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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
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| Seed ortholog | 2880.D7FZI9 |
| ProteomeId | EsuBft329_21 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 29 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.45e-40 |
| EggNOG OGs | KOG1166@1|root,KOG1166@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K02178 |
| KEGG Pathway | ko04110,ko04111,ko04113,ko04114,ko04914,map04110,map04111,map04113,map04114,map04914 |
| EC | 2.7.11.1 |
| Description | meiotic sister chromatid cohesion, centromeric |
| COG category | S |
| BRITE | ko00000,ko00001,ko01000,ko01001,ko03036 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft329_21a-0001 ID=EsuBft329_21a-0001|Name=EsuBft329_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=291bp|location=Sequence derived from alignment at Scaffold_604:28076..30778- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGGGTGGGCTGGGCACTGTACGCAGAAAATGCGGGGAACTACCCCATGGC
TGAGAAGCTGTACGTTAAGGGCATCGAGCACCGTAGGGCAGAGCCGTTGG
ACGTGCTCAAGAAGAGACAGGCTCACTTCATGCGCCGCATGCGTCGGCAC
TGGATTAACAGTCAGATCGAGGAGGGCACAGCGGAGGACCAAGCGAGGGA
GCTTCCGGGGGACGAGGAGGCTCGCAGGGGTATCCTACGTTCCCTCTCGG
TTACGGCTATAGAGCGCAACCGGCGCGAACAGGGCGGTTGA back to topprotein sequence of EsuBft329_21a-0001 >EsuBft329_21 ID=EsuBft329_21|Name=EsuBft329_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=81bp
MAEKLYVKGIEHRRAEPLDVLKKRQAHFMRRMRRHWINSQIEEGTAEDQA
RELPGDEEARRGILRSLSVTAIERNRREQGG back to topmRNA from alignment at Scaffold_604:28076..30778- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft329_21a-0001 ID=EsuBft329_21a-0001|Name=EsuBft329_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2703bp|location=Sequence derived from alignment at Scaffold_604:28076..30778- (Ectocarpus subulatus male Bft15b)
TGGGTGGGCTGGGCACTGTACGCAGAAAATGCGGGGAACTACCCCATGGC
TGAGAAGTGAGTTTGGAACGCGTCTTGTCCCGCAGAGCCCCGACGAACGC
TAAAAGTGCTCGTTTGTACTGTATCCTCCTCGACTCAGAGAGAAAACAAG
TTTGTGGGGATTTCAGTGGTGATCCTGATTCATTACGAAATTTACCGCGA
AGTGAAGTATTTTCCTGGGTGACTTTGGCCCTGTGCGCGGAAAACGCGGG
GAATTATCCCATGGCTGAGAAGTGAGTTTGGGATGCGTCGTGTCCCGCAG
AGACCCGACGAAAGCTACAAATGCTCGTTGGTATCCTGCTCAGCCGACTA
AATAAGCTTGTGGGGATTTCAGGAGTCGTTCTGGTTCCTAACGAAATTTT
CCGTGAAGTAAAGTTTTGTTCCGGGTGGGCTGGACCCGTACGCGGAAAAT
GGGGGAAAACATCCCATGGCCGAGAAGGGAGTGTTGCGGAAGCCCGCCTC
GTACTTCTTTACATGCGGAAAAGACACTACGGTGGTGGTGGTCCAGGAAT
GCTGCCGGTAGAGCCGCGTGGTGCAGGAGGAATATTCAAGTTGTTTCATA
CTCTGAACAATGCCGGTTGTCCCCCGCTTCAGTGCCGGTGATATCGGCCG
GATCGCACCGGCATGTATGTCGGGACCACTCCTGTCCTCTGCATCCCAAC
AAAAATATCAGGATGGAAATAACAAACCCATGGTCCCGGCGCCCCAGCTT
TAGCAACTACTAGAGTGATATAAGTAGGTTTTACCGTAGAATTCCTACGC
GGAGCACCTCCTGTTCTTGTGGTGGCATTATATGTCGGGACCACTCCTGT
CCTCTGCATCCCAACAAAAATATCAGGATGGAAATAACAAACCCATGGTC
CCGGCGCCCCAGCTTTAGCAACTACTAGAGTGATAAAAGTAGGTTTTACT
GTAGAATTCCTACGCGGAGCCCCTCCTGTTCTTGTGGTTAAGTTCCAAAG
CTTTTCCGCCCGATGATAGTGAAATGTCAACTCTCAGGTTCTTACCCTCA
AATTGTTGTAAGTGGTGGACATTACCATGCCCCCTCCCCCGCCCCCCTCG
ACACCTATGTCCCGGTGTCCCCACTCAATATTCTCCTTCGCGCTTCCCTT
GTGGTGCTGGTCCGCAGGCTGTACGTTAAGGGCATCGAGCACCGTAGGGC
AGAGCCGTTGGACGTGCTCAAGAAGAGACAGGCTCACTTCATGCGCCGCA
TGCGTCGGCACTGGATTAACAGTCAGATCGAGGTTCGTACGGCTGTCTCT
CATCTTTTCGTGCTCTTTTTGAATCATCGTTGCCGTTGTTGTTGTTTTTG
TTGTTGTTGCTGCTGCTGTTGTTGTTGTTGTTGTTGTTGTTGTTGACGTG
ATTGCTGTTGGCGAAATAATCTCATTGTCTTGTGGGTGCGGTTGCCATTA
AGGTTGGATTCACCTTGTTAAGGTCTGCGGCATGTATTCTTACGTCGTCA
TCATTGTTGTGCTTACTGCTGCTGTTGTTTTTGTTGTATTAACATGATTG
AGGTCTGTAGATATGTACATGTCTCGCGTTTTTTCTTTCATCCACACTTT
GGTCCTCGACGCGAGCTCTCGGTTTTTCCTTTTTTTTCTTGGGGATGGCA
TGCGTACACGAGTACAGGAAGCAATTGAAACGGCTCGCCTGACGTTTCTG
CGTTTCTTTGAAGCCCTCCATCCACTCTTGTTTTTCTCTCCCCTCCCCTT
TGTCTTGTTCCTTCGTTGACTGGGGGTGGAAATACCAAATTTGATGAGAT
GAAACCATTAGGAAAGCACAATGGTAGGGTTTCGTGTCCTTCCCCTGTTT
GTTTTTTTTTCACTCGTACTCTTGTTTTTTCTCCCCCTTCTCTTGTTTGT
TTTTCTTTGTTGATTGGAGGTGGAAATACCAACTTTGATGAAATGAAATC
ATTAGGAAAGCACAATGGTAGGATTTCGTGTCCTTCCCCTGTTTTTTTTT
TTTTTCACTCGTACTCTTGTTTATTTCTCCCCCTTCTCTTGCTTTTTTTT
CTTTGTTGATTGGAGATGGAACGCCAACTTTTTCATCAAAATAGCAAGCA
CCGTCAGTAGGGCACAGCGGAAAATTTCGTTGTTTTCGCCTTTTTTTTTT
TTTTTCCACCCCCCACTCTTGTTTTTTCCACCCCCCGCTTTTTTTTTGTT
TTTGCTTTTTTCTTAGTTGATTCGGGGTGGAATGCCAAATTTCATCTGTT
AAAATCACTGGGAGGGCACGGCGGAAGATTTTGTCTTGTATGGCTTTTTT
TCTTTCAATCCCACTCGTGTTTTGTCCCCCGGCTCTTTATTTTTTGTTTT
GTTTCATGTTTAATCGGGGTGGAATGCCAAATTTCGTTTAATGAATCGTT
AGGAGGGCACAGCGGAGGACCAAGCGAGGGAGCTTCCGGGGGACGAGGAG
GCTCGCAGGGGTATCCTACGTTCCCTCTCGGTTACGGCTATAGAGCGCAA
CCGGCGCGAACAGGTGTGTATTATGTCGTATGTTTTTTTGTATGTAGCAT
CGACCGCGCTAACCGGCCGACCATCGACAAGGCGTCAGTGTCATGCTGAC
CATTGTCAAGACGCCACTCTCGGTGTGTGTTCCTTTTGTTTGCATCGACC
ACGCTACCTAACGGCTGGCCAATGAGAGAGGGCACCATCCCCAGGGCGGT
TGA back to topCoding sequence (CDS) from alignment at Scaffold_604:28076..30778- >EsuBft329_21a-0001 ID=EsuBft329_21a-0001|Name=EsuBft329_21a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=246bp|location=Sequence derived from alignment at Scaffold_604:28076..30778- (Ectocarpus subulatus male Bft15b)
ATGGCTGAGAAGCTGTACGTTAAGGGCATCGAGCACCGTAGGGCAGAGCC
GTTGGACGTGCTCAAGAAGAGACAGGCTCACTTCATGCGCCGCATGCGTC
GGCACTGGATTAACAGTCAGATCGAGGAGGGCACAGCGGAGGACCAAGCG
AGGGAGCTTCCGGGGGACGAGGAGGCTCGCAGGGGTATCCTACGTTCCCT
CTCGGTTACGGCTATAGAGCGCAACCGGCGCGAACAGGGCGGTTGA back to top
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