Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft321_13 |
| Protein domains | IPR000014 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 313 |
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-00_010380.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0007165 |
| GO | 0004871 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft321_13a-0001 ID=EsuBft321_13a-0001|Name=EsuBft321_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3132bp|location=Sequence derived from alignment at Scaffold_235:136150..139707+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCATTTGCGCGGCAAAAGTCCATGAAATGTTTCCTGCGTCATGACCA
ACTTGGCTGCAGATCGAGACGTCCCTGGCGGACACTCTTCGAACGCACTC
TCGGATCGTTGCCATACGGCGCCGTCCTGAGCCTGGCGAGAGAAAATGGA
GAGGATGACATTCAAGCCTCGACGACAACGGCGGCGGCGGGCAAAGTTGT
GTGGGCGAGCGAGGGGTTTGAGAAGCTGGCTGGCGTTGACGCTTTCGATG
TCGTCGGGCAGGAGGTCGGCTTCTTGTTCGAGGTAGGAGGTAACGAGGAG
GATGACGAAGGCGAGGAAGCAGGAGAGCTGAAGCGGAGCTTGGAACTTGG
ACAGGGTTGCACGCTGTGGATGACGATGGGGGAACAGCGGGATGGCTTGA
CCAACGTGCTCTGCGTGCACCAACCGGTGACGGTGCCACCTCAGCTAAGC
GAAGAGGGGAGGTACTCGGTTCTGCTTTTCTTTGATACGGCCTCCGTCCT
ACTTGAGAACCCACGAAGACAAGCAACAGAAGAGCAAGGAGAAGGGGGCG
AGATTGGTGGGAAACAAGCAGACTCACTCTACCTAAAAGGGAAAGACCAA
GACCGTGAGCAATACCGACAACGGACTTGCTACAGCCTGTCGAGGGCGAT
GGCACTTCTCTTGGCTGACAACGTCGCCGTTGACATCGCCAACGGTCTTT
TGAAGGAGGCCTACGTTTCTTTCGAAGGGAACAACGATACCGACTATCAG
AGCGAAACCCTTACCCCAAGCAGTGATGACAGGAGCGCACGCATCGTCCA
CGAAATAAGAAGGCTAGGGAGCAAAGAGGTTGGGGGAGAAGCCGGCGACG
TATATTTGGGCGGGCAGCGGGGGAATGGTGAAGTCAGGGGTCCGACTAGC
CAGGAACAACGCTCTTTGTTGCAATCGAAACGATCGGGGACGACCTACTG
CTCTGATGATGTGTCCAGATACCCGACAGAGGAACGAGAAGGGAAATACC
TGAGAGGAGATCTACTCATGGATAGCGGCATCGTGGACGAGCAGCAGCAC
GGCGCCAGTCACATCGAAGACCAACTCATCTGTAGCGGCCAGCCGGTGAA
CGGCCGTGGTAGCAGAAGCGGAGACGACGACGAGGAGGAGGAAGGACGTA
CAAGTGGGAACATTAGACGAATACAACAACACCGACAACAACTACCTAAA
TCATTTCCTGCGTTCTCTGCGGCAACAGAAAGTTGCGGAGCGGCGGAATA
CTCGTCGGGCGACGAGACTAGCACAGAACCAAGGGACGATTTGCTGGGGT
CTCCTGGTCGTGAAGGGGCAACGGCGGAAGCAACGGCGTCACCGGCAGAG
CCAAAGCTATTTGATGGCGGAGATGAGCGAATCGATGGGGAATTCAACAA
CAACGTCCACCATGGGGGCCTTAGCAACGGCGGTGGCAATAGCAGCTTCG
ATCGAAGCTTTCTTTCGCCAAGTAGTCGGCCTCCAATGGCCGGCTCTCGA
ATAAGCTTGGATCGTACTCAAGAGAGCGAGGAGGAGGCCGGCACTGACAC
AACGACGGTGCAGAGGGAAGGCAGCGACGACCCGTACGAGGACGATTTCT
GTTGTGATGAAGAGGACGAGTCCCTATCCTTGTCTCTGCCTCGGCCGGCG
CAGGAAGAAGGGAGAGTCACTGGCAAATACATCAGCAGCGACATCACCAT
CAACAATGGTCCCGTTGTCGGCGGACACCGTGGTGTCGACGATGGTTTTG
ACGTCAAGGGTCACTGGCAAGGTGACAAGGATGATGCCTATTCGTCATCG
TCCTCGGATGACGTATACAGCGGCACGGTAGCGGGTGGGCTTCAGATTAA
CCTGCACGGTGGTGGTGTCGACGGGGTGGAGAGCGAGCGCGATGATAACG
ACGAGCTGACATGGGAGGGCTCTCCGGAAGGATCGAGCGCACACTATAGT
TACCACAACCCATGTCAGGAAGGTCAAGAAATAAGTGTAGATGGCGATGC
TACAGGTCTAAGTGCCGTTACTGATTTTCGGGGTGGCACGGACGGCAGTA
GTGCCACCAATGGTGTTTCTCATCGAGACAAACCACCATGAGCTGCTCAT
GCCGACGATAGTGAAAATTTGTTTTTTTAGTGAGATGTTCGGTCGCATGT
ACAAGTAGAACGGTTGCACGTGAAGACTTGTCATACAGATCGTCATGGTA
TCAAGAAGCGGCGAGTGTTAGTTTTTCGAGCATTGCATAAGGAGCGTCGG
TTTGTAGCCAAGACACTAGAGTGCACTCCTCTTTCGTAAACAGGTGGTTA
CGGTACGCTCCCCCTTCGTAAACAGAGAAACATATTATTCTGATGCCATT
TTGGGATACGTGTGACTTACTAAATGCGGAAACCACCTGATAAAGCTCAG
GGGCAACAAGTGAATGTCATCAGCCAGGCCGCCGCCCCTCTCCGTACACC
TTGCATATAGACTATTGTATGTTTGCTAGAAGAACTGGTTCAACTCATTG
TGCTCTTCTTTCTCAAATGACTTGCCTTTTGGATGTAGTGGTAACGCGTC
TCCAATACCTCCAAGGAAGAGTTATTTCGAGCTTAGAAATTCCTCGCAGG
GGGGGATGGGTATTCCCCCCGCTTGTGACGAATGGTACTGTAGTCTGTCG
TAGACTGAAGTCGCCCCTGATTGTTCGCACAGGCGCGTAGACTAAATCCA
AACATTAAGATAATACGTAAAATACTCATTCAACCTTTTGTCAGAAAGAG
ATGATCCTCACCTCACCCCTCGCCGACCTTGCGTGTTTGACATCGTCTGT
CAAAAAACATTGAATAATAACAGACAGAGACAAACCGCGGCGTAGAGGTG
ACGAATCCGCTCTTCCAGGCAAGGTTATATCTCTCTTTCAATCAGGATAG
ATATCTCTCACCTTAGCACAGATCATAAGCAATGTCTGTAGAGAACGACC
ATGCAGAACAATCAAGCAGTGGTGGTACGACTTCAAGCGGTGATTGGCGA
CGTCCAACAGCAGTCACAAGGTTCCTCACAAGCTCCGTAATCAGCGTATC
AGGTTCAGCACTCACAAGGGTTGGCAGTTGGTCCGGTACAAAGATAGGGA
TATGACTCAGTTGCTCTCGCGTGATCGGCGGT back to topprotein sequence of EsuBft321_13a-0001 >EsuBft321_13 ID=EsuBft321_13|Name=EsuBft321_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=696bp
MAFARQKSMKCFLRHDQLGCRSRRPWRTLFERTLGSLPYGAVLSLARENG
EDDIQASTTTAAAGKVVWASEGFEKLAGVDAFDVVGQEVGFLFEVGGNEE
DDEGEEAGELKRSLELGQGCTLWMTMGEQRDGLTNVLCVHQPVTVPPQLS
EEGRYSVLLFFDTASVLLENPRRQATEEQGEGGEIGGKQADSLYLKGKDQ
DREQYRQRTCYSLSRAMALLLADNVAVDIANGLLKEAYVSFEGNNDTDYQ
SETLTPSSDDRSARIVHEIRRLGSKEVGGEAGDVYLGGQRGNGEVRGPTS
QEQRSLLQSKRSGTTYCSDDVSRYPTEEREGKYLRGDLLMDSGIVDEQQH
GASHIEDQLICSGQPVNGRGSRSGDDDEEEEGRTSGNIRRIQQHRQQLPK
SFPAFSAATESCGAAEYSSGDETSTEPRDDLLGSPGREGATAEATASPAE
PKLFDGGDERIDGEFNNNVHHGGLSNGGGNSSFDRSFLSPSSRPPMAGSR
ISLDRTQESEEEAGTDTTTVQREGSDDPYEDDFCCDEEDESLSLSLPRPA
QEEGRVTGKYISSDITINNGPVVGGHRGVDDGFDVKGHWQGDKDDAYSSS
SSDDVYSGTVAGGLQINLHGGGVDGVESERDDNDELTWEGSPEGSSAHYS
YHNPCQEGQEISVDGDATGLSAVTDFRGGTDGSSATNGVSHRDKPP back to topmRNA from alignment at Scaffold_235:136150..139707+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft321_13a-0001 ID=EsuBft321_13a-0001|Name=EsuBft321_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3558bp|location=Sequence derived from alignment at Scaffold_235:136150..139707+ (Ectocarpus subulatus male Bft15b)
ATGGCATTTGCGCGGCAAAAGTCCATGGTTAGCACACATACCTGATATCG
AATCATCGCGGTAACAAGTGTTCGTGGCACGACCATGGAACAGGATTCAG
AATCCAAAGTTACGGGTAGAGAATTGTGGCGTTGCCTGGAGTGAGGATCT
ATTTCTGGGTGTTTGCAATGTAAGAAATGTTTCCTGCGTCATGACCAACT
TGGCTGCAGATCGAGACGTCCCTGGCGGACACTCTTCGAACGCACTCTCG
GATCGTTGCCATACGGCGCCGTCCTGAGCCTGGCGAGAGAAAATGGAGAG
GATGACATTCAAGCCTCGACGACAACGGCGGCGGCGGGCAAAGTTGTGTG
GGCGAGCGAGGGGTTTGAGAAGCTGGCTGGCGTTGACGCTTTCGATGTCG
TCGGGCAGGAGGTCGGCTTCTTGTTCGAGGTAGGAGGTAACGAGGAGGAT
GACGAAGGCGAGGAAGCAGGAGAGCTGAAGCGGAGCTTGGAACTTGGACA
GGTGAGTTTTGTCGGACACTCGCTAGACAACGATGGCGTCCCCAAATTCA
GAACCACGGCTTTCGGGCCGCCTTTTTATCGCTGTTTTCCATAACTTTTT
TCGGGATTGTAGAGCAACATTAGATCCGTGTGTAACTCCGCATTCACTCA
TCTTCCCCTCTGCTTAAAGGGGACCCCTGCCACTCCCCTTCCCTCCCTCT
CCATCCATGTTCCCTGCAATCTCCTTTCATGCCCTCATTTCCCGCCAAAC
ATGCTTGGAATTGCTACATCATGGCTCTAGGGTTGCACGCTGTGGATGAC
GATGGGGGAACAGCGGGATGGCTTGACCAACGTGCTCTGCGTGCACCAAC
CGGTGACGGTGCCACCTCAGCTAAGCGAAGAGGGGAGGTACTCGGTTCTG
CTTTTCTTTGATACGGCCTCCGTCCTACTTGAGAACCCACGAAGACAAGC
AACAGAAGAGCAAGGAGAAGGGGGCGAGATTGGTGGGAAACAAGCAGACT
CACTCTACCTAAAAGGGAAAGACCAAGACCGTGAGCAATACCGACAACGG
ACTTGCTACAGCCTGTCGAGGGCGATGGCACTTCTCTTGGCTGACAACGT
CGCCGTTGACATCGCCAACGGTCTTTTGAAGGAGGCCTACGTTTCTTTCG
AAGGGAACAACGATACCGACTATCAGAGCGAAACCCTTACCCCAAGCAGT
GATGACAGGAGCGCACGCATCGTCCACGAAATAAGAAGGCTAGGGAGCAA
AGAGGTTGGGGGAGAAGCCGGCGACGTATATTTGGGCGGGCAGCGGGGGA
ATGGTGAAGTCAGGGGTCCGACTAGCCAGGAACAACGCTCTTTGTTGCAA
TCGAAACGATCGGGGACGACCTACTGCTCTGATGATGTGTCCAGATACCC
GACAGAGGAACGAGAAGGGAAATACCTGAGAGGAGATCTACTCATGGATA
GCGGCATCGTGGACGAGCAGCAGCACGGCGCCAGTCACATCGAAGACCAA
CTCATCTGTAGCGGCCAGCCGGTGAACGGCCGTGGTAGCAGAAGCGGAGA
CGACGACGAGGAGGAGGAAGGACGTACAAGTGGGAACATTAGACGAATAC
AACAACACCGACAACAACTACCTAAATCATTTCCTGCGTTCTCTGCGGCA
ACAGAAAGTTGCGGAGCGGCGGAATACTCGTCGGGCGACGAGACTAGCAC
AGAACCAAGGGACGATTTGCTGGGGTCTCCTGGTCGTGAAGGGGCAACGG
CGGAAGCAACGGCGTCACCGGCAGAGCCAAAGCTATTTGATGGCGGAGAT
GAGCGAATCGATGGGGAATTCAACAACAACGTCCACCATGGGGGCCTTAG
CAACGGCGGTGGCAATAGCAGCTTCGATCGAAGCTTTCTTTCGCCAAGTA
GTCGGCCTCCAATGGCCGGCTCTCGAATAAGCTTGGATCGTACTCAAGAG
AGCGAGGAGGAGGCCGGCACTGACACAACGACGGTGCAGAGGGAAGGCAG
CGACGACCCGTACGAGGACGATTTCTGTTGTGATGAAGAGGACGAGTCCC
TATCCTTGTCTCTGCCTCGGCCGGCGCAGGAAGAAGGGAGAGTCACTGGC
AAATACATCAGCAGCGACATCACCATCAACAATGGTCCCGTTGTCGGCGG
ACACCGTGGTGTCGACGATGGTTTTGACGTCAAGGGTCACTGGCAAGGTG
ACAAGGATGATGCCTATTCGTCATCGTCCTCGGATGACGTATACAGCGGC
ACGGTAGCGGGTGGGCTTCAGATTAACCTGCACGGTGGTGGTGTCGACGG
GGTGGAGAGCGAGCGCGATGATAACGACGAGCTGACATGGGAGGGCTCTC
CGGAAGGATCGAGCGCACACTATAGTTACCACAACCCATGTCAGGAAGGT
CAAGAAATAAGTGTAGATGGCGATGCTACAGGTCTAAGTGCCGTTACTGA
TTTTCGGGGTGGCACGGACGGCAGTAGTGCCACCAATGGTGTTTCTCATC
GAGACAAACCACCATGAGCTGCTCATGCCGACGATAGTGAAAATTTGTTT
TTTTAGTGAGATGTTCGGTCGCATGTACAAGTAGAACGGTTGCACGTGAA
GACTTGTCATACAGATCGTCATGGTATCAAGAAGCGGCGAGTGTTAGTTT
TTCGAGCATTGCATAAGGAGCGTCGGTTTGTAGCCAAGACACTAGAGTGC
ACTCCTCTTTCGTAAACAGGTGGTTACGGTACGCTCCCCCTTCGTAAACA
GAGAAACATATTATTCTGATGCCATTTTGGGATACGTGTGACTTACTAAA
TGCGGAAACCACCTGATAAAGCTCAGGGGCAACAAGTGAATGTCATCAGC
CAGGCCGCCGCCCCTCTCCGTACACCTTGCATATAGACTATTGTATGTTT
GCTAGAAGAACTGGTTCAACTCATTGTGCTCTTCTTTCTCAAATGACTTG
CCTTTTGGATGTAGTGGTAACGCGTCTCCAATACCTCCAAGGAAGAGTTA
TTTCGAGCTTAGAAATTCCTCGCAGGGGGGGATGGGTATTCCCCCCGCTT
GTGACGAATGGTACTGTAGTCTGTCGTAGACTGAAGTCGCCCCTGATTGT
TCGCACAGGCGCGTAGACTAAATCCAAACATTAAGATAATACGTAAAATA
CTCATTCAACCTTTTGTCAGAAAGAGATGATCCTCACCTCACCCCTCGCC
GACCTTGCGTGTTTGACATCGTCTGTCAAAAAACATTGAATAATAACAGA
CAGAGACAAACCGCGGCGTAGAGGTGACGAATCCGCTCTTCCAGGCAAGG
TTATATCTCTCTTTCAATCAGGATAGATATCTCTCACCTTAGCACAGATC
ATAAGCAATGTCTGTAGAGAACGACCATGCAGAACAATCAAGCAGTGGTG
GTACGACTTCAAGCGGTGATTGGCGACGTCCAACAGCAGTCACAAGGTTC
CTCACAAGCTCCGTAATCAGCGTATCAGGTTCAGCACTCACAAGGGTTGG
CAGTTGGTCCGGTACAAAGATAGGGATATGACTCAGTTGCTCTCGCGTGA
TCGGCGGT back to topCoding sequence (CDS) from alignment at Scaffold_235:136150..139707+ >EsuBft321_13a-0001 ID=EsuBft321_13a-0001|Name=EsuBft321_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2091bp|location=Sequence derived from alignment at Scaffold_235:136150..139707+ (Ectocarpus subulatus male Bft15b)
ATGGCATTTGCGCGGCAAAAGTCCATGAAATGTTTCCTGCGTCATGACCA
ACTTGGCTGCAGATCGAGACGTCCCTGGCGGACACTCTTCGAACGCACTC
TCGGATCGTTGCCATACGGCGCCGTCCTGAGCCTGGCGAGAGAAAATGGA
GAGGATGACATTCAAGCCTCGACGACAACGGCGGCGGCGGGCAAAGTTGT
GTGGGCGAGCGAGGGGTTTGAGAAGCTGGCTGGCGTTGACGCTTTCGATG
TCGTCGGGCAGGAGGTCGGCTTCTTGTTCGAGGTAGGAGGTAACGAGGAG
GATGACGAAGGCGAGGAAGCAGGAGAGCTGAAGCGGAGCTTGGAACTTGG
ACAGGGTTGCACGCTGTGGATGACGATGGGGGAACAGCGGGATGGCTTGA
CCAACGTGCTCTGCGTGCACCAACCGGTGACGGTGCCACCTCAGCTAAGC
GAAGAGGGGAGGTACTCGGTTCTGCTTTTCTTTGATACGGCCTCCGTCCT
ACTTGAGAACCCACGAAGACAAGCAACAGAAGAGCAAGGAGAAGGGGGCG
AGATTGGTGGGAAACAAGCAGACTCACTCTACCTAAAAGGGAAAGACCAA
GACCGTGAGCAATACCGACAACGGACTTGCTACAGCCTGTCGAGGGCGAT
GGCACTTCTCTTGGCTGACAACGTCGCCGTTGACATCGCCAACGGTCTTT
TGAAGGAGGCCTACGTTTCTTTCGAAGGGAACAACGATACCGACTATCAG
AGCGAAACCCTTACCCCAAGCAGTGATGACAGGAGCGCACGCATCGTCCA
CGAAATAAGAAGGCTAGGGAGCAAAGAGGTTGGGGGAGAAGCCGGCGACG
TATATTTGGGCGGGCAGCGGGGGAATGGTGAAGTCAGGGGTCCGACTAGC
CAGGAACAACGCTCTTTGTTGCAATCGAAACGATCGGGGACGACCTACTG
CTCTGATGATGTGTCCAGATACCCGACAGAGGAACGAGAAGGGAAATACC
TGAGAGGAGATCTACTCATGGATAGCGGCATCGTGGACGAGCAGCAGCAC
GGCGCCAGTCACATCGAAGACCAACTCATCTGTAGCGGCCAGCCGGTGAA
CGGCCGTGGTAGCAGAAGCGGAGACGACGACGAGGAGGAGGAAGGACGTA
CAAGTGGGAACATTAGACGAATACAACAACACCGACAACAACTACCTAAA
TCATTTCCTGCGTTCTCTGCGGCAACAGAAAGTTGCGGAGCGGCGGAATA
CTCGTCGGGCGACGAGACTAGCACAGAACCAAGGGACGATTTGCTGGGGT
CTCCTGGTCGTGAAGGGGCAACGGCGGAAGCAACGGCGTCACCGGCAGAG
CCAAAGCTATTTGATGGCGGAGATGAGCGAATCGATGGGGAATTCAACAA
CAACGTCCACCATGGGGGCCTTAGCAACGGCGGTGGCAATAGCAGCTTCG
ATCGAAGCTTTCTTTCGCCAAGTAGTCGGCCTCCAATGGCCGGCTCTCGA
ATAAGCTTGGATCGTACTCAAGAGAGCGAGGAGGAGGCCGGCACTGACAC
AACGACGGTGCAGAGGGAAGGCAGCGACGACCCGTACGAGGACGATTTCT
GTTGTGATGAAGAGGACGAGTCCCTATCCTTGTCTCTGCCTCGGCCGGCG
CAGGAAGAAGGGAGAGTCACTGGCAAATACATCAGCAGCGACATCACCAT
CAACAATGGTCCCGTTGTCGGCGGACACCGTGGTGTCGACGATGGTTTTG
ACGTCAAGGGTCACTGGCAAGGTGACAAGGATGATGCCTATTCGTCATCG
TCCTCGGATGACGTATACAGCGGCACGGTAGCGGGTGGGCTTCAGATTAA
CCTGCACGGTGGTGGTGTCGACGGGGTGGAGAGCGAGCGCGATGATAACG
ACGAGCTGACATGGGAGGGCTCTCCGGAAGGATCGAGCGCACACTATAGT
TACCACAACCCATGTCAGGAAGGTCAAGAAATAAGTGTAGATGGCGATGC
TACAGGTCTAAGTGCCGTTACTGATTTTCGGGGTGGCACGGACGGCAGTA
GTGCCACCAATGGTGTTTCTCATCGAGACAAACCACCATGA back to top
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