTGTTGTCTTG
TTTTGTGTGGAGGTACTAGTTTGAGGTCGTGATGAAATCAAGCAACTTGT
ATTCGAGGAAATTCTGTTCACTGTTGCGTGTTTCTTTCCGCCGTCATTTG
CGCGTTGTCTTGCACCCAAATCGTGGTTGTTCTGAATGTTTGTGTTCGTC
GTTATGCCATTAGTGCATCCTTCGCCGGTGACGTTGTGTTGCTGGTGATG
ATGGCAAAGTGTCGGGGGGTAGAGACGTTCACGTTGGTAGAATTTGCCAC
CATCACTCATGTGTGGGGGCTACGCGGTTATATGTGACCCACGGCCTAAG
TAGGAGGCGCAACAAGTGTATTGTTTACCTGAAATGTTGAAGAACAAGGG
AGGGTGGAAACGGGCGTGTTTCTTTTGAGAATGTTACGCTTGAAGAGTAC
GCCCGGTCTTGGTATTATGCAACTTGACAGGTTGGTGTGTCGGGCAGGTA
TGCATTTGTTGGTGGAAGTCGATTTTGTTTTCACGTACGGAAGCATGTTG
GTTGTGTCTGTTTTGGGAAGCGACATCTAGGTGATGGCCATGTGCGTGTT
CCTCTGGGCGCCGGTGTTGCGCAAGGGAGGGCACTAGGCTTAGGTTCCTG
GTGTGCTTGTCTATAATGCAGACAGCGTAGATGCTTGGGGTTCGTAGTAC
AGCGTTACCAAGTTGTGGGGGGGCGTTTGTGTTTTGCGTAGTTGTGCTTG
AAGGTTCAGTAGCAAGTTGATGTATCCTTGATTGAAGGAGAACTGAGGAT
TGATTTGGTAGTTTGCAGATGGTGGACCTTGTTTGAAGCAGGCTACATTC
GGCAGGTTCTGTATTTCTCAAAAGCGGGCATCCTTTGGAGAATCGAGTTT
GATTGGTTTTTCAGTTGGAAACAGGTCATGATTTTGAGTTCGTGTAGGAT
TGCAGATGGTTGAACCGAAGGCAGGGAGAACGTACCTGTTCGATGCAGTT
TTCGTGTGGAATGCAGATAGACAGGGAGGGCGTTGCCTGTATGTGTGTGA
CACCTGAAGAGTCAGTTGGTGCTGCACAGCAAGGAGTTCGTTCCATCATG
TCGGAAGGATTTGTCAGAGGCGTTGCTCGAGGTAGTAGAGCGTTGCCTAG
AATTTGTAATCCGAGCGTCTGGAGTGGTTTTATCTTTGTCTTCTTGCAGT
ACGGCCGTTGGAATCATTGGTGATATGGACGGCTATTGGATTTTGTTTGA
GCCGTTGGAATCTTTCGTGATATGATCGGCGTGAGGCGTTGAATTTCTGA
GGGGTTTTGATCCGGTGGCCGGGTCTTCCCTTTACTTTTGGTTTGTCTCG
AAAAGTAGCC back to topprotein sequence of EsuBft3634_3a-0001 >EsuBft3634_3 ID=EsuBft3634_3|Name=EsuBft3634_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=69bp
MWRSLLQVGLVHSKTPTLFVVRSAVLAYSSLLPLETLVRVSQQPINPFRG
GRAENAARRKGRAHCSALL back to topmRNA from alignment at Scaffold_457:46031..49610- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3634_3a-0001 ID=EsuBft3634_3a-0001|Name=EsuBft3634_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3580bp|location=Sequence derived from alignment at Scaffold_457:46031..49610- (Ectocarpus subulatus male Bft15b)
GAGGAGAGAGCAGCAGTAGGCCGGGCGTGGAAGGCGCCCTGGTGCGGGAT
GTGGAGGTCCCTGCTGCAGGTGGGTTTGGTGCATTCCAAGACACCAACTC
TCTTCGTAGTACGTTCGGCAGTGCTTGCGTACAGCAGTCTGCTGCCGCTG
GAGACACTGGTGAGAGTGTCACAGCAACCGATCAATCCATTCAGGGGAGG
TCGGGCGGAGAATGCGGCACGGCGGAAGGGTCGTGCCCACTGTTCTGCCT
TGCTGTAGTAGCGGGCGGGGCGCACAGAAGTCGCCGGAATTCATGGTGCA
ACAGAACGGACGGAGGGGCCGTGAAGTCGCGCAGTTTTGGCGCGCACTCC
ATCTGCGGTAAGGCGGTGGATCAACACGAAAGGCGTTAGAGTAATCGGCG
CAACAGAACGGACGGAGGGGCCGTGAAGTCGCGCAATGTTGGCGCGCATT
CCATCTGCGGTAAGGCGGTGGAGCATCAGGACGGTAGAGAGACCGTTGGG
CAGGATTGCCGGAGACACTCAACCATGGATCGACCGCGCGACGGCGCGGG
GGGGGGTGGGCGCCGTACATGCTTGATGCTGGCGGTGTTTTGTTAAGTCG
ATCCAAGGCCGGCAGTAGAGGCCGGGTACGCCCTACCACGGTTGACACGC
GCGACGGCGCGTCGGGGGGTGGGCGCCGATCACGCGGGAGCGGGCGGCGT
TTTTTGACCACAGCACGGACGGAGGGGCCGTGGCTGCTTTGCCTCGTCGT
CGGAACGGGGGGGGCAGCATTATAAGGCGCGCGGAGGTGGCGCGCAAACC
CAGCATGGACGGAGGAGCCGTGGCTGTTCTGCCTCGTCATAGGAGCGAGG
GGAGTAGCATATTAAGTCGCGCGGAGGTGGCGCGCAACCATCAGCCGGAG
GTGGGTGGTGGAACGGGGCACAGCTAAGTGGGTGTCATCAAAGTCGCGTG
GGGAGGTGCCGCGCGCATTTCATCAGTCGGGAACGAGCGGTGGAGACAAG
AATGCGTCAGGATGGACGTGAGGAATTAAAGGCGTGCTTCGCCATCAAGA
TGTGTTGGTGGAGTAGTTGGAATAAGCTTGGATTTTGTTGTCTTGTTTTG
TGTGGAGGTACTAGTTTGAGGTCGTGATGAAATCAAGCAACTTGTATTCG
AGGAAATTCTGTTCACTGTTGCGTGTTTCTTTCCGCCGTCATTTGCGCGT
TGTCTTGCACCCAAATCGTGGTTGTTCTGAATGTTTGTGTTCGTCGTTAT
GCCATTAGTGCATCCTTCGCCGGTGACGTTGTGTTGCTGGTGATGATGGC
AAAGTGTCGGGGGGTAGAGACGTTCACGTTGGTAGAATTTGCCACCATCA
CTCATGTGTGGGGGCTACGCGGTTATATGTGACCCACGGCCTAAGTAGGA
GGCGCAACAAGTGTATTGTTTACCTGAAATGTTGAAGAACAAGGGAGGGT
GGAAACGGGCGTGTTTCTTTTGAGAATGTTACGCTTGAAGAGTACGCCCG
GTCTTGGTATTATGCAACTTGACAGGTTGGTGTGTCGGGCAGGTATGCAT
TTGTTGGTGGAAGTCGATTTTGTTTTCACGTACGGAAGCATGTTGGTTGT
GTCTGTTTTGGGAAGCGACATCTAGGTGATGGCCATGTGCGTGTTCCTCT
GGGCGCCGGTGTTGCGCAAGGGAGGGCANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTT
GTTTTCACGTACGGAAGCATGTTGGTTGTGTCTGTTTTGGGAAGCGACAT
CTAGGTGATGGCCATGTGCGTGTTCCTCTGGGCGCCGGTGTTGCGCAAGG
GAGGGCACTAGGCTTAGGTTCCTGGTGTGCTTGTCTATAATGCAGACAGC
GTAGATGCTTGGGGTTCGTAGTACAGCGTTACCAAGTTGTGGGGGGGCGT
TTGTGTTTTGCGTAGTTGTGCTTGAAGGTTCAGTAGCAAGTTGATGTATC
CTTGATTGAAGGAGAACTGAGGATTGATTTGGTAGTTTGCAGATGGTGGA
CCTTGTTTGAAGCAGGCTACATTCGGCAGGTTCTGTATTTCTCAAAAGCG
GGCATCCTTTGGAGAATCGAGTTTGATTGGTTTTTCAGTTGGAAACAGGT
CATGATTTTGAGTTCGTGTAGGATTGCAGATGGTTGAACCGAAGGCAGGG
AGAACGTACCTGTTCGATGCAGTTTTCGTGTGGAATGCAGATAGACAGGG
AGGGCGTTGCCTGTATGTGTGTGACACCTGAAGAGTCAGTTGGTGCTGCA
CAGCAAGGAGTTCGTTCCATCATGTCGGAAGGATTTGTCAGAGGCGTTGC
TCGAGGTAGTAGAGCGTTGCCTAGAATTTGTAATCCGAGCGTCTGGAGTG
GTTTTATCTTTGTCTTCTTGCAGTACGGCCGTTGGAATCATTGGTGATAT
GGACGGCTATTGGATTTTGTTTGAGCCGTTGGAATCTTTCGTGATATGAT
CGGCGTGAGGCGTTGAATTTCTGAGGGGTTTTGATCCGGTGGCCGGGTCT
TCCCTTTACTTTTGGTTTGTCGTTGTATTTCGGTTTTTCGGACGCATTTT
CGACGCACTAGAGGTTCTTCACTGGCGTAAAGAACCAGGGAGGTTATTCG
TGCGAAGAAGTAGATAGTCGAAAAGTAGCC back to topCoding sequence (CDS) from alignment at Scaffold_457:46031..49610- >EsuBft3634_3a-0001 ID=EsuBft3634_3a-0001|Name=EsuBft3634_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=210bp|location=Sequence derived from alignment at Scaffold_457:46031..49610- (Ectocarpus subulatus male Bft15b)
ATGTGGAGGTCCCTGCTGCAGGTGGGTTTGGTGCATTCCAAGACACCAAC
TCTCTTCGTAGTACGTTCGGCAGTGCTTGCGTACAGCAGTCTGCTGCCGC
TGGAGACACTGGTGAGAGTGTCACAGCAACCGATCAATCCATTCAGGGGA
GGTCGGGCGGAGAATGCGGCACGGCGGAAGGGTCGTGCCCACTGTTCTGC
CTTGCTGTAG back to top
|