Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3575_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 256 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3575_2a-0001 ID=EsuBft3575_2a-0001|Name=EsuBft3575_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2565bp|location=Sequence derived from alignment at Scaffold_544:358138..361439+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCCGTGGTCGGCCACAGGGGCCTTGCACTGAGTGCCAGTTGCTCGT
GTGCTTGTTCGCTGGGCTGCGATTCGTTTCTCCAAGCCACCGCACGCTCG
AAGAAGCCGTACACTCGCTGGCCGAAGCTACCGAGGACGGGGAAATTCAG
CGTCAGCAGGGAGAGAAGCACCGCGAGCTCTTGGACACAGAACGGAAGAG
GCTAAAGAACGTGGAGAAAGAGTGGAGGAAGACCATGGAGGACTTTCAGG
GAAAAGAAGCTTAGGTGAGCCGTTGCATGTATCCCATGCTCTTTCGGAGA
CGGGATTTCTTTGGAAGTCGCAATGTTGGTCAGGGGGAAAAGTTGGGGTT
TCTAACGGCAAGGGCCTCTAAGATCCAACTAGCCGATCAAAAACTGTTTT
GATGGGATGGTTTGCGAGAATTACCCAAAACTATGGCTAAAGAAATAAAA
GGACGTGTAGCCGGTAGGGCAACAAAAGGGTACGCCCGGCAAACGGGAAG
AAGCCCAGCAGTGGAGGCATGCTGCTGAATGCATGAGAACGACGGCGGCG
CCTGGGACAATTTTGTTCTTTCGCGACGTCTGTAACTTCAGGATCCCCAA
GGGTCTCAACGCAGCCCAGCTGGGCAGAACGTCGGGCCGAGGTGAGCGAG
GGTTTGGCACCACTCTCTCGTACTCTTCCGCCGTGTAGAGGTGTAGAGAC
GATATATAGGACGCACACGAGCGGGAGGCAGTCGCATACATTTGTAGCGC
GGGCTCCTCGTACATACCAGGACAGCCAGTCCATTTTTGAAATGATGGAA
GGTTTTTGTCGGAAGTTGCACTAAATACTGCTGCCGCCTCATGTAAAAAC
AAACCCCGCCGAAAGCGCCGCGAGACATCTTGAGGTTAGCCCGTGCATAT
ATCGTTAGGGTTACGTAGATGTGGTTACGAAGCCTCTCCTCTTCCCGTCG
CATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTATTTTTAGC
ATCGACCGCGCTTGTGTTGTTGTTGTTGTTTGTTGTTTCTCACATTAGCT
CTAAAAAAAGAAAGATTGGGAGCCCGTGGTCTCAAAACCCGGCATACACG
ACCCCACGAAGAAACAGAAAAAAATAGGGTACAAAAACCACTCGGAAGAG
AAACAAAATGATAGAAAGAAAGACCAGCTACCGCACCAAACGAGAAAGAG
CGTCGAGGAGACCGATCAAAATAAAATAAAAGGAGAACGGGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAGGGGGTAACACTGGGG
CTTTTGATTTTTGCCCCATCTTCCTCCTGCGGTGCGTGCCTGGAACTTTT
TATCGCGAGAAGGGTACGGCCGTCCTTTCCCTCGTCAACGTGCTGCTACT
GTAGGTCGAAGTTTGGTACGCACGAGCTTATCCAGCTATGTTATCGCTTT
CACCGACAAAGTCTCAAATTAATCGCCTTCGATGGACTCCAGACTTTGCT
GCCAGTGGGTTCGAGATGAAACCTCTAGGCCATGTAAGACCTGCTAATTT
GTTTTTGTTCCGCTTCCTTCCCTCTCTCTCCGGTCCTCCATTGCGATGTG
CGCCCTTCGCGCTACATGCTCATCTCTAGATCTAGGTCGCTGTCAAACAC
ACGCGTTGGAACTATAAGTTGCTCCTGCCGAAATGAAGGCGCGGTACCCA
GCGCAAAATACAGGATAGGGTTTGTAGCGCTTTTTCCGAGAGTCCGCCCC
CTTGCTATTATTAGC back to topprotein sequence of EsuBft3575_2a-0001 >EsuBft3575_2 ID=EsuBft3575_2|Name=EsuBft3575_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=87bp
MCRGRPQGPCTECQLLVCLFAGLRFVSPSHRTLEEAVHSLAEATEDGEIQ
RQQGEKHRELLDTERKRLKNVEKEWRKTMEDFQGKEA back to topmRNA from alignment at Scaffold_544:358138..361439+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3575_2a-0001 ID=EsuBft3575_2a-0001|Name=EsuBft3575_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3302bp|location=Sequence derived from alignment at Scaffold_544:358138..361439+ (Ectocarpus subulatus male Bft15b)
ATGTGCCGTGGTCGGCCACAGGGGCCTTGCACTGAGTGCCAGTTGCTCGT
GTGCTTGTTCGCTGGGCTGCGATTCGTTTCTCCAAGCCACCGGTAGGCTG
TTTTCCGGCCACTGTAGCTCGTGCAATAGGTTATCGCATTCGGCTCGTGA
ATCTCCGTCCTCGGCACTCACGAAACTCCCCGCCTCAGTTTTCTTATGAT
GGCTTCCTTGGATTGTCAGCACGCTCGAAGAAGCCGTACACTCGCTGGCC
GAAGCTACCGAGGACGGGGAAATTCAGCGTCAGCAGGGAGAGAAGCACCG
CGAGCTCTTGGACACAGAACGGAAGAGGCTAAAGAACGTGGAGAAAGAGT
GGAGGAAGACCATGGAGGACTTTCAGGGAAAAGAAGCTTAGGTGAGCCGT
TGCATGTATCCCATGCTCTTTCGGAGACGGGATTTCTTTGGAAGTCGCAA
TGTTGGTCAGGGGGAAAAGTTGGGGTTTCTAACGGCAAGGGCCTCTAAGA
TCCAACTAGCCGATCAAAAACTGTTTTGATGGGATGGTTTGCGAGAATTA
CCCAAAACTATGGCTAAAGAAATAAAAGGACGTGTAGCCGGTAGGGCAAC
AAAAGGGTACGCCCGGCAAACGGGAAGTAAGTATGAAAATGTTGGTGAGA
AGAGACGGCATCGCCCTGCTCGGCGTGACAAGCACAGCGGACATCCTTTC
GTGGCCGTCGCTCTTTGATTTGAATGGCCTCATGTCTTTCGTCGAGCGGA
GAACCGAAAGCTAAGGCCAATTGTTATGGTAAATTCCAATTTGGAAATTT
GCGAGCTTGGAAAAAGCGGATTCCAGCGGGGAATTCCAATTCGGAATTCC
GGCAGCATCCTAAGTTATGGGACAATTAGAAAATCTGCTACGCGGTGGGT
AGTTGCGTGGGGGGGTGGTGTCGAGTTTCGAGGCACGGAGCTGGCAAGTT
TGAAAAAGGGCGCGCTACCATCGTATCTTGTGGTCCATAATTGTGCCGAG
GGCGTACCGAAAGCATGGCAGCACCACCTGCGGCGAATGCGCCCCCTGAT
CTGAGCACCTGCGAGCCTCTCGACTGGGCGACAGATAATTCCAAGGATCT
CGAGTGGGCGTGGGATCGGTTTCTCTCGCGCCCTTCCCACAGCGGTGAGC
CGTGGACACACCAGCAGCGGGTCTTGCTCCAGAATCCGGCCCTCTACTAC
TCCAACCAATCTGTGAGGGAGAAGGGCGAGATGCAGGAAGCCCAGCAGTG
GAGGCATGCTGCTGAATGCATGAGAACGACGGCGGCGCCTGGGACAATTT
TGTTCTTTCGCGACGTCTGTAACTTCAGGATCCCCAAGGGTCTCAACGCA
GCCCAGCTGGGCAGAACGTCGGGCCGAGGTGAGCGAGGGTTTGGCACCAC
TCTCTCGTACTCTTCCGCCGTGTAGAGGTGTAGAGACGATATATAGGACG
CACACGAGCGGGAGGCAGTCGCATACATTTGTAGCGCGGGCTCCTCGTAC
ATACCAGGACAGCCAGTCCATTTTTGAAATGATGGAAGGTTTTTGTCGGA
AGTTGCACTAAATACTGCTGCCGCCTCATGTAAAAACAAACCCCGCCGAA
AGCGCCGCGAGACATCTTGAGGTTAGCCCGTGCATATATCGTTAGGGTTA
CGTAGATGTGGTTACGAAGCCTCTCCTCTTCCCGTCGCATGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTTTTTATTTTTAGCATCGACCGCGCTT
GTGTTGTTGTTGTTGTTTGTTGTTTCTCACATTAGCTCTAAAAAAAGAAA
GATTGGGAGCCCGTGGTCTCAAAACCCGGCATACACGACCCCACGAAGAA
ACAGAAAAAAATAGGGTACAAAAACCACTCGGAAGAGAAACAAAATGATA
GAAAGAAAGACCAGCTACCGCACCAAACGAGAAAGAGCGTCGAGGAGACC
GATCAAAATAAAATAAAAGGAGAACGGGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNGGAGGGGGTAACACTGGGGCTTTTGATTTTTG
CCCCATCTTCCTCCTGCGGTGCGTGCCTGGAACTTTTTATCGCGAGAAGG
GTACGGCCGTCCTTTCCCTCGTCAACGTGCTGCTACTGTAGGTCGAAGTT
TGGTACGCACGAGCTTATCCAGCTATGTTATCGCTTTCACCGACAAAGTC
TCAAATTAATCGCCTTCGATGGACTCCAGACTTTGCTGCCAGTGGGTTCG
AGATGAAACCTCTAGGCCATGTAAGACCTGCTAATTTGTTTTTGTTCCGC
TTCCTTCCCTCTCTCTCCGGTCCTCCATTGCGATGTGCGCCCTTCGCGCT
ACATGCTCATCTCTAGATCTAGGTCGCTGTCAAACACACGCGTTGGAACT
ATAAGTTGCTCCTGCCGAAATGAAGGCGCGGTACCCAGCGCAAAATACAG
GATAGGGTTTGTAGCGCTTTTTCCGAGAGTCCGCCCCCTTGCTATTATTA
GC back to topCoding sequence (CDS) from alignment at Scaffold_544:358138..361439+ >EsuBft3575_2a-0001 ID=EsuBft3575_2a-0001|Name=EsuBft3575_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=264bp|location=Sequence derived from alignment at Scaffold_544:358138..361439+ (Ectocarpus subulatus male Bft15b)
ATGTGCCGTGGTCGGCCACAGGGGCCTTGCACTGAGTGCCAGTTGCTCGT
GTGCTTGTTCGCTGGGCTGCGATTCGTTTCTCCAAGCCACCGCACGCTCG
AAGAAGCCGTACACTCGCTGGCCGAAGCTACCGAGGACGGGGAAATTCAG
CGTCAGCAGGGAGAGAAGCACCGCGAGCTCTTGGACACAGAACGGAAGAG
GCTAAAGAACGTGGAGAAAGAGTGGAGGAAGACCATGGAGGACTTTCAGG
GAAAAGAAGCTTAG back to top
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