Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 2880.D7FNS4 |
ProteomeId | EsuBft321_3 |
Protein domains | CYTOPLASMIC_DOMAIN |
Protein domains | IPR001199 |
Protein domains | PTHR19359 |
Protein domains | TMhelix |
Protein domains | NON_CYTOPLASMIC_DOMAIN |
Protein domains | IPR018506 |
Protein domains | TRANSMEMBRANE |
Owner | apollo_admin@sb-roscoff.fr |
Note | cytoScaffold_ome b5 os:drosophila melanogaster gn:cyt-b5 pe:2 sv:1 [Automatic annotation] |
Nb exon | 4 |
Max annot lvl | 2759|Eukaryota |
Length | 2711 |
Hectar predicted targeting category | other localisation |
Evalue | 1.76e-90 |
EggNOG OGs | COG5274@1|root,KOG0537@2759|Eukaryota |
Ec32 ortholog description | Cytochrome b5-like heme/steroid binding domain |
Ec32 ortholog | Ec-01_004430.1 |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Description | heme binding |
COG category | CI |
Cross References
External references for this mRNA
Database | Accession |
GO | 0005811 |
GO | 0035206 |
GO | 0020037 |
GO | 0043085 |
GO | 0045610 |
GO | 0051726 |
GO | 0009707 |
GO | 0002168 |
GO | 0010319 |
GO | 0005743 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2711bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGCGACGGGCGCGTCACACAGAGGACTACACAAGGGTTACCGAGGCCCTG AGCAAGCACCATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGG AGGTCGCGACTCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGAC ATGAACGACGGCGACACCCCCAAGGTTTACGACGTGTCGAGCTACCTGAA CGACCACCCGGGGGGCGCGGAGGTGATGATGGAGGTGGCCGGGCAGGACG CGACTAACATGTTCGAGGACATCGGGCACTCCTCGGACGCAAGAACGGAG ATGAAGAAGTTCCAGATAGGGCTTCTCAAGCTGACAGACGAGGAGAGGGC TAAGATTGCGCAGGAGGCGGCGAAGAAGGCCGAGCGGGCGTCGCGACAAG GGGGAGGGCTCAACCCCCTCGCGGTGTTGGTTTTGCTTTTGGCCATCTCA ATCGGGTATTACTACTCCAACCAAAAGGCGTGACCAGTGACGTCATGGCT TCCTTGCGCTCGGGTTATTTGTTTTCGCCGGTGGGGTAGTTGCTCCTCCC CGCCCCTGGTATCTAAACTTCCTAGATGTGTCTCTCTAGCGAGAGCTTGA GATCGTGGGAGCGAACTAGAGTTCTGGTTACGACGCCGCGAACGGCAGCT TGGTGATTGCCGGGCGCTGTGCTTGCTTTCACGCTTTTACATGGCGTTTC GACCGTTTGCTGAAGCCGAGACACGCTGAGGAGGGCGGGGCACACGGGTG CGAATGTTCCCATTACGATTGATTGGTCGAGCCTTTCCGGCGGCTCTCGC CAGGGGTGGGAAAAGGAGGCGGGCGGAACATCGCCCTGGAAGAGAATAGC GAGCCGGTGCATGGTAGGGTTTCGTGTTCACCGTTCTGTTTACTTCGTGT CATGAGCACGAGGGGCGGCCGCAGGAGAGCCTGGGGGGGAGGGGTAAGGG GGGGGCTGTGCACCACGTCCCCCCCCCTCTACTCTCAATCGCTGCTGCTC GTGGGGTGTGGGCGATGTTGCCCTCTGCGGTTGTTTGTGAAGGAGTTTGT TGTGTTTTGTTGGTAATTCAAGAAGGTCGTTTGGTTCCACGTCATTTTCA AGACCAACCGCTTCGCCTTCGGTCTCTCGAAAAGCGTGCTTCTTTTTGCC GGCACGTGCATCAGACAATCAGCACTGACTGACGTGATGACACACCTGGG TGCGCAAGGGCAAGGGACATGTTGCGAGCACGGGCAACTACATACAACTG CCATTTCTGTCTGTAGAACTTAACCATGGTCACCGGTACACTGGTACACC ATGATCGGTACACTATTGCTGAACGACCGTCAAACTTTGATGCTCTGGTT GGGTCTAGAGACGGGCACGAAGGAAAGAAATACAAATAAGAATGGGAACT ACTCTGGGCTCTCAACCCCCACCCTCCCCTCGCACACCCTGTGAAACCTC GAAACCGCTTCGTCTGAGACAACAGCGGACACAATCAACTACAGCACGAT CAAGATCCGCTTGGCTGCGGCGTGCTGTGGGTTGCCTCTGGGGCGTCGCG TACCCCTTGCGGCCAACACAAGCGGACAACGTGCGTTCGAAACGAGCACG TTCAGATAGTTCCTACCTGCAGTTGTGACAGCAGCAGTTATTACAAATTG ATTAGATTTGCACAACTCCGCGCGATGAGGGGTGGTGGGGCAGCCTCTCG CACCTCACGCTCCGCGACGCCCCTACTCTCGTCTACTCCGAGCACCCACA CCAAGTCCAGGAAAGTTTTGGATTCCGTCGCGCTTAACAGTTATCATCCG ACTACGAGCGGAATGGAGTCGAAAAGTTGCCACACTGCTGTGCCGTCGGT GTTGTGGTCCTGGTTAATGAGCAACTCCTTCCGCGCTACCGACCCATGCA AGTAACGATCAACACAGACAGGCCCGGTCGCTCCCCTTGACTTCTAGGAG ACAACAAAGGCGGGCATTATTAGACTCCGGGAGGGGCTACCCCTTGCCTG CTGTTACAAACTAACCCAGAGAACGCCTGTGCACGGTAAACCGCACAATG GTGTACGGCCACCCCAAGATGGAGGCCTCGCGCCCTATTCACTGTCTTTC CTTCCGGCACTGGTGCCGCGGTCGCCGCCCCAGTGAGCATCACGCCCCGG TTGCCGTCGCTTTGCTGAGGGGTAGCAAGGCGGACCGGATCGACCTCGTT GGGGTTATTTTTACTGTTCCCAGCACGGGCATGTCCTTCTCCACCGCCAC CGCCGCCGCTCTTGCTAGGAGACGCAACTCGGGCGTCCTTTACTCAGGCG ACAGCCATCCATGAAAAAAGGGGTTGGGGGGGCAGGGGATGATATATTAT TGGCATATCATAGGCATTTCGGGATCCATGTGATCATGGCGCGCAGCATC GCTTTTAAGATATGAAGCATTCTCGACCACAACAGCACCAGACCTACGCC ACCCGGACCAAAACCTCAGCCCAAACATGATACTCCGTAAGACCCCAGTA TCAGCTGAGGGGGCCGAGTTGAACAGACAAATCTACAAGGGCAAGGACAC GGTTTTTTGGCGAGACTATCGACACGCCTCGTACACCGCACCACCAACGT CCCACGGTGTGCGCAGAAGAAGAAGGGTGCGCCCCCCCCGCCTACTTGCC TACCCCCAGCCCACCCTCTACCACACTAAACCGAAGTAAAAGCTTTCGCT CTTAACTTGAC back to topprotein sequence of EsuBft321_3a-0001 >EsuBft321_3 ID=EsuBft321_3|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=140bp
MADTPVVVEYSMTEVATHTTKESTWLVIKDMNDGDTPKVYDVSSYLNDHP GGAEVMMEVAGQDATNMFEDIGHSSDARTEMKKFQIGLLKLTDEERAKIA QEAAKKAERASRQGGGLNPLAVLVLLLAISIGYYYSNQKA back to topmRNA from alignment at Scaffold_235:36289..42658- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6370bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b) GGCGACGGGCGCGTCACACAGAGGACTACACAAGGGTTACCGAGGCCCTG
AGCAAGCACCATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGG
AGGTCGCGACTCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGAC
ATGAACGACGGCGGTACGTTTGTACGCGTGTTTCTCGCACTACATGTATT
CTTCGCTAGCGACTTTGTCGGTCGAACATATCCTTCATTTACCAGCAGCA
GTTATCTCTCGTATGGCAGCCTCCAGAGAGCCGAATGTAGCTGATAGCGA
TGGAGGGTTTCGTGGGTCACATACCAAACGAACCAATTGTATCAAAGCTG
AGAACCCATGCGATGGGGTGGGGCGAGGTACGAGCCATTTTGTATTTTGA
AGTGACGATACGCCCAGCGGGTCTACCAGCTGTAAGATTCTGGTTCAGCC
TGGCCTGCTGAGCTTGATTTCTCCCAGCTGGTGCTGGTGTGTGTGTTTTC
CTCCTATTGTGTACATGGCGCCAACATATAGGGTCTTCTGCTATGAAGAC
ACGCACGCACACACGACGACTCCTCACTAGCTACACCCAAGCTCGTGACA
CCTCCAATGACGGTCTTGGTGTCATGGATGATGGGTGTTGACGTGACGAA
GAACACAAATCATGACCGCATCACCATTGAGGCGGGGGGGGGGGGGGGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGG
GGGGGGCACGGGGGAACGGCTGTTGCTGTCGTGTACCGACAGCAAACAAG
CAAAGCAGACCAACGCAAGGCAGGGAGCAGTCGCTTCCAGATGCCTGCAC
AGAGCAGCAGGCCTGTCGTGTGTAGTCGAGCGCTGCGACGAAGTGTTCTG
CGCTGCCGTGCCATTTGGGTCTACTCTGCTGTTGTGCTGTACACAAGTGT
TGCGAAGTGTCGTTGATCATGTCGTTCGTACACATACAGCAGTAGACCTT
CAGGCACACTCGTATCCAGAGGCACACAGCACCAGTGAGCCAATACAATA
GCAAGGATGCATTCGAGCGGGCGGTGTACCTATGCCGCACGCTACAATAC
ACGCTACTCGGTGGAGACGTATTCGTCACTTCGAAGATTGTACGGCCGTT
GTAGCACTTAAGCAATATTTACAAAAATAGAAAACAGCGGTATGGAAATG
AGATGTCTATGCATACGGACCCCAACCAAACAGCAGGTGTCTGTCCCCTG
TATATTGTACATACAACACGTGCACACACCCGAACATGAAACTTTCGGAA
CGTGCCAAGTGCACCACAGCGGCAAGCGTCTATGGCTGTACGGCCTATGA
GAGGTTTTGTAACCACTATCCACATTCGATGCTAATGCATGCAACACCGG
TTGCGTTCCAACCGCGGCCAAGATGATCCTCGCACTTGGCGCGGAAGTTA
GTTTGTGTTACGTTCCACGGGCGCGGTCACTGAGGTCAGACCACCCCCGT
GACAGTGCAGCATAAGAACCAACAGAAGGATAGATAGGATGTTGCTTCGA
GTACATAAGTACTACAACACCCTGAGAGTTAAGTAGTTGTACGAGCGACT
CACCGCCATCGGTACCGCAACGTAAGGATCACCGGTGCGTCGCTGCAGTC
AGGAATAGTTTTGCTCTTTTTGCTCGAAATTACTGCTGCGTCGCCTTAGC
GATGGATACCTAGAATCCTTTCGGGATGAGTATTTGGGTTTTTTTCATCA
GGCATACGGCGTTGGTTTGCCTGCTTGCCTGCTGCTCTGCTTGTTCTACC
CCTAGTCTACGACAGCAGTTGGCATGCCAGGCAGAGACTCCCACAGTTGA
CGTCAACCCCCATAGCCACAACCTCTTGAGACGACCACACACGCAGAAAA
CGACAGTGATCGTCCTCGTACATCATGATTTAGAACAGAACATTTTCTAG
TCTGGCGATGCCCCCCCCCCTCCCCCCGGCCTCCCTGCCCATTGTTTTTC
GTCATCCGTGCATGTGTAACGTTGAGCGGAAAGAAGAGCATTCAGTCGCG
CCGCCGGTGTTCCAAAACACTATTGCTCCCATGTGCGGTGTCCCTTGTCT
GTCCGCCTCCATCGGCTGTTTCTCGCCTTACTCTTGCCCCGACAACAACA
ACAACGACGACGACGGCAACGGCAACGATAACCTCAGACACCCCCAAGGT
TTACGACGTGTCGAGCTACCTGAACGACCACCCGGGGGGCGCGGAGGTGA
TGATGGAGGTGGCCGGGCAGGACGCGACTAACATGTTCGAGGACATCGGG
CACTCCTCGGACGCAAGAACGGAGATGAAGAAGTTCCAGATAGGGCTTCT
CAAGGTGCGTCTGCTGCGCGTCCTGTGTACGTATGCTTGCATCGCCGTTT
CGCTTCTTCGCTGCTGTGTCGCTATAGCGTCGACCGATGTCAACGCCAAT
TGTAAGACTCCAGTCTCGGCGGGGGGACATGAAATCCCGGAACCGCCTTC
GATTTTGTCCTTTGCTCCTCTGCTGTCTCTCGCTTCTTGTTGCTTGCTGT
GCTTTTTCTCGTTTTTGTGTTTTCCTTTGCCGTGCTTGGTTGACCAACAG
TACTTATTCCTATGGACCACCTGTTGCCGATAGGTCAACCAATGCGCTAG
TCAAATCGCAACCCATTCTCAAATCGCAACCCGTGAAGGGTGCGGCCGAC
GAGGAGCACAAGGACCAGCAGGAGGAGGAGGAAGGGACCGCCCTCATCCC
TCACGAATTGCGATTTGAGAATGGGTTGCGATTTACGATGCCTTCCTCCT
TCTTGTTCTCGTGGTTGTCCTTCTGCTCGTCGTCGGCTGCATCCTTCACG
GATTGCGATTTGACTATTTAGCGCATGGATTGGCCTACCGGTAAAGGTTG
TCCATGGGAATAAGCGCTGGTGTGCTACGAGGAGAAGACTCAATACTGTC
AGGCAGCATTGCTGCTCCATCATCTCGTTCTCTCAGACGAACATCATTGT
AGCATACAGACAATCTCATCTTCGTTTCGTCCCCGTTCCGATTCGAGGTG
TGTGAGTGACGAGAGGAGTGCTTGAAAAATCGCAGCCAATGAACCAACAC
ACGAGAATTATTCGTGCTTGCCAACAACCAAAAACAGGTATTTGGAGAAC
GAACAAATAAAGCACCCATTGATTATAGCCCAGGACCCTCTCAAATCGGT
TTCTGTACCTTGCACCGCACGGAAGAAGAGATACTGAACGGCACTCACAG
CGAATTGAAAATAACGGCAATAACAAAAACAGTTTGTCGTACATAAACGG
ACCAAACCCTCCTAATGCTTTTTGCTACTCGGGGGCGCTTTTCATTGCTG
CTGCTGTACTGTATTGCTACTGCTGCACTGTATCGGGCAGCTGACAGACG
AGGAGAGGGCTAAGATTGCGCAGGAGGCGGCGAAGAAGGCCGAGCGGGCG
TCGCGACAAGGGGGAGGGCTCAACCCCCTCGCGGTGTTGGTTTTGCTTTT
GGCCATCTCAATCGGTGAGAACGAGCGATGTGTCGGCCATTTTTACTTTG
TGTGAGTTGTTTTTTGGTTTTCGGCCATCTCAGTCGTTTTTGCTGCGTGT
CGTCGCTTGTGGCCATCTCAGTTGGTAGGAACGAGAAATTTGTTCGTGCT
CGCGGCTATTTGGTTTTGCTTTCGGGCGACACTCTAGTAAACGCCGCGAG
GGCAAGCCACTGTTCCGGAGTATCGAAGCCCCCGTGGCAAAAGAATGTTT
TTTTTTGTTTCATTGGTGTCGGTTCTTGCTGCTCTTTTCAGGGTTTCGTG
CCGTTCGCCCCGGTGTACTTTTGATGAAAGGCACACCCCTGTTTTCGAAT
CCCTGGCTCTGGAAACCCGGAACAAGGTCGATGAAACGTACTTCGACGGT
GTCGTTGACGCTAAAGTGGATAGAAATAGTTGTACACATTTGCGCACATG
TGTGCAGGTTGATGCTGTTGGCTGGTAAATATGGACCTCTTGAACCCATA
TCTCGTCTCCTTCCCGTCTCCCCTTCTCTCCTCCCGTTCTGTCTCCCAAA
CACTCAATACTCATGACGTGTGCGCGCGCGTGTGTGTCGGGTTCTCCGTG
TGCACTCTCGCAGGGTATTACTACTCCAACCAAAAGGCGTGACCAGTGAC
GTCATGGCTTCCTTGCGCTCGGGTTATTTGTTTTCGCCGGTGGGGTAGTT
GCTCCTCCCCGCCCCTGGTATCTAAACTTCCTAGATGTGTCTCTCTAGCG
AGAGCTTGAGATCGTGGGAGCGAACTAGAGTTCTGGTTACGACGCCGCGA
ACGGCAGCTTGGTGATTGCCGGGCGCTGTGCTTGCTTTCACGCTTTTACA
TGGCGTTTCGACCGTTTGCTGAAGCCGAGACACGCTGAGGAGGGCGGGGC
ACACGGGTGCGAATGTTCCCATTACGATTGATTGGTCGAGCCTTTCCGGC
GGCTCTCGCCAGGGGTGGGAAAAGGAGGCGGGCGGAACATCGCCCTGGAA
GAGAATAGCGAGCCGGTGCATGGTAGGGTTTCGTGTTCACCGTTCTGTTT
ACTTCGTGTCATGAGCACGAGGGGCGGCCGCAGGAGAGCCTGGGGGGGAG
GGGTAAGGGGGGGGCTGTGCACCACGTCCCCCCCCCTCTACTCTCAATCG
CTGCTGCTCGTGGGGTGTGGGCGATGTTGCCCTCTGCGGTTGTTTGTGAA
GGAGTTTGTTGTGTTTTGTTGGTAATTCAAGAAGGTCGTTTGGTTCCACG
TCATTTTCAAGACCAACCGCTTCGCCTTCGGTCTCTCGAAAAGCGTGCTT
CTTTTTGCCGGCACGTGCATCAGACAATCAGCACTGACTGACGTGATGAC
ACACCTGGGTGCGCAAGGGCAAGGGACATGTTGCGAGCACGGGCAACTAC
ATACAACTGCCATTTCTGTCTGTAGAACTTAACCATGGTCACCGGTACAC
TGGTACACCATGATCGGTACACTATTGCTGAACGACCGTCAAACTTTGAT
GCTCTGGTTGGGTCTAGAGACGGGCACGAAGGAAAGAAATACAAATAAGA
ATGGGAACTACTCTGGGCTCTCAACCCCCACCCTCCCCTCGCACACCCTG
TGAAACCTCGAAACCGCTTCGTCTGAGACAACAGCGGACACAATCAACTA
CAGCACGATCAAGATCCGCTTGGCTGCGGCGTGCTGTGGGTTGCCTCTGG
GGCGTCGCGTACCCCTTGCGGCCAACACAAGCGGACAACGTGCGTTCGAA
ACGAGCACGTTCAGATAGTTCCTACCTGCAGTTGTGACAGCAGCAGTTAT
TACAAATTGATTAGATTTGCACAACTCCGCGCGATGAGGGGTGGTGGGGC
AGCCTCTCGCACCTCACGCTCCGCGACGCCCCTACTCTCGTCTACTCCGA
GCACCCACACCAAGTCCAGGAAAGTTTTGGATTCCGTCGCGCTTAACAGT
TATCATCCGACTACGAGCGGAATGGAGTCGAAAAGTTGCCACACTGCTGT
GCCGTCGGTGTTGTGGTCCTGGTTAATGAGCAACTCCTTCCGCGCTACCG
ACCCATGCAAGTAACGATCAACACAGACAGGCCCGGTCGCTCCCCTTGAC
TTCTAGGAGACAACAAAGGCGGGCATTATTAGACTCCGGGAGGGGCTACC
CCTTGCCTGCTGTTACAAACTAACCCAGAGAACGCCTGTGCACGGTAAAC
CGCACAATGGTGTACGGCCACCCCAAGATGGAGGCCTCGCGCCCTATTCA
CTGTCTTTCCTTCCGGCACTGGTGCCGCGGTCGCCGCCCCAGTGAGCATC
ACGCCCCGGTTGCCGTCGCTTTGCTGAGGGGTAGCAAGGCGGACCGGATC
GACCTCGTTGGGGTTATTTTTACTGTTCCCAGCACGGGCATGTCCTTCTC
CACCGCCACCGCCGCCGCTCTTGCTAGGAGACGCAACTCGGGCGTCCTTT
ACTCAGGCGACAGCCATCCATGAAAAAAGGGGTTGGGGGGGCAGGGGATG
ATATATTATTGGCATATCATAGGCATTTCGGGATCCATGTGATCATGGCG
CGCAGCATCGCTTTTAAGATATGAAGCATTCTCGACCACAACAGCACCAG
ACCTACGCCACCCGGACCAAAACCTCAGCCCAAACATGATACTCCGTAAG
ACCCCAGTATCAGCTGAGGGGGCCGAGTTGAACAGACAAATCTACAAGGG
CAAGGACACGGTTTTTTGGCGAGACTATCGACACGCCTCGTACACCGCAC
CACCAACGTCCCACGGTGTGCGCAGAAGAAGAAGGGTGCGCCCCCCCCGC
CTACTTGCCTACCCCCAGCCCACCCTCTACCACACTAAACCGAAGTAAAA
GCTTTCGCTCTTAACTTGAC back to topCoding sequence (CDS) from alignment at Scaffold_235:36289..42658- >EsuBft321_3a-0001 ID=EsuBft321_3a-0001|Name=EsuBft321_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=423bp|location=Sequence derived from alignment at Scaffold_235:36289..42658- (Ectocarpus subulatus male Bft15b) ATGGCGGACACACCGGTGGTGGTTGAGTACTCAATGACGGAGGTCGCGAC TCACACGACGAAGGAGAGCACATGGTTGGTCATCAAGGACATGAACGACG GCGACACCCCCAAGGTTTACGACGTGTCGAGCTACCTGAACGACCACCCG GGGGGCGCGGAGGTGATGATGGAGGTGGCCGGGCAGGACGCGACTAACAT GTTCGAGGACATCGGGCACTCCTCGGACGCAAGAACGGAGATGAAGAAGT TCCAGATAGGGCTTCTCAAGCTGACAGACGAGGAGAGGGCTAAGATTGCG CAGGAGGCGGCGAAGAAGGCCGAGCGGGCGTCGCGACAAGGGGGAGGGCT CAACCCCCTCGCGGTGTTGGTTTTGCTTTTGGCCATCTCAATCGGGTATT ACTACTCCAACCAAAAGGCGTGA back to top
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