Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft329_13 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 201 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft329_13a-0001 ID=EsuBft329_13a-0001|Name=EsuBft329_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2012bp|location=Sequence derived from alignment at Scaffold_604:154640..160531- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAAGACGAGCAGCCGTCCAGCGATTCGGATGAACTGCCCGCTCCGAA
GGGGAAGCCGCGAGATCGGAAGGCGAGGGAGAAGGTAAAACTTGCGATGT
ACAAGATTGTGAACAACGACGCCGGGAATCCCGTGGATATGTTGATTGCT
GCCAGCGATCGCGTTGATGACTTGGAAGAGAAGTTGGAAAATGCGAAAGA
AGCAGAAGCAAAAATTACAAGGATCACTCAAAACCTCTCAGTAGCGCGGG
AGGCGTACGAAAAAATCTACAAAAAGACCAGGCCTGCTGCAGAGAAAGCG
GCGGAGGAAGAGGAGGAAGAAGAGGAAGAGAGTGAGGTTTCGTAGCGATA
TCTCGTGAAGGCCCTTCGGACGAACCAAACCTGACTTCTTCCAACGACGC
ATGAAGAGGATGTCTTGTCGTTTCGGATTTGATTCACACGGCATAGGTTG
GGTACATGCATTTTTTTGAGTATGGCTAGTTTTTTTTCCGTTGTGTGCAT
CACGAAGGTAGGGCACTGCTCGTATGTTCTTTGAGTGTGGACGGCGCATG
GCGTGATCCACCCCTCCAGCATGTCTTTCTTCTTTCGGTTTCGGCGGGGG
AACATTAGAAGTTTGTTGTTCAGTGAGGGACCAGGGTCTTCTCTGTCGGG
CGTTTATGTGCAGGCGTACGCATTTTTGGCTGCCGGAGAGCTGAGCCCAG
AGACCAGAGACATTGGTTCGGAGGGTATTTCATTTTTGTCACTTAGCTTC
GAAAATATGATATGGGATTTGAATGTGTAGGAAAGTACAAACAGTAGTGC
GGGCTAGTAAGCCCGGAGGAAAGTGCGGGAGATGCAACTCCCCACGGAAG
GAAAAAACAGGGGACAGGATCTAGTAGCCCCTGCTTGAGCAGCTGATGCT
GGCCCTATCCTTGACAGAGTCCTTTACCTTCCCTTGGCAACAGCTACTGC
TGTTCCACACGAGTTAATAACAAGACGCCGCTGATGCGGCCAACGGGTCT
CGGCCCGACCTCCACGATGTGGTGAGCTGCCTCCTCGTGGCGATGCGGGC
GGCCACCATGAACGCCACGTCTCCGGTGGTGTGGCCCGGCTGCGCCGTGG
CGACTCCGGCATCTCCGGCGTTCCAGCAGCCCAAGGCCGGCCGCGTCAAG
GCCACGCCGGTCGAGCCCATCGTGCGAGAGAGTAGCTCAGGCGAGGACTC
GGGCTGGAGTTCCGCGGGAGCCTCTCGCCCCCCCCGGAGCCATCTTCATT
GGCGGGCAATGGCCGGGCACGGCAGTAGGCCAAGCGTCACACGAGCTGGA
CTCGTGGCAAGGGAGGCGGATCGGGCTCTGGTTCAGACCGGAGTCTCACC
CGGAAGCACGGCGCTCCGAAGGGTCCTTCTCCCAGGCAACAAGTGAAACG
GAGCTTGGATGGAGGAGCCCCTGGACCAGACGCTTTCCAGCTATTGTCGC
GTCACCTGGCGGAGCAATTTGACGTCGGAGACCGCCAATAGTCGTTTTTG
CGGCTGCAACAATTTGGCGTAGCAGATGGTACTCCTTTTGCGGATTATCT
TCGGGCTTTCCGTTTGTTAGTTTCGTCTGTGACTGGCTCTGAGCGTACTT
TGGCCCCTAGTGTATCCATGGTTCTCGAAATAGTGCGAAGCTCGGTCGAC
AAGCAATTTCCGAGTCTGTCTCCGCTTTTGTACCCGGGTGTTTTGTCCAC
TGCGGTCACTCCCTTTGAGTCGATTGCGGTAATGTGGGAGGCGTTCGCGC
CTTTGGCGACTAGTAAAACCCCGGCTATCTGTGGTTCAACTTATTTTCGT
TGACCTCGACCCGTGACTCTCTGCAGCCTCGGCGGCCTAACCACCGCGCC
CCTGCGTCTTCGGGCCAGTGGGCATCCGGCTTCGCACAGAACCCTGTAGT
TTTGCCCGTGCAACCTCAAGCCACGGATCCTTTCACGCACAACTACGACT
CGCGGCCTGCTTCGCAAGCCGACTGGTCTGATGTATACGCCCTCACCGCC
AATTTTCGTAAC back to topprotein sequence of EsuBft329_13a-0001 >EsuBft329_13 ID=EsuBft329_13|Name=EsuBft329_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=114bp
MEDEQPSSDSDELPAPKGKPRDRKAREKVKLAMYKIVNNDAGNPVDMLIA
ASDRVDDLEEKLENAKEAEAKITRITQNLSVAREAYEKIYKKTRPAAEKA
AEEEEEEEEESEVS back to topmRNA from alignment at Scaffold_604:154640..160531- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft329_13a-0001 ID=EsuBft329_13a-0001|Name=EsuBft329_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5892bp|location=Sequence derived from alignment at Scaffold_604:154640..160531- (Ectocarpus subulatus male Bft15b)
ATGGAAGACGAGCAGCCGTCCAGCGATTCGGATGAACTGCCCGCTCCGAA
GGGGAAGCCGCGAGATCGGAAGGCGAGGGAGAAGGTAAAACTTGCGATGT
ACAAGATTGTGAACAACGACGCCGGGAATCCCGTGGATATGTTGATTGCT
GCCAGCGATCGCGTTGATGACTTGGAAGAGAAGTTGGAAAATGCGAAAGA
AGCAGAAGCAAAAATTACAAGGATCACTCAAAACCTCTCAGTAGCGCGGG
AGGCGTACGAAAAAATCTACAAAAAGACCAGGCCTGCTGCAGAGAAAGCG
GCGGAGGAAGAGGAGGAAGAAGAGGAAGAGAGTGAGGTTTCGTAGCGATA
TCTCGTGAAGGCCCTTCGGACGAACCAAACCTGACTTCTTCCAACGACGC
ATGAAGAGGATGTCTTGTCGTTTCGGATTTGATTCACACGGCATAGGTTG
GGTACATGCATTTTTTTGAGTATGGCTAGTTTTTTTTCCGTTGTGTGCAT
CACGAAGGTAGGGCACTGCTCGTATGTTCTTTGAGTGTGGACGGCGCATG
GCGTGATCCACCCCTCCAGCATGTCTTTCTTCTTTCGGTTTCGGCGGGGG
AACATTAGAAGTTTGTTGTTCAGTGAGGGACCAGGGTCTTCTCTGTCGGG
CGTTTATGTGCAGGCGTACGCATTTTTGGCTGCCGGAGAGCTGAGCCCAG
AGACCAGAGACATTGGTTCGGAGGGTATTTCATTTTTGTCACTTAGCTTC
GAAAATATGATATGGGATTTGAATGTGTAGGAAAGTACAAACAGTAGTGC
GGGCTAGTAAGCCCGGAGGAAAGTGCGGGAGATGCAACTCCCCACGGAAG
GAAAAAACAGGGGACAGGATCTAGTAGCCCCTGCTTGAGCAGCTGATGCT
GGCCCTATCCTTGACAGAGTCCTTTACCTTCCCTTGGCAACAGCTACTGC
TGTTCCACACGAGTTAATAACAAGTGAGTTCGTCTTCACGAGTGTCCCAG
ATTGCACCGCGCGTGCATATCCTTTACATTTGGCGTTGTCGGCATAAACG
TACAGCGTGCTTTCTGGGGTTTGTGTTTGGGCGACTCGAACCTGCTGCAC
GCAGCTTCCTTCGCTTTCGTCTCCACACAATTTAGCTTTGCCTCGCTGAT
CGGTATGTCTCACTTAGCGTCGGCTCCTCGGACCCGGCTTCGGCCAGTCC
AGAGCCCTCAGAGTGTTCTCGCTCGCAGGTGTCTCCACACAGTGCTTCGG
CTTTCGGGCCGACAGCCGACGATTCCCAATCGTCGTTGTTGCCGTCTTTT
GATGGCGCGAGTGCTGCTGACCCCATCGCAGAAGCCACCCGTTTGTCAGA
GCTTCGCGCTCAACGCCGACGGGAGGAGTTCGCCTCCACGGCTTCTACTG
ACGCTAACCCCGTGGGTGCTGTCCTCAAATTGCCTGCACCCACAGCAGAA
GCTTCGGTTTCCACCTCTGTCCTTTCGAGTACCCAGCCTTCTGTTTTTAC
AGCCGCTGGTGGTGTGTCCCAAGTTTTCCCGCCGGAACCACATGTTGCTT
ATTCCTTATTCCACTTTTCCCCTCACCTCCACCGCCGCTGAGCCTTCTGC
TGTTCGGNCATTGCCTGCACCCACAGCAGAAGCTTCGGTTTCCACCTCCG
TCCTTTCGAGTACCCAGCCTTCTGTTTTTACAGCCGCTGGTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCAAGTTTTCCCGCCGGA
ACCACATGTTGCTGATTCCACTTTTCCCCTCACCTCCACCGCCGCTGAGC
CTTCTGCTGTTCGGGCAGACATTGGCTTTGACAATACTGGCTCTGTAGTG
CCACGCTTGCCTCATGGCTCTGTTGTTGGCCGCGCACTGCATTTCGATTC
CACCGTGCCGGCCATTGCTCCTTTTTCGTCGCGTAGCAGTCGCACACAAG
CCGCCGCTGGTGCCCAACGGCTTTTTGACCGTCGTGCATCCGTTTCAGTG
GCATCAGTGCCTTTGGATTTGACTGCTTCACATGCATCTGTTCCGGTGGT
TTCGACTGCCTTTGCGGTTCCGACCGCTTCCAATGCAACCGTCTCAGTAG
TTTCGACTGCCCCCGTTGCATCTGCTCCTGTCGTTTCGACTGCCGTGGCT
GCTTCCCTTGGTCGTGATGCACCTGTTTCTATAGTTTCGACTACTTCAAC
TGCATTTTGTTGCTGCCTTGCAATTTCTACGCTCCTGACCATGATGGTTG
TATATGCCCTCTTCCCCGCCTGTAGCAATCCAGTGGCTGACCCTCTCATG
ACCTTGGCCCGCCCGTCTGAGCTTCGTGCTGCACGCCGGCGAGAGAGGTT
CGCCTCAGCGTGTCTCTGCTCGATTCTACCTCTGCACACATCTGTCTCGT
TAGGGGACTTCGGTTCCAGACACACCAACAGTTGTTGAGCCCCGGCTTTC
CGCTGAAGCCGCTGCCGTCGTTTGAGCTTCGGTTCGTTTGCTACAGCAGT
ACAGTACCTTGGCTGTTGAGCTTCGGCTCTTTTGCCAGGTTCGGTTTGTT
TGACAGCTTCGACTGTTGAGCTTGGCTCTCTTCTCAGCTCCAGCTGTTTT
TTTTTTTCTCGCCTTCGTGGCGTTTGATGCTTTTGTTATTCGTATATCTA
CTTGCAGCGTTTTCTTTTCCCCCGCGGTTGTTGAGCGAAACTTGGCGTTG
ACGCTCCGTCGATCATGCAAGTAGCAGTATCTCTTGTCGCCGCACTCACC
TTCCGGGGTGAGCACCGTACAGCTCTGCTGCTGGCTGTGTGGGTATTCCT
TCTCTTTCCTTCCCCAACAAATTCCGTTTTTGGACCAAATTATTGAGTGG
GTGGTGTATCCCATGGTATTTCTTTTACATTCGTCGTAAGTGCGTAACCA
CATTATATGCATTAAATATCAAGAGTAGTCGAAGCTAACCGGTTGATTAT
GACTTCGATCACCCAAACCGGACACGTGATGTAGCTTCGGCTCACACCGT
CTGTGTCTGCAGTTTCCACTGCTCGCAAACGGCACTAACCGGCTGTGTAT
GGCTTATTGTATGACTTCGGTCACCCACCCCACTGGACACGTGCTGTAGC
TTCGGCTCACGCCTGTGACAGCAGTTTCGACTGCTCGCCGTGCTCACACC
GCGGTTTCCATGCCACTAGTTTAGACTATGCCCGCAGTTTCGATAGCCCG
CCGTGCTCGCACCGCGGTTTCCTTACCTGTTGTTTCGACAACCAACCCCA
ATGCTAGTTGCTGCTTCGGCGTTTCTAGCTGTAACCTCGATTACTGCTGC
AGTCTCGACTGAAACCTGCTATTTCGCTACCTGCCGTCGGCTGCCTCAAT
ACAGGACGCCGCTGATGCGGCCAACGGGTCTCGGCCCGACCTCCACGATG
TGGTGAGCTGCCTCCTCGTGGCGATGCGGGCGGCCACCATGAACGCCACG
TCTCCGGTGGTGTGGCCCGGCTGCGCCGTGGCGACTCCGGCATCTCCGGC
GTTCCAGCAGCCCAAGGCCGGCCGCGTCAAGGCCACGCCGGTCGAGCCCA
TCGTGCGAGAGAGTAGCTCAGGCGAGGACTCGGGCTGGAGTTCCGCGGGA
GCCTCTCGCCCCCCCCGGAGCCATCTTCATTGGCGGGCAATGGCCGGGCA
CGGCAGTAGGCCAAGCGTCACACGAGCTGGACTCGTGGCAAGGGAGGCGG
ATCGGGCTCTGGTTCAGACCGGAGTCTCACCCGGAAGCACGGCGCTCCGA
AGGGTCCTTCTCCCAGGCAAGTAGTCCCGTCCCTTATGGATGCGACTTTG
AGTGATCGTTTTGATGATGTTTTTTCACAGGCTTCGCCCCCCCCCTCGAC
TTCGGTTGTTGGTATGGTTTCGGCCCCCTCTGTTTCCTCGGACTCAGGGC
GTTTGCGTCGTGTTGCGTTTTCGGACCTTCCCCCGCCTTCAGATTCCCCT
GTTTCTTTGGAACCCTTTGCACCTTCTGTCCGTTCTGCCGCATTCAATGN
TCACACGAGCTGGACTCGTGGCAAGGGAGGCGGATCGGGCTCTGGTTCAG
ACCGGAGTCTCACCCGGAAGCACGGCGCTCCGAAGGGTCCTTCTCCCAGG
CAAGTAGTCCCGTCCCTTATGGATGCGACTTTGAGTGATCGTTTTGATGA
TGTTTTTTCACAGGCTTCGCCCCCCCCCTCGACTTCGGTTGTTGGTATGG
TTTCGGCCCCCTCTGTTTCCTCGGACTCAGGGCGTTTGCGTCGTGTTGCG
TTTTCGGACCTTCCCCCGCCTTCAGATTCCCCTGTTTCTTTGGAACCCTT
TGCACCTTCTGTCCGTTCTGCCGCATTCAATGCTGCAGACTCCGGACATG
TACTTCGCGTTGAGTTTTCGAACTTAGCCCCGGTTTCGACCACCCCTGTT
CCTTCGGAACCCTATGCACATTCTGTCTGTTCTGCCGCATTCAATGCTGT
AGACTCCGGGCATGTACGTCGCGTTGAGTTTTCGAACTTAGCCCCGGCTT
CGACCGCCCCCGTTTCTTCGGAATCCTTTGCACCTTCTGTCCGTTCTGCC
GCATTCAATGCTTTAGACCCCGAACATGTACGTAGCGTTGAGTTTTCCAA
CTCACCCCCGGTTTCGACCACCCCTGTTTCTTTGGAAACCTCTGCACCCC
GTAGCCTTTCTACCGCTCGCCATGCTGTAGATCCACAAATGATGCAGAAC
CCTGGGTTTTCGAACCTCAACCCCCCTTCGGCATTCGATCCACCAGTGCC
GGGTGTTTTGGGTAGCATGTCGTCTTCAGACCATGCCCCCACAGCTGCTT
CGGTAGCCGTCGCCGCACCCCCCGCTGTCTCCGATGATCGTGCTTTGCCA
CTTTCTCCTAACACAGCACACACTCGTCAAGCATCGATCGATGCGACTGA
TGCAGCTGCTCGTAATGCTCATGTAGCTACAGTACAACGAGCGTACATCA
CCTTCAACTTGAAAAAAGTTGAGAATGTCGCTACCATGCCTTTCCCCGCT
ACTCTGTTGCCGGGAGATGGCTATCAGCAGCTTGTTCGCACAACAAGAAC
GGCTTTGTCCGATATTTTGCTGTTGTGTGATGAGCAGAGTGAAGGTTTGA
CAGGCGTCGATTTTGTGCGTGGATGGGAACGTCCTCTCGAAAAAAAACTT
TTGAGTGCGATCACTCCCGACAAGCCCTCTACCGCCGATCTCGTCCTTGC
CCTTACTGATTTCTTTCAGCAAGTGAAACGGAGCTTGGATGGAGGAGCCC
CTGGACCAGACGCTTTCCAGCTATTGTCGCGTCACCTGGCGGAGCAATTT
GACGTCGGAGACCGCCAATAGTCGTTTTTGCGGCTGCAACAATTTGGCGT
AGCAGATGGTACTCCTTTTGCGGATTATCTTCGGGCTTTCCGTTTGTTAG
TTTCGTCTGTGACTGGCTCTGAGCGTACTTTGGCCCCTAGTGTATCCATG
GTTCTCGAAATAGTGCGAAGCTCGGTCGACAAGCAATTTCCGAGTCTGTC
TCCGCTTTTGTACCCGGGTGTTTTGTCCACTGCGGTCACTCCCTTTGAGT
CGATTGCGGTAATGTGGGAGGCGTTCGCGCCTTTGGCGACTAGTAAAACC
CCGGCTATCTGTGGTTCAACTTATTTTCGTTGACCTCGACCCGTGACTCT
CTGCAGCCTCGGCGGCCTAACCACCGCGCCCCTGCGTCTTCGGGCCAGTG
GGCATCCGGCTTCGCACAGAACCCTGTAGTTTTGCCCGTGCAACCTCAAG
CCACGGATCCTTTCACGCACAACTACGACTCGCGGCCTGCTTCGCAAGCC
GACTGGTCTGATGTATACGCCCTCACCGCCAATTTTCGTAAC back to topCoding sequence (CDS) from alignment at Scaffold_604:154640..160531- >EsuBft329_13a-0001 ID=EsuBft329_13a-0001|Name=EsuBft329_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=345bp|location=Sequence derived from alignment at Scaffold_604:154640..160531- (Ectocarpus subulatus male Bft15b)
ATGGAAGACGAGCAGCCGTCCAGCGATTCGGATGAACTGCCCGCTCCGAA
GGGGAAGCCGCGAGATCGGAAGGCGAGGGAGAAGGTAAAACTTGCGATGT
ACAAGATTGTGAACAACGACGCCGGGAATCCCGTGGATATGTTGATTGCT
GCCAGCGATCGCGTTGATGACTTGGAAGAGAAGTTGGAAAATGCGAAAGA
AGCAGAAGCAAAAATTACAAGGATCACTCAAAACCTCTCAGTAGCGCGGG
AGGCGTACGAAAAAATCTACAAAAAGACCAGGCCTGCTGCAGAGAAAGCG
GCGGAGGAAGAGGAGGAAGAAGAGGAAGAGAGTGAGGTTTCGTAG back to top
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