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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7G873 |
| ProteomeId | EsuBft359_18 |
| Protein domains | PTHR19446 |
| Protein domains | IPR005135 |
| Protein domains | IPR000477 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 102 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.4e-35 |
| EggNOG OGs | COG0553@1|root,COG2940@1|root,COG5076@1|root,KOG1075@1|root,KOG0383@2759|Eukaryota,KOG0384@2759|Eukaryota,KOG1075@2759|Eukaryota,KOG1081@2759|Eukaryota,KOG1474@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00003,RC00004,RC00039,RC00041,RC00060,RC00181,RC00496 |
| KEGG ko | ko:K11367,ko:K11424,ko:K11654,ko:K13506,ko:K14437 |
| KEGG Reaction | R00851,R03875,R03938,R04866,R04867,R09380 |
| KEGG Pathway | ko00310,ko00561,ko00564,ko01100,ko01110,ko05202,map00310,map00561,map00564,map01100,map01110,map05202 |
| KEGG Module | M00089 |
| EC | 2.1.1.43,2.3.1.15,3.6.4.12 |
| Description | acetylation-dependent protein binding |
| COG category | BK |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004,ko03021,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft359_18a-0001 ID=EsuBft359_18a-0001|Name=EsuBft359_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1028bp|location=Sequence derived from alignment at Scaffold_233:181416..183021+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGATGGTGAAGAAGCTTGGAGGATGGAAGCAGAAACTGTGGAAGGG
AGTAAAGTTGGATCTGTTGCTGTTTGGGATTCCAAGGGACATGACGAGGA
TAGAGTTCAAGAACTGTTGTGACAGGGAGGGACTGCACTGCCTAGCAAGG
GGACAAGTAGGCAGAGAACATGAACACTTCCGGGTGAAATTGACCAAGGG
AGACAGCCAAGAGTGCTTGGGGGTTGATATCGAGAAGCTGTCGAACTACG
TAAGGAAGTTTGGATGGAGGGTTTGCATCGCGAACATGATAGAAACAGAG
AAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGCGAAGAAAGGACCGAG
CAGGGCAGTCGAGCAAGCAAGTCAGAAGAAGTCCGAGAAGAAGCGGAAGG
CGAACGATAGAGTGCGCAAAATCTCCAATAGGGAAAAGCGCAAGCTGAGA
GTCGGGTCGTGGAACGTGTGCGGGTTCGCAAGGAGTGAGCGCAAGCGGTT
GGAAATAGTGGACCAAGTAGAACAAAGCGATCTAGATGTAGTGGGGATCC
AAGAGACGTGGGAATTGAAGGATGGTGACGTGGAGACAAGACTGACCCAG
GAAACTACAGGGGGGATCACACTGTTGAACACAGTGGGAAAAGTGTTCTG
TGAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAACATAGCA
TTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACCAC
GTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGAGAAAGCC
GACGCACTGCTTCTTCCTGGAAATGAAAAAGGCATACGACACCGTATGGA
GAAATGGGTTGTGGAAACAACTGTCCAAATACGGGATCAAGGGGAAAATG
TGGAGAGTGCTGAAGAAGATGACAAGAGTGCACGAAAAGCGTGGTCATGT
TAAACGGACAACTGTCAAAATTCTTCGACATTGAGCAGGGGGTCCCACAA
GGTTGCACGCTGTCCCCAACATTGTTCC back to topprotein sequence of EsuBft359_18a-0001 >EsuBft359_18 ID=EsuBft359_18|Name=EsuBft359_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=327bp
MRMVKKLGGWKQKLWKGVKLDLLLFGIPRDMTRIEFKNCCDREGLHCLAR
GQVGREHEHFRVKLTKGDSQECLGVDIEKLSNYVRKFGWRVCIANMIETE
KVRRQEARATEAKKGPSRAVEQASQKKSEKKRKANDRVRKISNREKRKLR
VGSWNVCGFARSERKRLEIVDQVEQSDLDVVGIQETWELKDGDVETRLTQ
ETTGGITLLNTVGKVFCELLNDRIVGVLEKEHSISEGQAGFRKKRGCVDH
VFTVGRIIQGRKRARKPTHCFFLEMKKAYDTVWRNGLWKQLSKYGIKGKM
WRVLKKMTRVHEKRGHVKRTTVKILRH back to topmRNA from alignment at Scaffold_233:181416..183021+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft359_18a-0001 ID=EsuBft359_18a-0001|Name=EsuBft359_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1606bp|location=Sequence derived from alignment at Scaffold_233:181416..183021+ (Ectocarpus subulatus male Bft15b)
ATGAGGATGGTGAAGAAGCTTGGAGGATGGAAGCAGAAACTGTGGAAGGG
AGTAAAGTTGGATCTGTTGCTGTTTGGGATTCCAAGGGACATGACGAGGA
TAGAGTTCAAGAACTGTTGTGACAGGGAGGGACTGCACTGCCTAGCAAGG
GGACAAGTAGGCAGAGAACATGAACACTTCCGGGTGAAATTGACCAAGGG
AGACAGCCAAGAGTGCTTGGGGGTTGATATCGAGAAGCTGTCGAACTACG
TAAGGAAGTTTGGATGGAGGGTTTGCATCGCGAACATGATAGAAACAGAG
AAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGCGAAGAAAGGACCGAG
CAGGGCAGTCGAGCAAGCAAGTCAGAAGAAGTCCGAGAAGAAGCGGAAGG
CGAACGATAGAGTGCGCAAAATCTCCAATAGGGAAAAGCGCAAGCTGAGA
GTCGGGTCGTGGAACGTGTGCGGGTTCGCAAGGAGTGAGCGCAAGCGGTT
GGAAATAGTGGACCAAGTAGAACAAAGCGATCTAGATGTAGTGGGGATCC
AAGAGACGTGGGAATTGAAGGATGGTGACGTGGTAAGCAAACTAGGGAAA
TACCGGTGGGTAGGGAAGGCAAGAAAGGGCTTAGACCCGAAGAAAAGGGG
GGAGGGGGGAGTCGGATTCCTGGTCAAGGAACACTTGTTTGACGTGGTGG
AAGTAGTGGTGAAAACGGAGTTCGAGGCAAGCCTATGGCTGAAGATATCT
TGGGAGCGGGGTGAGAAAGATTTGTTTCTAGGAAAGGTGTACGTCCCACC
GTCGTAGAAGAAAGTCGCAAGCAAGGCGCAGGAGAACCTTGGACAAATTG
GGGAAGATGTCCAGAGGTTCAGTAGGAAGGGAGAAGTTGTCATGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACAATTGGGTGTGGT
GGGTGTGGAAAAACGAGTATACGCCAAGTAGATGGAGGGAAGAAGTGGTT
GTGAAAAAAGGAGACAAGACTGACCCAGGAAACTACAGGGGGGATCACAC
TGTTGAACACAGTGGGAAAAGTGTTCTGTGAGCTGCTGAACGATAGGATA
GTGGGAGTATTGGAGAAGGAACATAGCATTAGTGAGGGCCAGGCAGGTTT
CCGCAAGAAGAGGGGGTGCGTAGACCACGTGTTCACGGTAGGGAGAATCA
TCCAAGGTAGAAAGAGGGCGAGAAAGCCGACGCACTGCTTCTTCCTGGAA
ATGAAAAAGGCATACGACACCGTATGGAGAAATGGGTTGTGGAAACAACT
GTCCAAATACGGGATCAAGGGGAAAATGTGGAGAGTGCTGAAGAAGATGA
CAAGAGTGCACGAAAAGCGTGGTCATGTTAAACGGACAACTGTCAAAATT
CTTCGACATTGAGCAGGGGGTCCCACAAGGTTGCACGCTGTCCCCAACAT
TGTTCC back to topCoding sequence (CDS) from alignment at Scaffold_233:181416..183021+ >EsuBft359_18a-0001 ID=EsuBft359_18a-0001|Name=EsuBft359_18a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=984bp|location=Sequence derived from alignment at Scaffold_233:181416..183021+ (Ectocarpus subulatus male Bft15b)
ATGAGGATGGTGAAGAAGCTTGGAGGATGGAAGCAGAAACTGTGGAAGGG
AGTAAAGTTGGATCTGTTGCTGTTTGGGATTCCAAGGGACATGACGAGGA
TAGAGTTCAAGAACTGTTGTGACAGGGAGGGACTGCACTGCCTAGCAAGG
GGACAAGTAGGCAGAGAACATGAACACTTCCGGGTGAAATTGACCAAGGG
AGACAGCCAAGAGTGCTTGGGGGTTGATATCGAGAAGCTGTCGAACTACG
TAAGGAAGTTTGGATGGAGGGTTTGCATCGCGAACATGATAGAAACAGAG
AAGGTAAGGAGACAAGAGGCGAGGGCGACGGAGGCGAAGAAAGGACCGAG
CAGGGCAGTCGAGCAAGCAAGTCAGAAGAAGTCCGAGAAGAAGCGGAAGG
CGAACGATAGAGTGCGCAAAATCTCCAATAGGGAAAAGCGCAAGCTGAGA
GTCGGGTCGTGGAACGTGTGCGGGTTCGCAAGGAGTGAGCGCAAGCGGTT
GGAAATAGTGGACCAAGTAGAACAAAGCGATCTAGATGTAGTGGGGATCC
AAGAGACGTGGGAATTGAAGGATGGTGACGTGGAGACAAGACTGACCCAG
GAAACTACAGGGGGGATCACACTGTTGAACACAGTGGGAAAAGTGTTCTG
TGAGCTGCTGAACGATAGGATAGTGGGAGTATTGGAGAAGGAACATAGCA
TTAGTGAGGGCCAGGCAGGTTTCCGCAAGAAGAGGGGGTGCGTAGACCAC
GTGTTCACGGTAGGGAGAATCATCCAAGGTAGAAAGAGGGCGAGAAAGCC
GACGCACTGCTTCTTCCTGGAAATGAAAAAGGCATACGACACCGTATGGA
GAAATGGGTTGTGGAAACAACTGTCCAAATACGGGATCAAGGGGAAAATG
TGGAGAGTGCTGAAGAAGATGACAAGAGTGCACGAAAAGCGTGGTCATGT
TAAACGGACAACTGTCAAAATTCTTCGACATTGA back to top
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