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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft343_13 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Length | 138 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft343_13a-0001 ID=EsuBft343_13a-0001|Name=EsuBft343_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1380bp|location=Sequence derived from alignment at Scaffold_246:326942..330699- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGCGACACCGGGCCGGTACCACCTTCGCCATGCGTGCGGCCTCTGCT
ATCGGCACTGCACCTGTGGCGAGTGACGCCGACAGAGGAATCACTCCGCA
AGATCATTCGGCCGTCGAAGGGGCAACTGCCGATTGTCCTTAGAGCTACC
CGTATGGCCGGTCGAAAAGTGGTCCTGAGCGTGTGGGCCGTGTCAGACGG
GGAAGCCATGACTGTCAGCGTCTATGATCACAAGGCCGTTCAAAACCTGG
AGATCACCTTGCTGTGTGGCTGGTGGGCGGAGCTTGGGATTACGGGTCTC
AAGTCCATGGCACCTGCGGGGCTCAGCGGGTTAGCAGCATACTTGGTGCA
AAGCATCTCGCTTCAGATCCCGCAGCCAGACCGCAAGGGACGGGTGGACA
TGTCGAAGGCTTCGCTGCAGTTCAGCCCAGGCCCACCGCCGCCCCGGTTC
GAGTTCGGTCCTTCCCAGTTCGACCGAAGAAACCCTTCCGATGGCAGCGA
AGCGGGCGACACCTTGAGGCCACCAGTGGGGGGCAGGACGGCGAGCCGCG
TTGTGTGGAGGGGCATCCGCACATTGAGGCGGCGAGCCGTGCTGCTGGCA
TGCGCTCGGAACATCACCTTCCATGAAGATGATTGGAAGACTTGGAAGGA
CGTGACCGAGCCAACAAAGGTGGCCACGGCTTCCTTCTTTGCAACGGCAA
GAGAAGGTGATGAGCAGCGGGAGCCACAACACATCGCTTCGCATGGCCCA
GCACGATCCAAAGAACAAGACCAACGCGACAAAGGCGACGACATCCGACA
AGGCTCTTCCACCGCTGCCACCACGCTTGAAGGTAGAGCAGGCTCATCGA
CCGATAGCGGAGCTGCTGCTTCTATTTCTGATACCGGCAGTGTGGACGAA
ACTCATAACGTCCCCGGCTCGAGCGGCTCCGTCACCGTCCCAAAGAGAAG
CCCCATCACCGCCGTCGCAACCGACCAGGCCAGCACCGATCGCTTGTGCG
AGGCTATCGCTGATCGTGTCGAGGTGCGCTCGGAAGGGAGGGGCGGGAAG
ATTGCGCTAAGAACGACACGGCGGCGTGGAGCGGGAGAAGCGAAGGCCGG
CAGCGGCAGCGGCGGTAGCAAGCAGGTGGGGGCGGGTAGCAGGGGCGGAG
CGGGGCACGGGCATGAGGAGGAGGAGGAGGAGGAGGGGGGCAGGGAGGAG
GAGGAGGAGGAGGAAGAAGTGGAAAAGGATGAGGATGAGGACAGGGACGC
GGGGCGCGCTTCTAACGAAGGGTTGTACGGAGGGCGGCTAGAGACGTTGG
GAGGGACGGTTGGAAGTGAGATTGGTGGACACGACTCTCGGGGACAGGAG
AAGGGACAGGTAATCCGGTACAAAATGTGA back to topprotein sequence of EsuBft343_13a-0001 >EsuBft343_13 ID=EsuBft343_13|Name=EsuBft343_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=459bp
MCDTGPVPPSPCVRPLLSALHLWRVTPTEESLRKIIRPSKGQLPIVLRAT
RMAGRKVVLSVWAVSDGEAMTVSVYDHKAVQNLEITLLCGWWAELGITGL
KSMAPAGLSGLAAYLVQSISLQIPQPDRKGRVDMSKASLQFSPGPPPPRF
EFGPSQFDRRNPSDGSEAGDTLRPPVGGRTASRVVWRGIRTLRRRAVLLA
CARNITFHEDDWKTWKDVTEPTKVATASFFATAREGDEQREPQHIASHGP
ARSKEQDQRDKGDDIRQGSSTAATTLEGRAGSSTDSGAAASISDTGSVDE
THNVPGSSGSVTVPKRSPITAVATDQASTDRLCEAIADRVEVRSEGRGGK
IALRTTRRRGAGEAKAGSGSGGSKQVGAGSRGGAGHGHEEEEEEEGGREE
EEEEEEVEKDEDEDRDAGRASNEGLYGGRLETLGGTVGSEIGGHDSRGQE
KGQVIRYKM back to topmRNA from alignment at Scaffold_246:326942..330699- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft343_13a-0001 ID=EsuBft343_13a-0001|Name=EsuBft343_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3758bp|location=Sequence derived from alignment at Scaffold_246:326942..330699- (Ectocarpus subulatus male Bft15b)
ATGTGCGACACCGGGCCGGTACCACCTTCGCCATGCGTGCGGCCTCTGCT
ATCGGCACTGCACCTGTGGCGAGTGACGCCGACAGAGGAATCACTCCGCA
AGATCATTCGGCCGTCGAAGGGGCAACTGCCGATTGTCCTTAGAGCTACC
CGTATGGCCGGTCGAAAAGTGCGTCTTCACTCCACGGGTTGCTCCCGCAT
GTGTAGATTTGTTGCACGGGGACTCCATTTTTCCCTGGCAGTATCACCGC
CACTTCTGGAAGGTGTTCGCCAATTGTCGGCGTACGTATGTTGCCATAGC
GCGACCGGAGTGTGATCGAAGCGCCCAAGCTGTTTGCGTAGAGGGGTGAC
ACAATATCATACACCAGGTACAGGATTTTGTCATGTCGCATGCAGGAACC
TTCCACCATACTCAGTACCGTACCCGTAGGCTGTAGGTGCTTCTATAGTA
CGTACTCGACACGTTACTGTAGACTCCTGACGTACGACAGTGAGAGACGC
CGCCGTTGCTGCTCTGCTGGTCGGTAATGACACCGAATGTCGGAAAAAAA
ATGCTCGCCAAGGATGTGGAATGGAACACCAAGCAGGTAAAGTAGGGCTT
CAACTGACCCAACACACATGGGCAGCGCCCTCAATGCACAATTCACACAA
CCAACAAATTCTTGATCATGTCGACTGTTACCCTGTAGGTGGTCCTGAGC
GTGTGGGCCGTGTCAGACGGGGAAGCCATGACTGTCAGCGTCTATGATCA
CAAGGCCGTTCAAAACCTGGAGATCACCTTGCTGTGTGGCTGGTGGGCGG
AGCTTGGGATTACGGGTCTCAAGTCCATGGCACCTGCGGGGCTCAGCGGG
TTAGCAGGTAAGGCAGGCACAGTGGTCATGGCACCCTGTGTCTGATTCCT
GATACCTACACATACAACCCAGGGCCTGCGAAGCCTTGACACTTGTGCAA
CCGAAATCCTCTTGATGCAGTCCTGATGTTCTTGCTCGAATGCAGTCCAC
ACCTTTCCTGGATACTATTGAAGGCCCTATTCTACTCCATTCCCGTCGTC
GAACGAAAACCGCCGGGTTCACTCGTGTACCATGCCATGATGTTGTGACA
CATCACAACACACCGTTAAGACATCATTTTCCGAATGGGTCATCAGAAGT
CGCGACAATGATGGTGAGTGTCATGACTCGGGCCATGGCCCACTTGGAGT
AACTCGGCCATGACCTGTCTTGGCAGAGCCGTGGTAGGTCATGACAGATC
ACTCCTCCGCCATGACCTGCTCATAGCACGGTCATGACAGATGTTGCATT
CCCTGCATTTCAAACTCAATATAATGTGTTGCAGTCCGGACTCGCAGGTG
GCATGACTTGGTCATGGCCAAGTCATTACCCGGACGTGGCACGGTATACT
CTAGCGCAGCTCCCTGTTTCCTTTGACGACCAGCAGAAGCGTTGATAACT
CACGACTTCGCGACCTCGTGTGTGTCGAGGGTGAAAAGGTTGATGCGGTA
GGAAGCAACATTTGTATCCCCCCCGCGCCCCTACCGTGCAGCATACTTGG
TGCAAAGCATCTCGCTTCAGATCCCGCAGCCAGACCGCAAGGGACGGGTG
GACATGTCGAAGGCTTCGCTGCAGTTCAGCCCAGGCCCACCGCCGCCCCG
GTTCGAGTTCGGTCCTTCCCAGTTCGACCGAAGAAACCCTTCCGATGGCA
GCGAAGCGGGCGACACCTTGAGGCCACCAGTGGGGGGCAGGACGGCGAGC
CGCGTTGTGTGGAGGGGCATCCGCACATTGAGGCGGCGAGCCGTGCTGCT
GGCATGCGCTCGGAACGTGAGCGTGCTTTTGGATGATGCCATCGATATTT
GTTTGGTTGCTATGTGTGCGAGGAACGTAATCTCTGTGGAACGCGTGTCT
GTGAAACATGGAGCATATATCGTCGCAATTTTCGACAGTTGCCAACAGCA
CTTGACATGTATCGCCAGCCCTTACGACAACCGCCTGAGCCGAAGGGGCG
TATCTCAAGGCACACGGGAACGTTTCGGTGGTACCGTCTTTTGTTTTTGC
TGGATGTCCCTCCTTACACCATTTTGGCATAACTCTGGTCGCACCAGCCG
GGGTCACACAGGAGGAAGACCACACAGCACTAGGAGGTGCTTTTTCGCCT
TCCTTTTGCGACGCTTGCCTTGATTTTTTATTATACCTGAGGGTTCGCTC
ACTCTCCTGTACGGATGGGGCCGTTGCGTCCTGCATACCTTCGTGTCCAC
ACGCACGCAGGGTCCATCGATGATGATCGTTCGGGGATGGGATTCTTCCA
TGGCGTGGCGGATGACGAACGTGGTGAGCTGAATGGTAGAGAATAGAGAG
CATTGACGGCAAAAAGAAGACTTGTTGCAGGAAGTTCTGCTTCCGAACAA
ACAGAGAAAGAAGAGGGAAAATAGTACTAGAGTGATAGAAACCCTTACAC
AGCAGCTTCCGAGCAGCCAACGTCATGCTGCAGAAGCAGCCGCATGGTGA
CGTCAAGTTAGACGAGTGAGTTATTCGGTCATGGCAGAAATTCGAATATA
TGACAACGGTTTGGGAAGTTTGGATGTATCTCAGTAAGACAAAGTGGAGG
TGGAGAATGCCTACAGGAGTGATATTGCTGTCGCTGGAACCTACTGAGTA
GCGGTTACTGCTAACAATAGTAGTGGGTGGGTGTTGTAAACAATATGTAC
CTCCACAAGAATTGCATCAACTGCAGCGATCGATACGGAAATGAGATGTC
CTACATGCTGGCGCCCTGAGAATATACATATTGACCACTTAAGGATTGCG
ACGGTGCATTCTCATGGCCGCCGTCAACACTATTCATGGGCATCTAGTAA
AGCGAAAACTCGAAAGTTTTGTTCTGGAGTAGGCCTTCAAAGAAGTTTGC
CCCAATTGATCACCACTGAGATGCCCATAGTCGAATCTCCTACGTGCGTG
CCACGCGGCCCATCGTGTTCCGAACTGAAACTGAAAGCAGATCACCTTCC
ATGAAGATGATTGGAAGACTTGGAAGGACGTGACCGAGCCAACAAAGGTG
GCCACGGCTTCCTTCTTTGCAACGGCAAGAGAAGGTGATGAGCAGCGGGA
GCCACAACACATCGCTTCGCATGGCCCAGCACGATCCAAAGAACAAGACC
AACGCGACAAAGGCGACGACATCCGACAAGGCTCTTCCACCGCTGCCACC
ACGCTTGAAGGTAGAGCAGGCTCATCGACCGATAGCGGAGCTGCTGCTTC
TATTTCTGATACCGGCAGTGTGGACGAAACTCATAACGTCCCCGGCTCGA
GCGGCTCCGTCACCGTCCCAAAGAGAAGCCCCATCACCGCCGTCGCAACC
GACCAGGCCAGCACCGATCGCTTGTGCGAGGCTATCGCTGATCGTGTCGA
GGTGCGCTCGGAAGGGAGGGGCGGGAAGATTGCGCTAAGAACGACACGGC
GGCGTGGAGCGGGAGAAGCGAAGGCCGGCAGCGGCAGCGGCGGTAGCAAG
CAGGTGGGGGCGGGTAGCAGGGGCGGAGCGGGGCACGGGCATGAGGAGGA
GGAGGAGGAGGAGGGGGGCAGGGAGGAGGAGGAGGAGGAGGAAGAAGTGG
AAAAGGATGAGGATGAGGACAGGGACGCGGGGCGCGCTTCTAACGAAGGG
TTGTACGGAGGGCGGCTAGAGACGTTGGGAGGGACGGTTGGAAGTGAGAT
TGGTGGACACGACTCTCGGGGACAGGAGAAGGGACAGGTAATCCGGTACA
AAATGTGA back to topCoding sequence (CDS) from alignment at Scaffold_246:326942..330699- >EsuBft343_13a-0001 ID=EsuBft343_13a-0001|Name=EsuBft343_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1380bp|location=Sequence derived from alignment at Scaffold_246:326942..330699- (Ectocarpus subulatus male Bft15b)
ATGTGCGACACCGGGCCGGTACCACCTTCGCCATGCGTGCGGCCTCTGCT
ATCGGCACTGCACCTGTGGCGAGTGACGCCGACAGAGGAATCACTCCGCA
AGATCATTCGGCCGTCGAAGGGGCAACTGCCGATTGTCCTTAGAGCTACC
CGTATGGCCGGTCGAAAAGTGGTCCTGAGCGTGTGGGCCGTGTCAGACGG
GGAAGCCATGACTGTCAGCGTCTATGATCACAAGGCCGTTCAAAACCTGG
AGATCACCTTGCTGTGTGGCTGGTGGGCGGAGCTTGGGATTACGGGTCTC
AAGTCCATGGCACCTGCGGGGCTCAGCGGGTTAGCAGCATACTTGGTGCA
AAGCATCTCGCTTCAGATCCCGCAGCCAGACCGCAAGGGACGGGTGGACA
TGTCGAAGGCTTCGCTGCAGTTCAGCCCAGGCCCACCGCCGCCCCGGTTC
GAGTTCGGTCCTTCCCAGTTCGACCGAAGAAACCCTTCCGATGGCAGCGA
AGCGGGCGACACCTTGAGGCCACCAGTGGGGGGCAGGACGGCGAGCCGCG
TTGTGTGGAGGGGCATCCGCACATTGAGGCGGCGAGCCGTGCTGCTGGCA
TGCGCTCGGAACATCACCTTCCATGAAGATGATTGGAAGACTTGGAAGGA
CGTGACCGAGCCAACAAAGGTGGCCACGGCTTCCTTCTTTGCAACGGCAA
GAGAAGGTGATGAGCAGCGGGAGCCACAACACATCGCTTCGCATGGCCCA
GCACGATCCAAAGAACAAGACCAACGCGACAAAGGCGACGACATCCGACA
AGGCTCTTCCACCGCTGCCACCACGCTTGAAGGTAGAGCAGGCTCATCGA
CCGATAGCGGAGCTGCTGCTTCTATTTCTGATACCGGCAGTGTGGACGAA
ACTCATAACGTCCCCGGCTCGAGCGGCTCCGTCACCGTCCCAAAGAGAAG
CCCCATCACCGCCGTCGCAACCGACCAGGCCAGCACCGATCGCTTGTGCG
AGGCTATCGCTGATCGTGTCGAGGTGCGCTCGGAAGGGAGGGGCGGGAAG
ATTGCGCTAAGAACGACACGGCGGCGTGGAGCGGGAGAAGCGAAGGCCGG
CAGCGGCAGCGGCGGTAGCAAGCAGGTGGGGGCGGGTAGCAGGGGCGGAG
CGGGGCACGGGCATGAGGAGGAGGAGGAGGAGGAGGGGGGCAGGGAGGAG
GAGGAGGAGGAGGAAGAAGTGGAAAAGGATGAGGATGAGGACAGGGACGC
GGGGCGCGCTTCTAACGAAGGGTTGTACGGAGGGCGGCTAGAGACGTTGG
GAGGGACGGTTGGAAGTGAGATTGGTGGACACGACTCTCGGGGACAGGAG
AAGGGACAGGTAATCCGGTACAAAATGTGA back to top
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