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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 248742.XP_005651294.1 |
| ProteomeId | EsuBft344_4 |
| Protein domains | PTHR31544 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | IPR009288 |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | IPR013024 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | aig2-like protein os:arabidopsis thaliana gn:at5g39720 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 4 |
| Max annot lvl | 3041|Chlorophyta |
| Length | 2650 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.7e-21 |
| EggNOG OGs | 2CZ1E@1|root,2S7T1@2759|Eukaryota,37WE5@33090|Viridiplantae,34MWS@3041|Chlorophyta |
| Ec32 ortholog description | Butirosin biosynthesis, BtrG-like |
| Ec32 ortholog | Ec-05_003730.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Gamma-glutamyl cyclotransferase, AIG2-like |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0006950 |
| GO | 0010033 |
| GO | 0044699 |
| GO | 0050794 |
| GO | 0009617 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft344_4a-0001 ID=EsuBft344_4a-0001|Name=EsuBft344_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2650bp|location=Sequence derived from alignment at Scaffold_340:191741..197029- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGTTCGCTCTAGGCCGGGAACATCGCCGACGATACTGCTGCTGCTTGTCG TGTTCAGAACAGGGCCAGCTTTTCCCCTGCCTGCCAGAAGCTGCACCAGC ACTCTCGGGAGGCCCGCCCGGCAGCAGCCCCAACCAAGCGAGAGCGAGAA ATACTTGGGTCCGAGTTTGCCCCACCTCCGAAATATAACTCGTTGGGCAG CGTTTGTCCTGATGGAGGACGCTGCACCAGTGGGGGCGGCGGCTGCGAGT GCTGCTTCTCCGAGTGCTGCCGATGGGCACGGGGAGGATACGCCGTTGTT TGTTTATGGCACTCTAATGAACGAAAAGGTTCTGTTCGCTCTGCTCAAGA GAGTTCCGTCGACGAGAAAGGCGAACCTTTCGGGGTACCACCGCTTTCGG ATAAAGGACCACGTCTTCCCGGCTATCCGGCCAAGAGAGGGGGGGGGCGT GGAAGGGCTGCTCATGACAGGGCTCGATGCCCGAGAAAAGTTGATCTTTG ATCTGTTTGAGGATGAAGACTACCACAAGGTGGACGTCCAAGTCAAGGTC GAGGCGTGTGAAGACGCAACCCAAACGGCAACGTGCTATGTATGGAACGC CTCAGCGGAGGACCAACTGTACGAGACTTGGGAACCAACGAGACACTTCA CAGAGGATGGACCCGTCCCTGACTATGTCGCCATGGTGGAACGGTTCTCC AAGGAGATTCAAGAAGAAGGCCTGCTGGAAAACACATCTACTGCTGTTGA TGTTGCTGCGTAGCATTGTTATGCTCAATCTGAAATATTATGGCATCCTG TACCTTGCGGGACTCCCTGCTCGCCGCACGAAAAATAAGGTTTTCAACGT ACTTCGGGGGACTAGGACATGGCGGGGGGGGGGGGGAGGGGGGCATCGAC GACGAAACGTCTGGAGACGGAGATTGGGATACATGCGTAGACTACTAGTC TATGTGGCATCGGTAGGGAGAGTTCTACGTTTGGTTTGGTATTGAGGCTG AATATTTGCTACTACGTACAAGTACTCCCTACAGTAGATTGGCGGCACAC CAACTAGCATCATGTTTCCGCTGGATGCCTTCCAACTCCCCATGGGGAGC GCGATCGGGGGAGGGGAGGGGGGGGGAGCGCTACCCCGAACAAAATCGGT TTCTCTGTTCGCTCTGAGCGTTACGTGCCTGGTCTGCGCATCCACATTAA GTCCTGTCTACGCATCAGATACGTCCATAGTAGCACCAGTCTCTTGTCCT TACTACAGCAGTGTTGAAAAGGACAAGTAATGCCGAGGTGTGATGTTCTT ACCGAATCCATGGGTGGAACAAATCTATAAGCTTGCAAGCGGCTTCAGGG TGCTCATGAATTCCCTTTGCGCGGCCCGAACCCAGCCCAGCATTCAGCCA TGGCAGCGCCTCTAGCGCCTCTTTCAGTAGGCTCGCGTACACGTGGAAAC CGACTGAATTTCCAAAGTCGACCGATCGTACACGACGGTGCTACTTGCAA GTCGATGTGCTTGGTGTGCTGCTTGGTTTTTTCCTCGACAACGTGTACGC TGGACAACGTGTACGCTGCTGTTATCTTAGCCTCTTTTCTTCGATAGAGA TGGATTCGTTGGGTCATACTCCCTCCGTTCCCATATATAAGCGTGATTTG GGTTTTCCGAAAATAAGCGTGGTTTGCACTACATGCTCCAAAATAAGTCG TTAGGTCATTGTGGGACGTCGGACAACTTCGGGATGTAATTACATATCAC ATTGGACGAAAAAAAAAAATGTTCCGGTCACAAAGGGAGGGGATGATCCG TTGTCATCCCCTGGTTGGTGAAATCGAGGAAAATCAAGCATAATTGTACC CAGCCACGGGAGAAACGAACTGCGGGTGCCAAATGATTCATGGCCGCATT CAAAAAACAAACTCCCGGGCGTATTTATGGCAGCACCACCCCGTTTTTCG AATGGGATAGCTCGGACATTAAGCTGGGGAGGGGCGGGGGTCAAGTTGGC GTGCGGACAGCAGCAGTAGAATCGCCGCCAAGGTGGTGTTAAAATGTCGC TTTTACAGCAGTAGTGCTCGCACAAGCTTAACACTCATACCCCGTTGTTC ACCATGCATTGCATTCTTCATAGCATTTCCAAATGTATTTGCTCCTTCAT AAACATCCTTGACGCCACAACTGCTGTACGTTTACAATCTGCCACCGCCC TCGTCTGCCTCACTCAGCGGACAAAAAGAGTGTCCAACGCGAAACGCGGT GCTCCTTTCTGCTACACGCAACACGTACACGACATTCTGCCAAAAAAAGG TGCACGGACACCGAAAGCAAATAACTACCCGCCCGCCCCATTCTACACAG CTGCCCCTTGCCCCTCTCCCGTCGAGCTGAGCCCTTGGCTGCCTTGAACG CACCATACGGCAAAACCCCGTTCTTGCTGCCAGTGAGGAGGTGCCGAATC ACCTCCTCTTTTTCTGAATTGTTGAAATTCTTGCGTTTTGCCACCTGGGA GGCCCTCCCAGCAGCAGACATCCCTCACCAGGAGATGAGAAGGCTTTTGG GCGGAGGTTCAAAGTTGGGGTGGTGATTTCGAGCAACTTCTGCTGGGGTA GGACACACCTTTTTGGTTGGTTTGAAAAAAAGCACCGGTTCTGCGCGCCC back to topprotein sequence of EsuBft344_4a-0001 >EsuBft344_4 ID=EsuBft344_4|Name=EsuBft344_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=183bp
MEDAAPVGAAAASAASPSAADGHGEDTPLFVYGTLMNEKVLFALLKRVPS TRKANLSGYHRFRIKDHVFPAIRPREGGGVEGLLMTGLDAREKLIFDLFE DEDYHKVDVQVKVEACEDATQTATCYVWNASAEDQLYETWEPTRHFTEDG PVPDYVAMVERFSKEIQEEGLLENTSTAVDVAA back to topmRNA from alignment at Scaffold_340:191741..197029- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft344_4a-0001 ID=EsuBft344_4a-0001|Name=EsuBft344_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5289bp|location=Sequence derived from alignment at Scaffold_340:191741..197029- (Ectocarpus subulatus male Bft15b) CGTTCGCTCTAGGCCGGGAACATCGCCGACGATACTGCTGCTGCTTGTCG
TGTTCAGAACAGGGCCAGGTGTGTAGAAAGTCGATAGGTTGGCGTGCTTT
AAAAAGAGACTCGCAGAGCTGCCGCCTGTTCTATGCACGTGCAAGTATAG
GATTGAGACGCCCGAAAGCGTTTGTTCATCGCCGCATACAAATAAATTAG
AACGTCTGGTTGCCTCTGATACAGCATTTATTATTGAGGTAGTTACGGCT
GTACCACGGGGTGTGCGAAGTCGGTGTATATTTATTTGCGCTGAACACAA
ATACAGAAGTAATACAGAAGTATCCAACTACAACATTGTGTCCATGTCCT
ACTTACAGCTGGTAAATGCCTAGATTGTCCCTCTTTTTTTCATCTCAATG
CGTAGTTGAAATAAAATACGTCACTGCTGCAGCTGGTAAACGCCGATAGC
AGCTGCTGTTGTACAACTGCTGTACATAAAAAAAATGTGTGTTTGTAGGG
TAGACTACGGGACGCAAGCTGTACGAAGAACAACACCCCGCGAATCGCCG
CCATTCGCCCCTTCGTCCCCCCGGCCTCTGTTATATCATTGCACCACTTC
CGCATGAAGCTTTTCCCCTGCCTGCCAGAAGCTGCACCAGCACTCTCGGG
AGGCCCGCCCGGCAGCAGCCCCAACCAAGCGAGAGCGAGAAATACTTGGG
TCCGAGTTTGCCCCACCTCCGAAATATAACTCGTTGGGCAGCGTTTGTCC
TGATGGAGGACGCTGCACCAGTGGGGGCGGCGGCTGCGAGTGCTGCTTCT
CCGAGTGCTGCCGATGGGCACGGGGAGGATACGCCGTTGTTTGTTTATGG
CACTCTAATGAACGAAAAGGTGCCAGATACTCCTACTTGGTCGGTCTTTT
GCTGCTACTCGCATGTATAATAGCATTGATGTGCACTTGAATGCTTGCAG
CGATCAGTTTACTTGCTGCCTACCAATATCTTTGGTAGGTAGTTCGGTAA
ATATTCGTGTCTACACGCACAGACGATTTTCATCGTGGATACACTGCCTT
ATAGACGACACGCACCACCTGGTCGCATAGGACGAACTGTCGCCAAGCTG
TTTTCGTCTCGACACGTGCGAGTTTTCCTGCCACTTGTTCGCCGTTGTGG
TTGCTTCGAAGAGGGTTCGCCCAGAGGCCGCGAACTGACAGAATGCTGTA
AGCTCTTCCGCAGATACTCCAGAACTACTCTAGCGCGTCGATTGAACGCT
TGTAAATCTCACCAAGAGCGTTTGGACGGAACAGGTTCTGTTCGCTCTGC
TCAAGAGAGTTCCGTCGACGAGAAAGGCGAACCTTTCGGGGTACCACCGC
TTTCGGATAAAGGACCACGTCTTCCCGGCTATCCGGCCAAGAGAGGGGGG
GGGCGTGGAAGGGCTGCTCATGACAGGGCTCGATGCCCGAGAAAAGGTGG
AAACCCCACAATATTTGAAAAGTAGTGAGGTTCATAGGTTTTTAACCCAA
AGAGATGCATATTCGCGTGGCACTTGAGAGAGATCCAAACGCGGCGCTTT
CTCACCGTGTGCACAACGGCTCCCGCAACGGAATATCACGCGCACTGGGT
GACAGACAGAGCAACCGCGATTGTTTCTCGCTTCGATGCCATACCATATG
CTGTACCCGATTGCCCGCTCTCACGACGTGCATCATGGCTACCCTCCTCC
TCGGCCACCGCAGTGTACTTCTACCGAAGTACCAGGCGGGGGGCTACGAA
ATGCTTGGGCCTGTTCCCCTGATCGGTTCAGACCTTGCTGTCCGAAGTCT
TGGCCAGCTCTTGTCGCGCTCAAGTTCGCGATTGGCCATGCTCGACTTTG
TCATTCGCGGACTGTTTTGGCCAACTTCTAGCGCCGTGGCTTTACACTCG
AAAACAACATTGTTCACCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCCCCCCCCCCCCCCCCGGTG
CATCTGTTGAATCTCTGTCGAACCTCCTACAGTTGCCACCTACACCGTCT
TGATTCGCAGTGGCTTGTTTCGGAGTAAAAACTTTTTGACTTTCACGCTT
TTCACCGTGTTATTCCACGGCACCCCTTATATGGATATAACCTTGCTTTC
GTGGGTCTTCCGCTGACGCCGTTTTTTTCCGGGAGCCACAACCGTACAGT
ATATGCAGTTTGCTTGGCCGTTTAGTTGATAGAGTAAGTTCCCATCCCTT
CCATCGCTTCATCCCTGGGGGTATTCTTGTATTCCCGCACTTTCCGTAAA
GGGCGGTACTTTCGACATGCCGATCCCACCTCTCTTCCGCTCTTCATTGA
TTGTTGAGTGTAGCAATTAATTTTTTTTTTCAAGTAAGAGTTTGCCGTTC
CCGCTGTACTATTTTGTTCGTCGCTGCCACCGCCTGTGTTGTGTAAGCTT
GGCCATCACGCCTTTGTTGGTTTTGGGTGTGCCTATTCGAACTACGTAGA
ATATCAACTGCAATCCGGCCGTTCACCACAAGTTTATTCGCGTGCGCTGC
CTGTCCTCTTTCTTGGTCGCCGTTCGCCACGAACCCGGGTTGTCGTGGTT
TTGTGCTTCAACGCCACCCAGTTGATCTTTGATCTGTTTGAGGATGAAGA
CTACCACAAGGTGGACGTCCAAGTCAAGGTCGAGGCGTGTGAAGACGCAA
CCCAAACGGCAACGTGCTATGTATGGTGAGCGAGAGATGTGAGAGGCTTG
ATTCGCTACTGGCAAGCAGCGTTCTGTAGTGGAACCCCAGACTGAGCTGC
CCCCTGGAGTCATGTCTGATTGGTACTGCCGTTCCCTTGGTGATTTCTTG
ACCTCCCTACGTCCGCTGTCCGGTGCTTTGTTTGGTGCCGCTCGCTGTTG
GATGTGTAGCTGTGGCGTTCACGGGATCTCTTGCTCAGCGATATTCTTTT
GTTTGTCCACGTGATGTCGTAGACTGATGGGCAGTACTACATTGGACGGT
CTCACACAAGAGACCTCCCCGCTCTGGTCAGATATTTTGGGGTACGTGCC
TAGAATGCTACCACATTCTTACCACGGGGAGATGGTTAATCTAGTGAAAT
CAACAGATTTTGTCGAGCTAAGCCGGGTGCAGATGGTCGAACAATTGTGA
AGGTGGCAATAGCAACAGCAGCCGACCTTGTGCGATTCCCTCATATGTCC
GCCGCTTCTTGTACCCGTTGCCCTGTATGGTAGGAACGCCTCAGCGGAGG
ACCAACTGTACGAGACTTGGGAACCAACGAGACACTTCACAGAGGATGGA
CCCGTCCCTGACTATGTCGCCATGGTGGAACGGTTCTCCAAGGAGATTCA
AGAAGAAGGCCTGCTGGAAAACACATCTACTGCTGTTGATGTTGCTGCGT
AGCATTGTTATGCTCAATCTGAAATATTATGGCATCCTGTACCTTGCGGG
ACTCCCTGCTCGCCGCACGAAAAATAAGGTTTTCAACGTACTTCGGGGGA
CTAGGACATGGCGGGGGGGGGGGGGAGGGGGGCATCGACGACGAAACGTC
TGGAGACGGAGATTGGGATACATGCGTAGACTACTAGTCTATGTGGCATC
GGTAGGGAGAGTTCTACGTTTGGTTTGGTATTGAGGCTGAATATTTGCTA
CTACGTACAAGTACTCCCTACAGTAGATTGGCGGCACACCAACTAGCATC
ATGTTTCCGCTGGATGCCTTCCAACTCCCCATGGGGAGCGCGATCGGGGG
AGGGGAGGGGGGGGGAGCGCTACCCCGAACAAAATCGGTTTCTCTGTTCG
CTCTGAGCGTTACGTGCCTGGTCTGCGCATCCACATTAAGTCCTGTCTAC
GCATCAGATACGTCCATAGTAGCACCAGTCTCTTGTCCTTACTACAGCAG
TGTTGAAAAGGACAAGTAATGCCGAGGTGTGATGTTCTTACCGAATCCAT
GGGTGGAACAAATCTATAAGCTTGCAAGCGGCTTCAGGGTGCTCATGAAT
TCCCTTTGCGCGGCCCGAACCCAGCCCAGCATTCAGCCATGGCAGCGCCT
CTAGCGCCTCTTTCAGTAGGCTCGCGTACACGTGGAAACCGACTGAATTT
CCAAAGTCGACCGATCGTACACGACGGTGCTACTTGCAAGTCGATGTGCT
TGGTGTGCTGCTTGGTTTTTTCCTCGACAACGTGTACGCTGGACAACGTG
TACGCTGCTGTTATCTTAGCCTCTTTTCTTCGATAGAGATGGATTCGTTG
GGTCATACTCCCTCCGTTCCCATATATAAGCGTGATTTGGGTTTTCCGAA
AATAAGCGTGGTTTGCACTACATGCTCCAAAATAAGTCGTTAGGTCATTG
TGGGACGTCGGACAACTTCGGGATGTAATTACATATCACATTGGACGAAA
AAAAAAAATGTTCCGGTCACAAAGGGAGGGGATGATCCGTTGTCATCCCC
TGGTTGGTGAAATCGAGGAAAATCAAGCATAATTGTACCCAGCCACGGGA
GAAACGAACTGCGGGTGCCAAATGATTCATGGCCGCATTCAAAAAACAAA
CTCCCGGGCGTATTTATGGCAGCACCACCCCGTTTTTCGAATGGGATAGC
TCGGACATTAAGCTGGGGAGGGGCGGGGGTCAAGTTGGCGTGCGGACAGC
AGCAGTAGAATCGCCGCCAAGGTGGTGTTAAAATGTCGCTTTTACAGCAG
TAGTGCTCGCACAAGCTTAACACTCATACCCCGTTGTTCACCATGCATTG
CATTCTTCATAGCATTTCCAAATGTATTTGCTCCTTCATAAACATCCTTG
ACGCCACAACTGCTGTACGTTTACAATCTGCCACCGCCCTCGTCTGCCTC
ACTCAGCGGACAAAAAGAGTGTCCAACGCGAAACGCGGTGCTCCTTTCTG
CTACACGCAACACGTACACGACATTCTGCCAAAAAAAGGTGCACGGACAC
CGAAAGCAAATAACTACCCGCCCGCCCCATTCTACACAGCTGCCCCTTGC
CCCTCTCCCGTCGAGCTGAGCCCTTGGCTGCCTTGAACGCACCATACGGC
AAAACCCCGTTCTTGCTGCCAGTGAGGAGGTGCCGAATCACCTCCTCTTT
TTCTGAATTGTTGAAATTCTTGCGTTTTGCCACCTGGGAGGCCCTCCCAG
CAGCAGACATCCCTCACCAGGAGATGAGAAGGCTTTTGGGCGGAGGTTCA
AAGTTGGGGTGGTGATTTCGAGCAACTTCTGCTGGGGTAGGACACACCTT
TTTGGTTGGTTTGAAAAAAAGCACCGGTTCTGCGCGCCC back to topCoding sequence (CDS) from alignment at Scaffold_340:191741..197029- >EsuBft344_4a-0001 ID=EsuBft344_4a-0001|Name=EsuBft344_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=552bp|location=Sequence derived from alignment at Scaffold_340:191741..197029- (Ectocarpus subulatus male Bft15b) ATGGAGGACGCTGCACCAGTGGGGGCGGCGGCTGCGAGTGCTGCTTCTCC GAGTGCTGCCGATGGGCACGGGGAGGATACGCCGTTGTTTGTTTATGGCA CTCTAATGAACGAAAAGGTTCTGTTCGCTCTGCTCAAGAGAGTTCCGTCG ACGAGAAAGGCGAACCTTTCGGGGTACCACCGCTTTCGGATAAAGGACCA CGTCTTCCCGGCTATCCGGCCAAGAGAGGGGGGGGGCGTGGAAGGGCTGC TCATGACAGGGCTCGATGCCCGAGAAAAGTTGATCTTTGATCTGTTTGAG GATGAAGACTACCACAAGGTGGACGTCCAAGTCAAGGTCGAGGCGTGTGA AGACGCAACCCAAACGGCAACGTGCTATGTATGGAACGCCTCAGCGGAGG ACCAACTGTACGAGACTTGGGAACCAACGAGACACTTCACAGAGGATGGA CCCGTCCCTGACTATGTCGCCATGGTGGAACGGTTCTCCAAGGAGATTCA AGAAGAAGGCCTGCTGGAAAACACATCTACTGCTGTTGATGTTGCTGCGT AG back to top
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