Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft321_12 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 183 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-00_010640.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft321_12a-0001 ID=EsuBft321_12a-0001|Name=EsuBft321_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1836bp|location=Sequence derived from alignment at Scaffold_235:127345..131986+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCAAGCTCAAGAAGCTTCAGAAGGAAAGACTGATCGTGGCGCGGCT
AGGCTTTCCCGACAAAGCCATGGAGATCGATGAGCACATCGAAAAAATAC
GCGCGGATCTCAGGAGCGAGCGCGAAAAGGTGGACTCGAGGATTCTCGAG
GAGGAGTTGGCGGCACTAGCCATCCAGCACCGTGAAAAGCTGACTAGCCT
TGAACAAGAGCTTAAGGAAGACGAGCAAAAAGTCAGCAGGTCGTTCGAGC
GGGAAAGGGCTGTGCTCCTGCGAAAGCAGGAGAAGCAGTTTGTTCAGCTT
GTGGATGACGCTATCAAGCGAGCAATCGGCAAGAGCAAGTCGTGTTCTTG
CTCGAAGAAATACCTGTGCCACCACAACAAGACGGCCAGCTTCAACACTC
GCAGGCCAAAGAAGGAGGTCATCCACTTCCGAAAGAACGCGAAACGCCTT
CGACACGGAGGCAGACTAGACGAGTCTGCGGCATGGGAGGAGAAAGCAGC
GGAACTTGACGCGAATCATTTGGATTCCTGGCGAGAAGAGGTTGCCGCTT
CATTGACGGCTAGCGCGTGGGGAGGGAGCAGCAGTGCTCTGGACCAACTT
GCCACCCAGCATCAGCGCGAGATTAGCCGGATGGAAACGGCGCAGGCAAA
CGGGTGGACGCTGATGCTGATGCGGCACCAAACCGCTCGGAGAAACTGTC
ACAACGTCATCATGGTCGAGCGGAAGAAGGCAAGCAAGGGAAAACGCTCG
GCTGCATTTGTGCGGGACGTCGAGGGTATACTTAAGACCGTCATGGAGGA
CGGGGGTTCAGTCACAGGAGAAGCAGAAGGAAAGGAATCCCAACCCAGCG
GTGGCGTAGCGGCGGGCCGACCACCAACACGTCCGAGTAGTGCTCCGCCG
GCACGCGGAAAGAGACCGCAGCCGGCCGCCGCCACCACCAGAAACATCAA
CCAGCATGTATCGGAAACTGTGGCAGCGTCACCGTCAGCAACAGAGAATG
CTGGCGAGGGTGAGAATGTTGGCGCAGCGAACGAAGGCGTAGACGTCGAT
GACGACGATTCTTTCGGCAAAGACTCGCACGATCTCCGGTGCTTCGATGA
GCTTGAGGACGAGGCGTGGAAGAACTTTTCCTACGACGATTACCCCGCCG
CCGGTTCGCCGGAGGAACCGGAGTGGATCCACACCCCGTGGTGCGGGACG
AACAGCGGTGACATTCCCGTCCTTGACAAGGTCTCGGGCAGGAAGGTTCT
CGACAGCGATGGGGTACCGATGGTACAGCTTGTGCTACCCACGTCGGCGG
CTTCCGCTCCTCCGTCGTCCGCCTCCTCTGCGGACGGTGTCGATGGCAAT
ACCGCTACACAGCCGGTGGTCAGGGGTGGTGACGCTTCCGAAGGCTTTGG
CGACGGGGGGGACAAGGGAGTTATCGCAGAGCATAAAAGAGACGTTGGCA
GCCCCCGCAGTGGCGCACAAGATGGTGCTGACAAAGGAAGGCCGTGTTCG
GCAACTGGAGAGTTGTTTACAGGAGACCCAGCAGCTGCAATATCGCCCCT
TAGTTTTGCCGGGGAGGGGGAGGAGAGGGACAGCCAAGGCGACGGTGGCG
GTAGCGGGAGAAGTCCGGGTAGCGTAGGAGATGGCTTCACGTCGCCACGG
GCTCTGGCCGGGGGCGGCGAGCTGCGGAGGTACAACTGGCTAGGAGCTGG
CGCCGCGCCCACGAAGCCATCGCTCCTCGCGACGAGTCGGATACCGTCGG
GAAACCGTGCCGACAAGCAAAGGTTCAGAAACGCGAAGAGACAAGATTCC
AACAGAAAGGTGGATGACGCGACGACACAGGATTAG back to topprotein sequence of EsuBft321_12a-0001 >EsuBft321_12 ID=EsuBft321_12|Name=EsuBft321_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=611bp
MAKLKKLQKERLIVARLGFPDKAMEIDEHIEKIRADLRSEREKVDSRILE
EELAALAIQHREKLTSLEQELKEDEQKVSRSFERERAVLLRKQEKQFVQL
VDDAIKRAIGKSKSCSCSKKYLCHHNKTASFNTRRPKKEVIHFRKNAKRL
RHGGRLDESAAWEEKAAELDANHLDSWREEVAASLTASAWGGSSSALDQL
ATQHQREISRMETAQANGWTLMLMRHQTARRNCHNVIMVERKKASKGKRS
AAFVRDVEGILKTVMEDGGSVTGEAEGKESQPSGGVAAGRPPTRPSSAPP
ARGKRPQPAAATTRNINQHVSETVAASPSATENAGEGENVGAANEGVDVD
DDDSFGKDSHDLRCFDELEDEAWKNFSYDDYPAAGSPEEPEWIHTPWCGT
NSGDIPVLDKVSGRKVLDSDGVPMVQLVLPTSAASAPPSSASSADGVDGN
TATQPVVRGGDASEGFGDGGDKGVIAEHKRDVGSPRSGAQDGADKGRPCS
ATGELFTGDPAAAISPLSFAGEGEERDSQGDGGGSGRSPGSVGDGFTSPR
ALAGGGELRRYNWLGAGAAPTKPSLLATSRIPSGNRADKQRFRNAKRQDS
NRKVDDATTQD back to topmRNA from alignment at Scaffold_235:127345..131986+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft321_12a-0001 ID=EsuBft321_12a-0001|Name=EsuBft321_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4642bp|location=Sequence derived from alignment at Scaffold_235:127345..131986+ (Ectocarpus subulatus male Bft15b)
ATGGCCAAGCTCAAGAAGCTTCAGAAGGAAAGACTGATCGTGGCGCGGCT
AGGCTTTCCCGACAAAGCCATGGAGATCGATGAGCACATCGAAAAAATAC
GCGCGGATCTCAGGGTGAGGTCGCTTCGTTCCGGGTCTATTCACAAGCAG
AAAGCTGTGTTGCCGTAGGCTACATAGAAAATTTGATGGGTTAGGCGTCG
TTTGTACACTACTGCGGAGCTCACTTTCTCTTTTTTTTGTGGTCCTCTGA
TGGACTGTCTGAATTTCAATTCGGGACGCTGGCAATCACGAAAACCTTTA
TCATGCTGGTTCGATTTGTGCGGTTGCACGTGTCTTGCTTGTTTCTCGTT
TGCCTGTTGGGTACATCACACCCGCTCTGGAATGGCAACATGCGTCGTCA
GAGCGAGCGCGAAAAGGTGGACTCGAGGATTCTCGAGGAGGAGTTGGCGG
CACTAGCCATCCAGCACCGTGAAAAGCTGACTAGCCTTGAACAAGAGCTT
AAGGAAGACGAGCAAAAAGTCAGCAGGTCGTTCGAGCGGGAAAGGGTACG
TGGAGAAACCAAAATACTCCACGTTGTTCAAGGGCCGTTGGCCTCTACTC
TACTGCCTTCAAGCCGAGAGTCGTGGCCTGGGTGTAGTGCGCGCGATTCA
TCGAGAAAGTTGTCTCTCGTTTTTACAAATAGACAAGCATTGACCGCCGC
CTGCCTTGTGAGCGTTTGATTTCGTGCTCAAGGTTAGTTTAGAGGAGGGA
CGGCACAAATCAGTACCTGGTCTCTTAACATTGCTACAAACCAGCATTCT
TGATCACCTCCCATTACCTCGCCGGGAGAGGAGTTGCGCACGGTGGACCA
CGCTAAATCTTAGAGTATCCCAGCTGTTGAGATGGCTAATTTAGGTGATT
GTCGGAATAACTTGACCCTCGAAAGGTGACCAGTGTGTGGGTAGCTTCGG
CTGTACTTCACGTCAAAACGCTGAGTGGCTCTGCCAGGCGTCTTCTCGGC
CCCAACCGGGATGCACAACCAATGGTCTATCGACGAAGCCAGCGATGAAT
TGAGTGCTTCTTCCCTCTCGCCTCCAGAGGTTTCGCCTTTGACCACGTTT
GACTTGATATCTCGTTGCGTCCCATGACGTGCTTATGTGAACCAACAGGC
TGTGCTCCTGCGAAAGCAGGAGAAGCAGTTTGTTCAGCTTGTGGATGACG
CTATCAAGCGAGCAATCGGCAAGAGCAAGGTAAAGCGTTGAAACTACAGA
TGATGTCCCTGTAGGAGCCATGTTTACTCTTACTTGATAATTTCAACTCG
CTTCTAGTCGAAATGCATAGCGTTTGTATCCCCCATGACCATTCTACCGC
TAACAAGGATAAGAGTTGTGACCCCTTGGTCCCGGGTTCTTGATACATCA
TACGTGGTATGACCTCAATACGCTAATTGACTTGTCAACATGGATGTTTG
TCTATAATGACAACGTTATCAGTGCTGGCACACCCTTGTGTCAATTGTTC
TCTCAAGTTCATCTTGCAAAACGTCAAATAGACCTCCCGGCTATGCTAGC
TTACGCGTTATTTGAAACAGGAGAACCCCAGAAGAAGAATTTTGCTTCAT
ACACCTCCTGTATGTCATCTGTCACATGTTCTAGCTAGTCGCCTTGTTTT
CATACCCACACTACCTCATTCCGTCCTCGACCCACCACGCACCCTGCCTG
CTGATCTGTTCGACAACACGTGACAATGACAAACACGGCTTAGTCGTGTT
CTTGCTCGAAGAAATACCTGTGCCACCACAACAAGACGGCCAGCTTCAAC
ACTCGCAGGCCAAAGAAGGAGGTCATCCACTTCCGAAAGAACGCGAAACG
CCTTCGACACGGTACGGACACACAAGGACAAAGCGACATTGTGTGTGCGG
CCATTGCTTGTAGCTAGTTCACCAACGTGTTTCGATCTCGCGTGGTGCAG
CGAGTTCTTTCCCTACACGGGGAGGTCGAGATGCTCGGGTGGCCGTCCTA
CTCGCATTTTAGCATGTTACATAGGTTGAAGCGTTTCACTCCAATTCAGC
AGTTCCGATGTACATACGAACGCTGTTTTGGGCGGAGGAAATTGGGTGAC
TCGCGTTAGATCTATTTGACAAGCACCTTCTGTTTTGCGATGGCCCGAAA
TGTACGCTATCAACAGGAGGCAGACTAGACGAGTCTGCGGCATGGGAGGA
GAAAGCAGCGGAACTTGACGCGAATCATTTGGATTCCTGGCGAGAAGAGG
TTGCCGCTTCATTGACGGCTAGCGCGTGGGGAGGGAGCAGCAGTGCTCTG
GACCAAGTGAGGATTCAGAGCAACATCTCGCCGGGGCTTCTGACTATCAT
GAGGCAACTCGGGAAGTTGTTCGGGAGGGCTCTTCTAGGCTCCATCGTCA
ACGGGAAGGCGATGTTCCTCAGAACGAACATCAAGGCGTAGATCGAAACG
CACTACATCCTCCTTTTCCCGTGGTCTCGTGATCGGCTGGTTTGGACCGG
AAGGCTTCTATTGGAAGAGAAGATGTGCATATTTTGCTGTTCCGTGCCAT
GATTCGTGTGCTAGGTACCTCTGTATGGTCCTGAAGCTACCACTACTCTC
TGTGGCTTGTGTCTCTTCACCAGCGTGAAATCGAACCCGCCCGAACCTTG
GAAAGTTTGAGTTGCGTCCTGACGGCAACGTACCTTGACCATCTGTCTCC
CATGAGCAGCTTGCCACCCAGCATCAGCGCGAGATTAGCCGGATGGAAAC
GGCGCAGGCAAACGGGTGGACGCTGATGCTGATGCGGCACCAAACCGCTC
GGAGAAACTGTCACAACGTCATCATGGTCGAGCGGAAGAAGGCAAGCAAG
GGAAAACGCTCGGCTGCATTTGTGCGGGTTCTCGCAGCGAGAAATGAATC
TTGCAGTGCTTCCGCACGAACAGCGGAGACAAGAAAAATCTGGGCGCAGT
AACTGAGCATTCGGACCTCTACTGTTGCCTGTGTAGCCTCCCTTGAGAAG
AGGTGCATCGCGAGTGCGTTTTGTGTCACCTCCATTCGTAGCCTTCTTCG
CCGACGTCCTACACACCCAATCCCCAATGTTTGTCAACTTAGCTTCGACA
CGCGTGTAAGAAGAGCGCCGAGGAAAGACATCGACGAGAGATGTTGGGGG
AGGCAGACCCGACAGAAGCAGGGGCCGCACCCTCTGGTGCTACGGACGAG
GCGAGTTGTTTGCACCCACACTACTGCTGTATCCGATTTGTCGTTGCAGT
CATCGTGTTATGTTACTTCAGCTTCGCCTCCCCTGTCCCTGTCACATCAA
TTTTCCTTAGCACAGGTTCTAACCTAACCACTCTTAAAATGAACTTCAAC
ACATTCCCCTTGACTCCCGTCTTGGGTGAGTAGTCCGTCTGTGATGGCAT
GTATAGCTATTGAAACGTGCCGGTGGTCGAAAGGGGTACTAAATAGCTTA
ACAAGCAAAGCAACAATTGAGGACTGTCCCTTCCCGTTCTCCGTCGCGCC
CCCTCATGGCCTGTTGCGCTAAACATACACGCCGACCACGAGCGATAATA
TCGTATCTCTTGTACCTGAAGGACGTCGAGGGTATACTTAAGACCGTCAT
GGAGGACGGGGGTTCAGTCACAGGAGAAGCAGAAGGAAAGGAATCCCAAC
CCAGCGGTGGCGTAGCGGCGGGCCGACCACCAACACGTCCGAGTAGTGCT
CCGCCGGCACGCGGAAAGAGACCGCAGCCGGCCGCCGCCACCACCAGAAA
CATCAACCAGCATGTATCGGAAACTGTGGCAGCGTCACCGTCAGCAACAG
AGAATGCTGGCGAGGGTGAGAATGTTGGCGCAGCGAACGAAGGCGTAGAC
GTCGATGACGACGATTCTTTCGGCAAAGACTCGCACGATCTCCGGTGCTT
CGATGAGCTTGAGGACGAGGCGTGGAAGAACTTTTCCTACGACGATTACC
CCGCCGCCGGTTCGCCGGAGGAACCGGAGTGGATCCACACCCCGTGGTGC
GGGACGAACAGCGGTGACATTCCCGTCCTTGACAAGGTCTCGGGCAGGAA
GGTTCTCGACAGCGATGGGGTACCGATGGTACAGCTTGTGCTACCCACGT
CGGCGGCTTCCGCTCCTCCGTCGTCCGCCTCCTCTGCGGACGGTGTCGAT
GGCAATACCGCTACACAGCCGGTGGTCAGGGGTGGTGACGCTTCCGAAGG
CTTTGGCGACGGGGGGGACAAGGGAGTTATCGCAGAGCATAAAAGAGACG
TTGGCAGCCCCCGCAGTGGCGCACAAGATGGTGCTGACAAAGGAAGGCCG
TGTTCGGCAACTGGAGAGTTGTTTACAGGAGACCCAGCAGCTGCAATATC
GCCCCTTAGTTTTGCCGGGGAGGGGGAGGAGAGGGACAGCCAAGGCGACG
GTGGCGGTAGCGGGAGAAGTCCGGGTAGCGTAGGAGATGGCTTCACGTCG
CCACGGGCTCTGGCCGGGGGCGGCGAGCTGCGGAGGTACAACTGGCTAGG
AGCTGGCGCCGCGCCCACGAAGCCATCGCTCCTCGCGACGAGTCGGATAC
CGTCGGGAAACCGTGCCGACAAGCAAAGGTTCAGAAACGCGAAGAGACAA
GATTCCAACAGAAAGGTGGATGACGCGACGACACAGGATTAG back to topCoding sequence (CDS) from alignment at Scaffold_235:127345..131986+ >EsuBft321_12a-0001 ID=EsuBft321_12a-0001|Name=EsuBft321_12a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1836bp|location=Sequence derived from alignment at Scaffold_235:127345..131986+ (Ectocarpus subulatus male Bft15b)
ATGGCCAAGCTCAAGAAGCTTCAGAAGGAAAGACTGATCGTGGCGCGGCT
AGGCTTTCCCGACAAAGCCATGGAGATCGATGAGCACATCGAAAAAATAC
GCGCGGATCTCAGGAGCGAGCGCGAAAAGGTGGACTCGAGGATTCTCGAG
GAGGAGTTGGCGGCACTAGCCATCCAGCACCGTGAAAAGCTGACTAGCCT
TGAACAAGAGCTTAAGGAAGACGAGCAAAAAGTCAGCAGGTCGTTCGAGC
GGGAAAGGGCTGTGCTCCTGCGAAAGCAGGAGAAGCAGTTTGTTCAGCTT
GTGGATGACGCTATCAAGCGAGCAATCGGCAAGAGCAAGTCGTGTTCTTG
CTCGAAGAAATACCTGTGCCACCACAACAAGACGGCCAGCTTCAACACTC
GCAGGCCAAAGAAGGAGGTCATCCACTTCCGAAAGAACGCGAAACGCCTT
CGACACGGAGGCAGACTAGACGAGTCTGCGGCATGGGAGGAGAAAGCAGC
GGAACTTGACGCGAATCATTTGGATTCCTGGCGAGAAGAGGTTGCCGCTT
CATTGACGGCTAGCGCGTGGGGAGGGAGCAGCAGTGCTCTGGACCAACTT
GCCACCCAGCATCAGCGCGAGATTAGCCGGATGGAAACGGCGCAGGCAAA
CGGGTGGACGCTGATGCTGATGCGGCACCAAACCGCTCGGAGAAACTGTC
ACAACGTCATCATGGTCGAGCGGAAGAAGGCAAGCAAGGGAAAACGCTCG
GCTGCATTTGTGCGGGACGTCGAGGGTATACTTAAGACCGTCATGGAGGA
CGGGGGTTCAGTCACAGGAGAAGCAGAAGGAAAGGAATCCCAACCCAGCG
GTGGCGTAGCGGCGGGCCGACCACCAACACGTCCGAGTAGTGCTCCGCCG
GCACGCGGAAAGAGACCGCAGCCGGCCGCCGCCACCACCAGAAACATCAA
CCAGCATGTATCGGAAACTGTGGCAGCGTCACCGTCAGCAACAGAGAATG
CTGGCGAGGGTGAGAATGTTGGCGCAGCGAACGAAGGCGTAGACGTCGAT
GACGACGATTCTTTCGGCAAAGACTCGCACGATCTCCGGTGCTTCGATGA
GCTTGAGGACGAGGCGTGGAAGAACTTTTCCTACGACGATTACCCCGCCG
CCGGTTCGCCGGAGGAACCGGAGTGGATCCACACCCCGTGGTGCGGGACG
AACAGCGGTGACATTCCCGTCCTTGACAAGGTCTCGGGCAGGAAGGTTCT
CGACAGCGATGGGGTACCGATGGTACAGCTTGTGCTACCCACGTCGGCGG
CTTCCGCTCCTCCGTCGTCCGCCTCCTCTGCGGACGGTGTCGATGGCAAT
ACCGCTACACAGCCGGTGGTCAGGGGTGGTGACGCTTCCGAAGGCTTTGG
CGACGGGGGGGACAAGGGAGTTATCGCAGAGCATAAAAGAGACGTTGGCA
GCCCCCGCAGTGGCGCACAAGATGGTGCTGACAAAGGAAGGCCGTGTTCG
GCAACTGGAGAGTTGTTTACAGGAGACCCAGCAGCTGCAATATCGCCCCT
TAGTTTTGCCGGGGAGGGGGAGGAGAGGGACAGCCAAGGCGACGGTGGCG
GTAGCGGGAGAAGTCCGGGTAGCGTAGGAGATGGCTTCACGTCGCCACGG
GCTCTGGCCGGGGGCGGCGAGCTGCGGAGGTACAACTGGCTAGGAGCTGG
CGCCGCGCCCACGAAGCCATCGCTCCTCGCGACGAGTCGGATACCGTCGG
GAAACCGTGCCGACAAGCAAAGGTTCAGAAACGCGAAGAGACAAGATTCC
AACAGAAAGGTGGATGACGCGACGACACAGGATTAG back to top
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