Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 40559.M7UW86 |
| ProteomeId | EsuBft321_2 |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | IPR017884 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | IPR009057 |
| Protein domains | IPR017930 |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | IPR001005 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 4751|Fungi |
| Length | 122 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.66e-05 |
| EggNOG OGs | COG5147@1|root,KOG0048@2759|Eukaryota,38EUR@33154|Opisthokonta,3P43R@4751|Fungi,3QX21@4890|Ascomycota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Myb-like DNA-binding domain |
| COG category | K |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
| GO | 0003682 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft321_2a-0001 ID=EsuBft321_2a-0001|Name=EsuBft321_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1221bp|location=Sequence derived from alignment at Scaffold_235:30577..34522+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAACCCAACCGCAGCAGCGGCAGCAGCAACAGCAGCAGCAACAGCAGC
AGCAGAAGCAGCAACAACGAGAGGGGGGGAGTCATCGTCGGGCAGCTGGA
ACAGGAAACGAGGGGACACGGTGACCACGACGGACAGCGTCCTGGCGTGG
GCTCTCAGGAGCATCGGGGGGAACGGGGACGAAGGCACGAAGCGTAACCT
TGGCGGTGTCGGTGACGCCAATAGCTGTGGCAGTAGCGGTGCAGGTGGCG
GCGGCGGCGGCGGCGGTGACAGCTCTCCTGGCGTGATCTACGAGGAAGCC
AAGGGTGATGGTGGTGGTCCCATTTCACGGTTGTTGCCAAGGGAAAGAGA
GGGCGTCAACCGGAGCGGCCGCGGAGGCTCGAACGGCGATAGCGGCGACG
TTGCTGGCAGCGGTGACGGTGCCATCGGTGCTCGAGATGATGGTTCGTCT
CGAAAGCGGTCGCTGGGAGCGAGAGAAGATAGAGAGGAGGAGAGCAAGAA
GCCCGGGTTTTGGGACAAGGACGAAAATACACGGTTTCTGCAGCACGGTG
GTGCGTGGGCACGGCTCGCACAAAAACACGCTGAGCTCGGGGTGGTAGCC
GTGGAAGAAAGCGAAGGTGAAGATGGTGCTCATGCCTCTCGTCGCAATAA
GGACGCCAACGCACATGTCGATGACGGCCGAGATAGTGATGGCGGTGGCG
GAGATAAGCGTCGTACATCACTAGCAGGGCCGGCCGGTGAAGGCACGAAG
CAGCCGGGGAAGAAGGCGCGCAAGGCGGGGCACAAGGGCAGCAAGCAGGG
GAAAGATAAGAAGCAGAAGAGTCGGCGCGGGTCCAATGAATGGGACGACG
AAGAGCACGAGCGGTTTGTCAAGGGTTTCGAGAGGCACGGCAAGGCGTGG
GCGGAAGTGGCGAAAGTGGTGCGGACGCGGGACGAGGGTCAGGTTCAAGC
GTACTCTTCCCGTTGGGTTACCCTTGCCGGTGGCCTTCACGAAAGCTTTC
GCAAGATTGGCGAGTGGGAAGACGACGAGCACGACCGGTTTATGGAGGCA
AGAGGGGTCAAGCTGTACGGCCGCTCGTGGGTCGATGTCGCGAGCGTGGT
GCGCACGCGAACGAACCGGCAAGTGATCATGCACGCCATGCACCGCCTGA
ACGACGACCTGTCCTCCAAGCCCAGCTTACGGGCTTGCACATCAACAGGT
GGGTGGAAGCTGGCGCCTTAG back to topprotein sequence of EsuBft321_2a-0001 >EsuBft321_2 ID=EsuBft321_2|Name=EsuBft321_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=406bp
MNPTAAAAAATAAATAAAEAATTRGGESSSGSWNRKRGDTVTTTDSVLAW
ALRSIGGNGDEGTKRNLGGVGDANSCGSSGAGGGGGGGGDSSPGVIYEEA
KGDGGGPISRLLPREREGVNRSGRGGSNGDSGDVAGSGDGAIGARDDGSS
RKRSLGAREDREEESKKPGFWDKDENTRFLQHGGAWARLAQKHAELGVVA
VEESEGEDGAHASRRNKDANAHVDDGRDSDGGGGDKRRTSLAGPAGEGTK
QPGKKARKAGHKGSKQGKDKKQKSRRGSNEWDDEEHERFVKGFERHGKAW
AEVAKVVRTRDEGQVQAYSSRWVTLAGGLHESFRKIGEWEDDEHDRFMEA
RGVKLYGRSWVDVASVVRTRTNRQVIMHAMHRLNDDLSSKPSLRACTSTG
GWKLAP back to topmRNA from alignment at Scaffold_235:30577..34522+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft321_2a-0001 ID=EsuBft321_2a-0001|Name=EsuBft321_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3946bp|location=Sequence derived from alignment at Scaffold_235:30577..34522+ (Ectocarpus subulatus male Bft15b)
ATGAACCCAACCGCAGCAGCGGCAGCAGCAACAGCAGCAGCAACAGCAGC
AGCAGAAGCAGCAACAACGAGAGGGGGGGAGTCATCGTCGGGCAGCTGGA
ACAGGAAACGAGGGGACACGGTGACCACGACGGACAGCGTCCTGGCGTGG
GCTCTCAGGAGCATCGGGGGGAACGGGGACGAAGGCACGAAGCGTAACCT
TGGCGGTGTCGGTGACGCCAATAGCTGTGGCAGTAGCGGTGCAGGTGGCG
GCGGCGGCGGCGGCGGTGACAGCTCTCCTGGCGTGATCTACGAGGAAGCC
AAGGGTGATGGTGGTGGTCCCATTTCACGGTTGTTGCCAAGGGAAAGAGA
GGGCGTCAACCGGAGCGGCCGCGGAGGCTCGAACGGCGATAGCGGCGACG
TTGCTGGCAGCGGTGACGGTGCCATCGGTGCTCGAGATGATGGTTCGTCT
CGAAAGCGGTCGCTGGGAGCGAGAGAAGATAGAGAGGAGGAGAGCAAGAA
GCCCGGGTTTTGGGACAAGGACGAAAATACACGGTTTCTGCAGGTATGCT
GTTATCATGCTGCGATGGAGTGGGGCAAACACCTTTGGTTGGCAAGGGTG
GAATGTCTAACTCCTAGCCCTGCTTCTGTTTTGCTCGAGTAATAACGATC
ATGGGTTTGTGAAGTAGTCAAGATGCCGTTGTTGATTCTCCTCAACATGC
TTCGAGGAAAAGAGAGCGCAAGTTTTAGAGCTACCTCTACCTGCCTGTCG
CTCTTGTCTGCCTGTCTGCCTGTCTGTCTATCTTGTCTCTCGCTGTTTGC
CTCTCTGTCTCATTTCTGTGTTTTGTCCCTAACCATCTCCCGCCCCGCCC
CCCTACCATTAACCCTAATCCGTGATTGTTGTTCTCTGTGTAAAGGGTGT
CGCGCAGCACGGTGGTGCGTGGGCACGGCTCGCACAAAAACACGCTGAGC
TCGGGGTGGTAGCCGTGGAAGAAAGCGAAGGTGAAGATGGTGCTCATGCC
TCTCGTCGCAATAAGGACGCCAACGCACATGTCGATGACGGCCGAGATAG
TGATGGCGGTGGCGGAGATAAGCGTCGTACATCACTAGCAGGGCCGGCCG
GTGAAGGCACGAAGCAGCCGGGGAAGAAGGCGCGCAAGGCGGGGCACAAG
GGCAGCAAGCAGGGGAAAGATAAGAAGCAGAAGAGTCGGCGCGGGTCCAA
TGAATGGGACGACGAAGAGCACGAGCGGTTTGTCAAGGTAAGGTCAAGGT
GCGCGCGTTGTTGCTGAACGAAGTTGAGGATATGGTACGGAGGAACGAGC
GGCAGTAGCAAAAAAGGGTGGTTTGTGTTTGATGCTGGGTGCTTGGAAGC
AGTCTGGGCAAAAACCCTGCCGGAAAAATTAGTAAAAAGTATACTTCGGG
CTTGGCACATGTATGTACACCAAACACCGTATAGTCTTTGAACGGAAAGA
CACCCCGTGATTAAGAAACTGTATCGCAAGCTCAATTTGAGCAGTTCATT
CGTCGTACAGCAGTTGTGGGGCACTGCTGGTGTAACGGCTATGCTTCGGA
GACTCTCCAACATCTCTCTGTCGAAGACGGTTCCTTCTTGGGGCGGGGTG
GTTTCAACATAACCATTGGAAGCGTCCCGTCTCCCCAACTTCTATCAATG
ATAAGCTCCCTATTTTCTTTATCGACTACCCCCATCCCCCTACCCTGTAC
TGGGGCATAGGAAGTGGGTTGAAAAGGCGGGAAGTGAAATTTGTAGGACA
GATAGACTAGGGAAGACATTTTTGAGCCACCTTTGACCAAGTAGGAAAGA
ACGATTGGCCATGGGGGATCGGTCCTGTGGGAACAATGCTCCGTCCTGTC
GAGGACGCATGGTCAATGGTCTGACCGCTGACCGCTAAGGCATGCGAAAC
ATAAGAGTACGCCCCCCCACCCACCGCCCACCCCCTCTTGTTGTCCCTTC
GCTCCAACCATGGCGTGTGGTTGCGCGCGTGTGCCATGAACCTCTTCCTC
GCCCTGACATGACAAGGGTTTCGAGAGGCACGGCAAGGCGTGGGCGGAAG
TGGCGAAAGTGGTGCGGACGCGGGACGAGGGTCAGGTTCAAGCGTACTCT
TCCCGTTGGGTTACCCTTGCCGGTGGCCTTCACGAAAGCTTTCGCAAGAT
TGGCGAGTGGGAAGACGACGAGCACGACCGGTTTATGGAGGCAAGAGTTT
GGGCTTTTGGTAGGGGGAAACGGAATCGGAGATGCTTTGCCTTGTGTGGG
TGTTGCCACGTGTTTTTTTCAGAACCGCGTGTAGTCGTGCCGCGAGAGAC
CGGTTTCAAGGCCAATGCCCCGTCCCCCCTCCACCAAGTCGTGTGGTCAA
TGCAGACATGAGTGCCCCCCCCCTCCCTCTCCCAGTCAGCGAGAGCCGGG
ATTTCTGTCAGTTGGAGATGGTGTGGAGAGACTTCACCTTTGGAGCAGGA
GCCATTTACTGCCGGTCGGTGTGGGAACGACAGTTGCACAGAAGACAGAT
TTGACGACACCAAATGAGCGGTCGGGAACCCCCCCCCCCCATAATACGGG
TCTCCCTCGGTGTTTGCCATCGGGGTCGGGTTTTCGTCGCCTGGCAACGA
CGTTGTAAAACAAGCCGTCCCCCTCGGTGTTTGCCATCGGGGTTGGGTTT
TCGTCGCTTGGCAACGACGTTGTAAAACAAGCCAATTCACTTCGTGAACT
CGGCAACCAGGTTACCGTTTTTTTTTTTTACCTCCGTTTTTTTTTTTGGC
GGTAACCATAATGGTGGTCGAGTAGATCATGTTGTGCGGGGTGGAGAACC
CTCACTCCGCGCAAGGGGGATGATCGCACCACGTTGTGTTAAAATGGTCA
AGCACCCTCGAGGCAGTTACACAGTGCTTACAACTGTCTCTGGAAGTGAA
AGCACCAGAAAATAAATTAATTCATACGCAGCTGTCATCCGTACGCAAGG
AAGTAAGCACAAGATGCCGAAAACCCTTAGCAGGATGCAGCGCACCCTTC
ATGCGACTCGCCGAATATCTCACGGCGCTTCGCGCTTGGTGATGTGAGAG
CCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCCGGCTTTGTAGGGATGC
GAGGTCAATGGTCTAACGACTACGGCATGCACGACTATGAGTACACCCCC
CCCCCTCCGGTGTTTGCCTATCGGGATTGGGTTTTCGTCGCTTGGCAACG
ACGTTGTCAAACAAGCCAATTCACTTCGTGAACTCGGCAACCAGGTTACC
GTGTTTTTTTTTTACCTCTGATTTTTTTTTTGGCGGAAACCATAATGGTG
GTCGAGTAGATCATGTTGTGCGGGGTGGAGAACCCTCGCTCCGCGCAAGG
GGGATGATCGCACCACGTTGTGTTAAAATGGTGAAGCACCCTCGAGGCAG
TTACACAGTGCTTACAACTGTCTCTGGAAGTTTAAGCACCAGAAATTAAA
TTAATTCATACGCAGCTGTCATCCGTACGCAAGGAAGTATGTACAAGATA
CCGAAAACCCTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAAT
ATCTCACGGCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAA
CCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCC
CCCATAATACGCCCTCTACCCTCGCCCGCGCGGGCGCCTCGCTTTGTCTC
GTGGCCCGTACCGTGGTACTCCCAACAGGGGGTCAAGCTGTACGGCCGCT
CGTGGGTCGATGTCGCGAGCGTGGTGCGCACGCGAACGAACCGGCAAGTG
ATCATGCACGCCATGCACCGCCTGAACGACGACCTGTCCTCCAAGCCCAG
CTTACGGGCTTGCACATCAACAGGTGGGTGGAAGCTGGCGCCTTAG back to topCoding sequence (CDS) from alignment at Scaffold_235:30577..34522+ >EsuBft321_2a-0001 ID=EsuBft321_2a-0001|Name=EsuBft321_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1221bp|location=Sequence derived from alignment at Scaffold_235:30577..34522+ (Ectocarpus subulatus male Bft15b)
ATGAACCCAACCGCAGCAGCGGCAGCAGCAACAGCAGCAGCAACAGCAGC
AGCAGAAGCAGCAACAACGAGAGGGGGGGAGTCATCGTCGGGCAGCTGGA
ACAGGAAACGAGGGGACACGGTGACCACGACGGACAGCGTCCTGGCGTGG
GCTCTCAGGAGCATCGGGGGGAACGGGGACGAAGGCACGAAGCGTAACCT
TGGCGGTGTCGGTGACGCCAATAGCTGTGGCAGTAGCGGTGCAGGTGGCG
GCGGCGGCGGCGGCGGTGACAGCTCTCCTGGCGTGATCTACGAGGAAGCC
AAGGGTGATGGTGGTGGTCCCATTTCACGGTTGTTGCCAAGGGAAAGAGA
GGGCGTCAACCGGAGCGGCCGCGGAGGCTCGAACGGCGATAGCGGCGACG
TTGCTGGCAGCGGTGACGGTGCCATCGGTGCTCGAGATGATGGTTCGTCT
CGAAAGCGGTCGCTGGGAGCGAGAGAAGATAGAGAGGAGGAGAGCAAGAA
GCCCGGGTTTTGGGACAAGGACGAAAATACACGGTTTCTGCAGCACGGTG
GTGCGTGGGCACGGCTCGCACAAAAACACGCTGAGCTCGGGGTGGTAGCC
GTGGAAGAAAGCGAAGGTGAAGATGGTGCTCATGCCTCTCGTCGCAATAA
GGACGCCAACGCACATGTCGATGACGGCCGAGATAGTGATGGCGGTGGCG
GAGATAAGCGTCGTACATCACTAGCAGGGCCGGCCGGTGAAGGCACGAAG
CAGCCGGGGAAGAAGGCGCGCAAGGCGGGGCACAAGGGCAGCAAGCAGGG
GAAAGATAAGAAGCAGAAGAGTCGGCGCGGGTCCAATGAATGGGACGACG
AAGAGCACGAGCGGTTTGTCAAGGGTTTCGAGAGGCACGGCAAGGCGTGG
GCGGAAGTGGCGAAAGTGGTGCGGACGCGGGACGAGGGTCAGGTTCAAGC
GTACTCTTCCCGTTGGGTTACCCTTGCCGGTGGCCTTCACGAAAGCTTTC
GCAAGATTGGCGAGTGGGAAGACGACGAGCACGACCGGTTTATGGAGGCA
AGAGGGGTCAAGCTGTACGGCCGCTCGTGGGTCGATGTCGCGAGCGTGGT
GCGCACGCGAACGAACCGGCAAGTGATCATGCACGCCATGCACCGCCTGA
ACGACGACCTGTCCTCCAAGCCCAGCTTACGGGCTTGCACATCAACAGGT
GGGTGGAAGCTGGCGCCTTAG back to top
|