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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft342_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 126 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft342_7a-0001 ID=EsuBft342_7a-0001|Name=EsuBft342_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1263bp|location=Sequence derived from alignment at Scaffold_630:1228040..1236180- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCAGCAGCCAGCAGCAGCAGCAGGGGCTGCGGTTGTGGAGACGGGCGAGT TGGTTTCCTCTCATCAGCTCATTAGCTCATCAGGAGGAGGAGCGGTTGTG CGCCAAAAAGCGAGGACAAGCTGGTGCCTTGAGCGATCCAGAGAGAGAGT CGACGAAGAACGAGAAGGGCTCATGGGATACGGTAGTGAGGGGCCAGTCA TCTCCGATGGGCCGTTACCCGTCGACAAGAACACAGGTGCAAGCTCTTCG CTCGCATGTCAGCTTGGAGGGTGGGGTGCTGGATGCGTGCGGAGCGGCTA GTGGTACCCTGTCCAGGGTCCTGAAAGATACTGGGCTTCATGTATCTACC AACGACCTCAATTGCAAATTAACGGCGGACACCCACGTTGACGCGGCTTC GGAGGAGTTCAAGGCGGTGTTTAGCGAGGACGGGCGGAGGCCTGGCTGGA TTGTCCCAAGCCCCCCGTATGGCAACGCATTTTGCATCTTGGCACAGGCG CTACTGGTTGCACATGTGGGTGTAGCGTTTAAGCTTGGGCTTTTTCTCTT GGAGCCCACGAAAACGCGCGGAATGGCTAAAAGATATCCCGCCAAGCGCA ATAGTGGTTCTGCCCCGCGCGACGTACCGTGGGCGTCAGTGTTGTTTCAC AGAGGCGTGGTTTGTTTGGCGTCGTGAGGTAGGCGACGACCAACCCGCCA GACAGGCGTTTCTTTTTTGCTGGGGGCTACTGAACCGGGGGTCTGCTCGT GTTGCTGATGTGTGGGTGCGTGCTGAGGACTGGTTCCCACTTGGTAGGTA CCGTTCGTCGGCAGTATCTCCCCAACCCCCTGCCCCCCTCCTACAAGGGC AAGTATATTTTGTTTTGTTTTTTTGTGCGAAAGAAAAAGCTTCCCCAGTT GCCCTTCTTCGGTTTCTTAGAGACACTGTCGAAGGAACTTTTTTGGCCCA AGAACGTGGGTTAGGTCAGCGACGTGTGTGTGTATGTATAACCGGGTGGC GGCCCAATAATGAATTGCGCGCGGTGGAGTGGCAGCACAAACGCAACAGT TTTTCCGTGGATTTTCCGCCCGAGATGTCAGTGTGTTGGTATGTTTTTTT TGTTGCGCCCATATACCTATGAGAACGCAACGGGGTGCTTGTGATGCCAA ACCATGTGTAGGAGTTACACGGGTCTGTCTCGAGAGATCCCTCGGTACGT GTGTGTGCCATAGTCGGGTGGGCTGCCTGGTGAAGGCTTACGGAACATGC AAAATATGACTTC back to topprotein sequence of EsuBft342_7a-0001 >EsuBft342_7 ID=EsuBft342_7|Name=EsuBft342_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=42bp
MGYGSEGPVISDGPLPVDKNTGASSSLACQLGGWGAGCVRSG back to topmRNA from alignment at Scaffold_630:1228040..1236180- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft342_7a-0001 ID=EsuBft342_7a-0001|Name=EsuBft342_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=8141bp|location=Sequence derived from alignment at Scaffold_630:1228040..1236180- (Ectocarpus subulatus male Bft15b) GCAGCAGCCAGCAGCAGCAGCAGGGGCTGCGGTTGTGGAGACGGGCGAGT
TGGTTTCCTCTCATCAGCTCATTAGCTCATCAGGAGGAGGAGCGGTTGTG
CGCCAAAAAGCGAGGACAAGCTGGTGCCTTGAGCGATCCAGAGAGAGAGG
TGTGTTCGGAGTGCGCGCGTGTGTGCCAACTTTTAGTTACGCCATGACGC
TCCCCTTGGGATGTGGGTATCTCGTGCGTAAGTAGACGCAAAGATAGCGG
ACACCCTGCGGTGTTGAGTGCACCCCACGGATGAACGTGCCTACAGCGTC
TCCGTTGGCAAGTAGCGCGTCGGAATTTTTTAATTGTATCTGATGACTGG
CTGTGGTTTCCTGGCCGAAGGAGAAATAAAGTCCGACCGTAAACTGTAAT
ATTTCAACCATGTCTATACGGATGGGAAGACAGACAGACGCGTTCGTGCG
GTGCGGTGTGCTTCTTGGTTCGACCCCTCCCATGATTACCGAATGTGTGT
GTGTCCTCTCTCCATCGGCGGACTGGCGGGCTCCCTTTTTTTGATGGCCC
GTGTGTTTCGTTGGTGATGTTCTCACTCCCTCAGATCGGAGTGCGGCAGA
CCACGTTTTGGTGTGTCCAACCCTCTCAGCCTGTCTTCGTCACGCTGCAG
ACAGAAACAAAACTACTTCGAAGTATCCCAAAGTATGCATGTCATATACT
GCAACGACCTGCTGGTGCGTCGTGTTTTGGTTCCATCCACCCTTTGCGTG
GCTTCACGCTGTGAGGCATGAGCACAGGCAGCCGATGTGCTTCGCACCAC
CTCCGGAGGCGCATGCAGTGCATGGAAGCCAGCGGGCTGTCAATCTGCAA
GGTGTATTTCACCGCGTTTTAGCATTTTGGCGTTGCACACGTACAAGTTG
CCAACCAGAGAAGCCAGCACTGGCCAAAAAAAGAACGATACACAGCACTG
CCGGGAGAGCTTGACCCGCTGCAGCTTACTTTTGTTGCACACCACCGGAA
ATAAACCTTCCCTTCTACTTTGGAAGTTGTGCTTAGTATAATACAACTAC
AAGTCCGGCCGTTACTTAGTTGGGGATTGCACTCTGCATCTCCGCGTCTG
TCCTATGTCTATTCTGTGAAGGGTATATTTTCCAAAGACACCAACACCGG
GAAAAACACAGCGGTGGTTGGGTAAGGACGGCCATGGGCAGTCAGCTCTC
ATGCCCCACCCAGAGCTGCTACTTCGAACATAGCACAACGTCATGATGGT
GCTAGTGGCATGGGCAGTGATGTTGGCTGAGGTTCCGCCGCACTGTTGCG
ATCGTGGTTTTTTCGTTTTTTCGTGGTGCGGATAGGCTTTTTCCCCCGCA
GGCGACTGCCGAAAACGCCGAATTCCGAAATATTTCGCCGAAAAAAGAAA
CTGCCCGCCGAAAAAAAAACTGTCACCGAAAACCAAAAAGTACTTTTCTA
TGATAGAGATGGCACATCAGCCGCACATACTTCGCACATATGCATACCAA
ACTGAGAATATGTTTGTAAACTGATGGAGATTGCATGTGTTAGAACTAAT
AGGGTGCGACACACAAAACGCCCGACTACCCAACAGTACCCAACACCTTT
CGTCTGCACCTTCCCAACATAACATATATGCGACACACAAGACAGCTACC
AAACTGATTTGTTGAGCCTGTTACCCACAGGGGAGATGTCCCTATATGCT
GTCTGGGAAATCGTAGACACACAGGTAGTTTTCTCTGACGCTATGATTCC
ATTGTTAATCTGTCTCTGACTCTTTTCTCTATGATAGAGATGGACTCGTT
GTGTCATATTAAGAAAAAAAAAAAAAGTACTTCACTTTTCAGTGTGTTTT
TTCGTACAACTACAACCATCCAGGGTCACACGGGAGGGGGGTAAACACCA
GGGCTTTTTTCTTCTTTGTTTTTTCTTGTCATGCCCCACCTTCCTCCTGC
GGTGCGTGCTGAGTTTTATTTTTATCGCGAGAAGGGTCCTGCCGCCCCTT
TCCCTCGTCAATGATGCTAACGTCGAAGTTTGGTACTCACGAGAGCTTGT
CAGCTACAGTTCGCTTTCACCCGCACATGTCGTAAATTTTTTACCCCATC
GGGATCCGAACTCACGACCTCTGCGACTAGCGGATTACGAGGATACCACT
AGACCACCGGGGCGACCGATGCTCTGATGTATATGCTGACCAATCTCCAA
AGTCGGTCTCAAATGAGATAGGTAAGAGAGGATGAGGCGTTTCTTGCTTC
CGGGGTATGTTCCGGAATATCCCCCCGTCGACGGTTGTTGCCAACAACGT
CCATAGCACGCTGTTCAGACTTCCCCACCACCTACCCTTTCTTCCCCTCG
CTGCCTCGGCAAGGTTTTGCGTAGGCATGACCCATAGCGAGTGGGGGGGG
GGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGAAAAAACCGGAGGTAAA
AAAAAAAAACGGTATCCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGT
TTTACAACGTCTTTGCCAAGCGACGAAAACCCAANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGACGAAAACCCAACCCCGATGGCAAACACCGGGGG
CGGGAAGAGGGGGGGGGTCTTTCTAGCGAGCAGGGCTAGACTCACCCTCA
AGGGACCGATACCTTCCTGCTGCGGCGCAGCCGCCGCGATGCGTGCGTAG
TGGTGGAGTTGGGTCGGCACTGGTGCGTCAGGTACAAAGGTGCAGATGCG
TTGGCCTCCAGGCCGTCGGTGTAGGCAGCAATGGCCATCTCATCCTTGTG
CGCGGAGGCAGACGTCACCAGAAAGGTGGACGGGCACTATGTACACGGCC
CTAGGTTTGCTAGAGGGAGCTGTACTGTCTCAGTAACCTGGTTTTGCCAT
CAAAGGAGGAGGGGATAGGTGGTGACGAGCTGATTGGGCTGGTTGACCCT
TCGGCGCGAGAATTTTCAGACCGAGAACCCGAAGTGCGACGAGGGAGAAA
GCGAGGAACCGACTGGGAAGGACAACAACGAGAGCGTGTACGAAGCGGAG
CGGGTCGAGTTTGGTCGTGCTAGGACTGGCCACAGCGGCACCGGAGCAGC
GGCACCGGAGCAGCGGAACCGGAGCAGGCGGACGGCATCGAACCGTGGCG
TACGGACAAACATCTCTTGTGTTGTCAATTATTTTTCCGTTTTTTTCCTC
AACAGGTGTTGAGTGTGTGTGATGACGTCACTGGTTTTGTAGAGAGACGC
GGCAGAGATGGCGCGGATAACCCGGGTGCCTTAATTGTGTACCTGCATCG
TGGAAGACCNCTCTTGTGTTGTCAATTATTTTTCCGTTTTTTTCCTCAAC
AGGTGTTGAGTGTGTGTGATGACGTCACTGGTTTTGTAGAGAGACGCGGC
AGAGATGGCGCGGATAACCCGGGTGCTTCTAATTGTGTACCTGCATCGTG
GAAGACCCCTTCAATGTGGAACGATTCCTAGTCAGTGTCGATGTTTACGC
TGCTGTGCCTAACACAGATGATCTGGATAGGTTCGGGTGATTGTCAGTTG
CAATGATGGCTTTGGTCGGGTGTTCTTTTTCATTGTATGTCCACGGACTC
ATTCTGACAGCACTTCAGACAGCAGCTGCATGCTCCGAGCTTGTGTACCA
TGCACCATGGTGTTATTATTGTACAGACAGCACTTCAGACAGCAGTACGC
TGTAGCCGACAAACATTCATTTTGATTAAATGCGGGACAAGGGGGGTGAT
GCTGCTGCTATAGTCGATTGGTAGTGTGTGGGCCTGTAGTTCAGTTGTGA
GCATGCAAACGTGCTGCAGGGATGGTAGGTGTACCTCCTCGGGCTTGCGT
ACCCTTTTCTTGCTAATAGTGTGTGTGCTCTTCAGATGTTTTGATGGGTG
TGGCATTTTTGTGACCACGGACCGAGTATTTTGCTAGATTTTGGGATTAG
CAACTGACACGAGTTTAATGAGAAGAAAAACAACAACAACAACCACCTTC
GACACTCCGATCACTGCTCTGCACCATCTCCTGTACGGCCGAGTGGTGTT
ATGGGCAGTGTTCGGTTGTATTTGGGCGTGCACGGCTGCTGAACTGATCT
GAGCTGAATATCGTTGAAGTCTGACCTGCCTGGATCTGAGTGCACAGCGT
TAGCCGCCAAACACCACCCGCGCGCTACCGAGGAGGGTAAACGAGGGTAT
CGACCCTTGACTTTGTGGAGCTTGAAGATTTGCGTCCGCTTAGCGTACAT
CCGCAGAGAAATCTGAAGTGGGAAATAGGCTGTTGGTACGTGTTTTCCCG
CCATTTTGGCAATTCTGCCGCTTGCCATATGCGGACGAACCACGCATGGT
AGGGTCAGTACTTGCGGTGGCCCGCCTGTGTGTTTCGCCTGTTACATGTA
TAGGCCAGGTTGCAGCGACGGACCTCGAGATCATGGAAGCACGTTGGTAC
TGGGCCTTTCTGGTCGACAATTGCCAGTGGAGTGCCGAAGTTGGCGAGGC
ATGGGTGCACAGCCGAGATTTGCGGAGGGACCCGCTCACAGTTGGCGAGT
GTTTGTGCACTCCTGTGGACTGTGTGTTCAACATGTTTTCCATGTTTCGC
TTGCAGTCGACGAAGAACGAGAAGGGCTCATGGGATACGGTAGTGAGGGG
CCAGTCATCTCCGATGGGCCGTTACCCGTCGACAAGAACACAGGTGAGAC
ATGGTGCAGACGAGCTTGCTGTGGTGTACAACTCCTGGCTTTGGGTGTAG
ATATCTTTCTGAGTTTCAGTGTACAATTTCACCTCAGCCTGCGCGCTGTT
GTCGGCAGCTGCTGTAGCGAACGTGTATGTAATAGCGTTATGATCAACCC
GTGCTCGTAGCACCGACGGAGAGTTTCACGCTGGCATGTGCATACGTGCT
TATGCCGTTGTTTGACAAAGCTTTGAATAACCACGAAGACAGATACATAC
TGCTGTGTGGCTGGCCAGTGGGTGTAGTCGGCTTTGAAGGGTCAACGCTG
GATCACCACGCCTTCAGTTTCGCTAAAAGTTGACCCCGGCTCGGCCTGTT
GTGTGGTCATTTCAATTAAAAAGATGCGTACACAAACTTAAACACGACTG
GTTTTCGTTTCAGATAGTACCCCACTTGGAAGTGTGTGTATCTCGTTCAG
TGCATTGGGAAAGGCACATGCTGACCTGCTCGACGCTGGTTTTGTTTTTT
GCTTTGGGTACTCGGAGTCACTGTCGGTGTTGCCTCGAACAGTTTTATTC
ACACCCATTGTAGTCGTTTTTTGCTGTGCATGTTTTCATGATGCGCTCAT
TCGGGAACACAAGCATATCCTAGTTCTTTCCTACCTTTCATGCGTGCTAC
CTCAGCCTTTTATGTGTAGGTGTAAATTATTTGTTGCACTTTTAGGATCT
TTGTTTTTCGTATGCATTACTTCTGGCATGCCTATTCGAAGTCGAAGTCT
ATGGCTACACAAGTACGTGAACGGCATGCAGTATCACTGGACTGGAGACA
TCACCCGTCCTCCCTCTGCTGTGTCATTTCGCGCAGGTGCAAGCTCTTCG
CTCGCATGTCAGCTTGGAGGGTGGGGTGCTGGATGCGTGCGGAGCGGCTA
GTGGTACCCTGTCCAGGGTCCTGAAAGATACTGGGCTTCATGTATCTACC
AACGACCTCAATTGCAAGTGAGTAGCGTCAAGTAGCTGCACTTAATTGGG
AATGGCATTTGGGTTTGAGCTAGCGTTGACAGTTGACGTGCTGCCTCCAT
CACAACAAATCCCCCTCGACCATTTGCGGTGGCGCACCTGTAGAACTGCA
TCACGGCAAGGGTACTCATAGTCGTGCATGCCGTAGTCGTTAGACCATTG
ACCTCGCATCCCTACAAAGCCGGGACGGAGCACGCCGGGTTCTCACCGGA
CCAGGCTCTCACATCACCAAGCGCGAAGCGCCGTGAGATATTCGGCGAGT
CGCATGAAGGGTGCGCTGCATCCTGCTAAGGGTGTTCGGCATCTTGTGCT
TACTTCCTTGCGTACGGATGACAGCTGCGTATGAATTAATATATTTTCTG
GTCCTTTCACTTCCTGAGACAGTTGTAAGCACTGTGTAACTACCTCGAGG
GTGCTTGACCATTTTAACACAACGTGGTGCAATCATCCCCCTCGCGCGGA
GTTAGGGTTCTCCACCCAGCAGAACATGATCTACTCGACCACCATTATGG
TTACCGCCAAAAAAAAAGAAATAAAAAAAAAAACGGTAACCTGGTTGCCG
AGTTCACGAAGTGAATTGGCTTGTTTTACAACGCCGTTGCCAAGCGACGA
AAACCCAACCCCGATGGCAAACACCGGAGAGGGGGGGGCAAAAGAAACTG
TGATATAATTCATTGAGTCAATGACATGTGCGTGACTCAAAAACCTCAAT
AATACTTCGCAGATACATTCCATGAAAAGTCGCTTGCCCGTCTCGCGGGA
GGATGGCGGTTTCGGCGGAAAGCAGAGCATGGTGCAAGACGTAAACCCCC
CCCCGTGTTGAAACGCGTCCTCCTTGTCTATTTTCTGGCTGTCAGATTAA
CGGCGGACACCCACGTTGACGCGGCTTCGGAGGAGTTCAAGGCGGTGTTT
AGCGAGGACGGGCGGAGGCCTGGCTGGATTGTCCCAAGCCCCCCGTATGG
CAACGCATTTTGCATCTTGGCACAGGCGCTACTGGTTGCACATGTGGGTG
TAGCGTTTAAGCTTGGGCTTTTTCTCTTGGAGCCCACGAAAACGCGCGGA
ATGGCTAAAAGATATCCCGCCAAGCGCAATAGTGGTTCTGCCCCGCGCGA
CGTACCGTGGGCGTCAGTGTTGTTTCACAGAGGCGTGGTTTGTTTGGCGT
CGTGAGGTAGGCGACGACCAACCCGCCAGACAGGCGTTTCTTTTTTGCTG
GGGGCTACTGAACCGGGGGTCTGCTCGTGTTGCTGATGTGTGGGTGCGTG
CTGAGGACTGGTTCCCACTTGGTAGGTACCGTTCGTCGGCAGTATCTCCC
CAACCCCCTGCCCCCCTCCTACAAGGGCAAGTATATTTTGTTTTGTTTTT
TTGTGCGAAAGAAAAAGCTTCCCCAGTTGCCCTTCTTCGGTTTCTTAGAG
ACACTGTCGAAGGAACTTTTTTGGCCCAAGAACGTGGGTTAGGTCAGCGA
CGTGTGTGTGTATGTATAACCGGGTGGCGGCCCAATAATGAATTGCGCGC
GGTGGAGTGGCAGCACAAACGCAACAGTTTTTCCGTGGATTTTCCGCCCG
AGATGTCAGTGTGTTGGTATGTTTTTTTTGTTGCGCCCATATACCTATGA
GAACGCAACGGGGTGCTTGTGATGCCAAACCATGTGTAGGAGTTACACGG
GTCTGTCTCGAGAGATCCCTCGGTACGTGTGTGTGCCATAGTCGGGTGGG
CTGCCTGGTGAAGGCTTACGGAACATGCAAAATATGACTTC back to topCoding sequence (CDS) from alignment at Scaffold_630:1228040..1236180- >EsuBft342_7a-0001 ID=EsuBft342_7a-0001|Name=EsuBft342_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=129bp|location=Sequence derived from alignment at Scaffold_630:1228040..1236180- (Ectocarpus subulatus male Bft15b) ATGGGATACGGTAGTGAGGGGCCAGTCATCTCCGATGGGCCGTTACCCGT CGACAAGAACACAGGTGCAAGCTCTTCGCTCGCATGTCAGCTTGGAGGGT GGGGTGCTGGATGCGTGCGGAGCGGCTAG back to top
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