EsuBft317_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft317_3a-0001
Unique NameEsuBft317_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_499contigScaffold_499:1448235..1459302 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7G1L0
ProteomeIdEsuBft317_3
Protein domainsPTHR24015
Protein domainsCoil
Protein domainsIPR002885
Ownerapollo_admin@sb-roscoff.fr
Notepentatricopeptide repeat-containing protein chloroplastic os:arabidopsis thaliana gn:pgr3 pe:1 [Automatic annotation]
Nb exon8
Max annot lvl2880.D7G1L0|-
Length3558
Hectar predicted targeting categoryother localisation
Evalue1.61e-234
EggNOG OGsKOG4197@1|root,KOG4197@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Descriptionendonuclease activity
COG categoryS
Cross References
External references for this mRNA
DatabaseAccession
GO0071704
GO0044699
GO0044237
GO0044238
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft317_3aEsuBft317_3aEctocarpus subulatus male Bft15bgeneScaffold_499 1448235..1459302 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft317_3a-0001EsuBft317_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_499 1448832..1459302 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft317_3a-0001-exonagat-exon-20816Ectocarpus subulatus male Bft15bexonScaffold_499 1448235..1448951 -
EsuBft317_3a-0001-exonagat-exon-20813Ectocarpus subulatus male Bft15bexonScaffold_499 1449358..1449453 -
EsuBft317_3a-0001-exonagat-exon-20811Ectocarpus subulatus male Bft15bexonScaffold_499 1450301..1450474 -
EsuBft317_3a-0001-exonEsuBft317_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_499 1451455..1451638 -
EsuBft317_3a-0001-exonagat-exon-20812Ectocarpus subulatus male Bft15bexonScaffold_499 1452293..1452492 -
EsuBft317_3a-0001-exonagat-exon-20815Ectocarpus subulatus male Bft15bexonScaffold_499 1454633..1455263 -
EsuBft317_3a-0001-exonagat-exon-20814Ectocarpus subulatus male Bft15bexonScaffold_499 1455484..1456808 -
EsuBft317_3a-0001-exonagat-exon-20817Ectocarpus subulatus male Bft15bexonScaffold_499 1459072..1459302 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft317_3a-0001-exonagat-three_prime_utr-12539Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_499 1448235..1448831 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft317_3a-0001-cdsEsuBft317_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_499 1448832..1448951 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft317_3a-0001 ID=EsuBft317_3a-0001|Name=EsuBft317_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3558bp|location=Sequence derived from alignment at Scaffold_499:1448235..1459302- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGAGAGGGGGGGCAAGGAGGGCGCGGCGGCGGCGGCAGGGGGGTGCG
CAGACGGCGCCCCGGGGAAGGGAGGGGGAGGGGCGCGAGGAGAGGGACCA
ATAAAGGGAGGGCCGCGTTCGCCCGCTCCCGAGACTTCGTGATGAAGATC
AGGGGCATGTCGCGGTGGAACTGGCGAGGGGTGATGCGGGAGCTGGAGGA
GGCGGAAACTGTAGAGGCTAAGTTTGGGGAGGGTCCCAGATCACGGCCTT
CAGGAGCGTTTTTCGTTTTTGGCTCCAGTGAGACTGACGTCTTTTCTTTG
GTCAGCGGGCTAGCACGGGCGATGCTAGTTCAAACGCACACACGAACACA
CACTTGCGACATGACTCTTCAGGCGGAGAAGGGAATGACGGGCGGCAGCG
ACGGCAGAGTCAGCAGCCACGCGTACAACAGCTGCCTCATGCACCTGGCG
AAGTGCTCCCGGTGGCGCGAAGCTCTGGCCGTCTTCGAGAGGATGTGGGC
CCGCGGCGTCACTCCGAACTCCTTTTGCCTAAACGCCACCCTGGAAGCCT
GCACGGCCGCGGGGGAGTGGAAGCAGTGCCTTGGTCTCCTCGAGCGAGCC
AAAGGCGCAGGGCTGGAGGTGAACGAGATCAGCTACAACATCTGCATCGC
CGCGTGCGGTTCCGGCAAGCAGTGGCAGAAGGCCCTCGGCCTGCTGCGAG
AGCTAGAGGCGGCGGGGAGAGCGGGAGCGGTGGTGCCCGGCGGGAGGGTG
CCGCTACGGCCGACGGTCGGCACGTACGGGGCCACGATGCGCGCCCTCGG
GATGTCGGGGAAGTGGCGGGAGAGCATGGAGGTGTTTCGGGAGCTGCAGG
GCCTGGCGGGTCAGGCCCCCGGCGAGGAGAGAGAAGGTGGGAGCGTTATC
GCCGCCCCCGACGTCGTGACCTACACCACCCTCGTGGCCGCGTTGGGCGA
GAACGGCCGCACGTCGGAGGCGAGGCAGGTCTGGCGGGAGATGGAGGAGG
CGGGCGTGGAGCCGAACGCCATCACCTACCACGCCATGATCGCCGCGTAC
GGGAACGCGGCCGCCGCGAAAGCGGCGTCCTCTAGCGCCGCTGCTCGCGC
CGCCGCTGCTAGTAGCGCCGTCGCTGCTCATAGCACCGCTGTTGCTATTG
CCTCTGCTAGCAGCGCCTCCGCCGCCAGCGCTTCTACGTCTGCTAGCGCC
ACCGGGAGGCAGCGGCCGCTGGCGGCGGCTGCCGCGCCTAGCCCGCGGAC
GGCAGACTGGGTCGAGGCCCTAGCTCTCTTCGACCAGATGCCCCGAAAGG
GCATCCGGCACACGCCCACCAGCTACAGCACCGCCATAACCGTGGCCGGC
CAGTGCGGGCTCTGGGAAGAAGCGGTAGCTCTGCTTGACCGCATCAGGCG
AGATCGGAGGGACGACGACGACGAGCGCGGTGCGCAGGGAGCAGCGGCGG
CAGCGGCGGTGGGGCCGAGCGGCCAGCGCGTGGCCGCTAACAACTACGTC
TACGCGGCCACGATTACCGCGTGCGGGAACAACGGGCAGTGGGAGCAGGC
CTTGAGGTTGCTGCGGGAGATGTCCGAGGCGGGGGTCGAGGCCGACGCGC
TAACCTACAGCGCCGCCATCTCCGTGCTCGCGAGGGAGGCCCGGCTCCCG
GAGGCGTTCCGGCTGATCAGAGAGATGTCGGAGCGCGGCCTGGCGACGGT
GAGTGGATCGGCATACGACAGCATCGTCGGGGTGTACGGGAAGACCCCCG
AGGCGGCCGCGGAGCTCGTGGCCCTTGTGAGGGGCATGGACGTGCCCGAC
TTCTTCGCGTACAGCGCCGCGATCGCCGTGTGCGCGGCCGTCGCGGGGGT
TGTGCCGGCCACTCCCTCAGCGGCGGCGACGGCTCAAGCTTTGAAAGACA
GCAACGCGACAAGCGTCGATAGCAACGAGGCGCCAAGCTCGCTGTCGGCG
ACGGCGGCGGCGGACCACCCTTCGACAAACAGCGCAAGAGCTATCGTCCC
AAACGATGGCATCGATGCGCCGCGCTTGCTCCAGGAGATGTCGGCGGCGG
GTCTCCGACCGGACGAGGCGTGCTTCACCAACGCTCTGTCGGCGTGCCGG
GATCGCAGGCAGGGGAAGCAGGCCCTCGCCATCCTCAGAGATATGGAGGC
AGCCGGCGTGACTCCCGACGGGGTCGTGTATACCCTGGTTATGGCGGCGT
GCGGGGGCGCCGGGAGATGGCGAGACGCAGTTTCCCTCGTGCGGGAGATG
ACGGAGAAAGGGGTGCGGCCCAACTTGATCAACTACTCGGTGGCCATCTC
CGCCTGCGCGAAGGCCGGCCGTCACGAGCCGGCGCTGGAGCTCATGGCGG
AGATGAAGGACGCCGGGATCAACCCCAACACCGTCACCTACTCCTCCGCC
ATACTAGCGTGCTCGGCATCTGGCCAATGCGGTGATGCGGTCGGTCTGCT
TAGAGATATGTCGAAGAGGGGAATGTCCCCCTCTCGGACATGCTACGCCC
CTGCGATAACGACATGCGCGCGGGGTAACGAGCCGGATATGGCGCTCTCG
CTTCTGAGGGAGATGCCCACGGTGGGGTTAGTCCCAGACGCGGTGTGTTA
CGCCGCGGCACTGTCAGCGCTGCGAAACGACTGCGACAATTCTGCGGCGG
TGTTGAGGGAGATGAGGGACGGGGGTCTCGCGCCCGCGCCTGGCCTGTAC
GTCGAGGCGGTTAGGGCTTGCAGAAGAGTGAACAAGGAGGAACAGGTTGA
TGCGCTTGCGGAGGAGCTAGCATCGCTGGTCGGTCGAGACCGAGCTTCGA
CTCTCCTTTTACCGGGTGTGTATGTGCATGTGTATGTGTATATTGATATG
TTGGGTCGACCGATCACCTGCGGCGACAAGGCGATGCTGCACCCTGGGAC
ATCCAATGGTCATCGTCACCACACTGCCATGAAGGAAGAGGCGTTTTCAA
TGCAAGGGTGATCGTTCCCTCGTGCTAGGGACAAGTGTAACCGTCATCCT
CCGCCTGCCATACATGTAGGGTTTGTAGGGCGGGGGATTATGCACTATTA
GTGCCCTTCAGAGTTCGGGCAATAAAACTTGAATGACTATAATAGATGAG
GGAGCGAGCATGAATGAAAATCGAGTCGTAGATGAGCGACGATCGTCCAT
GAACCGTTTTCATACGAAGTGTTGCGGTGAGGCCGAAGCCGGGGGGGCGT
TTGTTTGCGCAACCGGGGGTTGTTCACTGTAGCTTACACGCCGTGATTCT
TTCCTTTTTTTTGTCCATGTTTTCACGTAGACGTGGATGTTGAGCTCAGT
TACGTCGTCATTTTTTTCCATGTTGTCGATGCCGTGAAAGCGCCAAGAGC
TGAGAGGGCATACATCATGAAACCACGGGGGGTGGTTGAGTGTTGTCCCC
GGCTTGGCGTTCGTTTGACACACGATCAAACGAGATGTGAAGAAACACCA
CATCACCCCTCGATCGGTCGGTTGTCTACTGCTTTGGGGGCGGGGCCGGG
GCTGGAGAAAGAGCCGTTGTTGGCGAAGTTCCGCCTGCGATGGGTGTGTG
GATTTCCG
back to top

protein sequence of EsuBft317_3a-0001

>EsuBft317_3 ID=EsuBft317_3|Name=EsuBft317_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=986bp
MREGGQGGRGGGGRGVRRRRPGEGRGRGARRGTNKGRAAFARSRDFVMKI
RGMSRWNWRGVMRELEEAETVEAKFGEGPRSRPSGAFFVFGSSETDVFSL
VSGLARAMLVQTHTRTHTCDMTLQAEKGMTGGSDGRVSSHAYNSCLMHLA
KCSRWREALAVFERMWARGVTPNSFCLNATLEACTAAGEWKQCLGLLERA
KGAGLEVNEISYNICIAACGSGKQWQKALGLLRELEAAGRAGAVVPGGRV
PLRPTVGTYGATMRALGMSGKWRESMEVFRELQGLAGQAPGEEREGGSVI
AAPDVVTYTTLVAALGENGRTSEARQVWREMEEAGVEPNAITYHAMIAAY
GNAAAAKAASSSAAARAAAASSAVAAHSTAVAIASASSASAASASTSASA
TGRQRPLAAAAAPSPRTADWVEALALFDQMPRKGIRHTPTSYSTAITVAG
QCGLWEEAVALLDRIRRDRRDDDDERGAQGAAAAAAVGPSGQRVAANNYV
YAATITACGNNGQWEQALRLLREMSEAGVEADALTYSAAISVLAREARLP
EAFRLIREMSERGLATVSGSAYDSIVGVYGKTPEAAAELVALVRGMDVPD
FFAYSAAIAVCAAVAGVVPATPSAAATAQALKDSNATSVDSNEAPSSLSA
TAAADHPSTNSARAIVPNDGIDAPRLLQEMSAAGLRPDEACFTNALSACR
DRRQGKQALAILRDMEAAGVTPDGVVYTLVMAACGGAGRWRDAVSLVREM
TEKGVRPNLINYSVAISACAKAGRHEPALELMAEMKDAGINPNTVTYSSA
ILACSASGQCGDAVGLLRDMSKRGMSPSRTCYAPAITTCARGNEPDMALS
LLREMPTVGLVPDAVCYAAALSALRNDCDNSAAVLREMRDGGLAPAPGLY
VEAVRACRRVNKEEQVDALAEELASLVGRDRASTLLLPGVYVHVYVYIDM
LGRPITCGDKAMLHPGTSNGHRHHTAMKEEAFSMQG
back to top

mRNA from alignment at Scaffold_499:1448235..1459302-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft317_3a-0001 ID=EsuBft317_3a-0001|Name=EsuBft317_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=11068bp|location=Sequence derived from alignment at Scaffold_499:1448235..1459302- (Ectocarpus subulatus male Bft15b)
ATGAGAGAGGGGGGGCAAGGAGGGCGCGGCGGCGGCGGCAGGGGGGTGCG CAGACGGCGCCCCGGGGAAGGGAGGGGGAGGGGCGCGAGGAGAGGGACCA ATAAAGGGAGGGCCGCGTTCGCCCGCTCCCGAGACTTCGTGATGAAGATC AGGGGCATGTCGCGGTGGAACTGGCGAGGGGTGATGCGGGAGCTGGAGGA GGCGGAAACTGTAGAGGCTAAGTTTGGGGAGGTGAGGGAGGCAACACGGA CCGCCCCAGCGAGGATATCATTTTATTTTATCTATTACTGCATACAGTCG AGAGAGGAGTTCGTGGCCCTAACCTCCAACCCACACCGGTAACCCCTACT ATAGCCAAGCTTAATAGCTTCGCGAAGGCTACTCGGGGGCACGGCGTGAA GCAACACGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGG GGGACCAGTAGGCAGTAGTCGACCGGTTTGGATGATTTTTTCGCTTGCTT TTTGTTGCAGAAGACGACTGCGATAACCGCTTCTGAGTCGTGAGCTCACT GGTTCAGGGGCGGTGCTATGTGATGTTATTGTGTGTTTGGCGATGTTGGA GCAGAGAAACATGCCGTGTTTTTTTGGTTTTGTTTCGCGATTCTCGAGCG CACTCCGTCCCGTGAGCTCAATTTTTGTTGGTATATGCACACGCAGCACT CCAAAATGAACACGAGTGCAATTTACCGTAAGGTTGCGGGTCAGCGCACC CCCGTGCGGTCGTTTCTTACACATTTTCGCCATTTCATTCTTATCGCACC CCTGTGCGATGACTCCGGACCGTGCGATGACTCCGCACCCTGTGCGGAAA TTGAATTAAGTCATTTGGTTTCGATGCATGACGCACACCCCTGTGCGATT ACTCCATTTTTTTTTTTTCTCCCATCATTGGACTCTGTCGTCTACCCCTC TGGCCCCTATCCTCCACTTCTACCAGCAAGACGACCCAACCGGGGTCACA TAGGAGGGGGGGGTGGCCCCCCTCCTGCGGTTCCTGCCTGAAATATTTTT ATCGCGAGAAGGGTACAGCAATCCCTTCCCTCGCGACATATGAAGTCGAT CAAGTTTACTAACAACGAGCTTTGCAGCGCGTCGCTTCCAACGGAGACCA GGATTCAATAAGTCTAGTGACAAAAAACTCACTCTGTCGGGACTCGAACC CATGACCTGGCCCTTAGCAGGCTGCGAGTATGTGCAGTCCTGAGTAAATC CTGGAGGCGATACTATCAAGAACTTTCAACGCACACCCCTGTGCGATAAC TCCGGTATGTGGGGTACGTGAAAGAAATAACTTTGCAAACGCACAGACAC CTTAGTTGTGCTGCGGTTGCAGGCTCCACACGCAACGTACACACACACGC GCACGTCAGCCAACCACGGCAGTCAGCCCGATGGATGCTAGCTTTTCGAG AAAGCACACACACACCAGTAGTGGCAGGTTGGCTGCCCGAACACATGCTT TTGTGTGCATCCCAGCAGTACGGAGATTGGCGCTGTTTAGTGTTTCTGGT AGTGACGGGATTCAATTTGTTTCGTAGCGAAAGAAGTAGAAGTTAGGCAC AAAAGTGCTGCTGTTCCATGGTGCTGTTCCACAGTACCTCCTGCTGTTCG TTGTTCTGGCTGATGGCTGCTGTTTTTTTTCTCGTGTGGTATGATCCAAG GGACAATGTTCAAGTTTACCGATCCAATGGAAATACCAATGTGTTTCATT TCCTTCATTCCTCCACGTGTGGTATGCGACGATGACCTACCTACCCATAC AGCAGAGCTCCATGCCAGCATGACATGGTTGCAGGGGTGAAAGTTGCCCC GAAATCGCTGGCACAACCACTACCCTACCTGTAGGTTGCGAGTTATCGCA CCCCCCTGTGCGGTAACTCCGGAGCCTGTGCGGAAATCGAATTGAATAAT TATGCCATTTAATTTTCATCGCACCCCTGTGCGATGACTCCGGACCGTGC GGAAACTCCGGACCGTGCGCTGACCCCCAACCTTACGGTAGCAGACTTCG TAGACACATGCAGTTTTCTGCTGTTGCTACCGTTTCTGTCTTTCGTCCGG AGAATAGCTTAGCCTCCCCCATGTCGCCCTGTCACGGGTTCCCAGATAAT GGCATTTGGAAGTGTTTTTTGTTTCAACCGCACTGAGACTGACGTCTTTT CATTGGTCAGCCGATTAGTGCGATCGATTCTAATAATAAATACATACACA AACACATCACGGGGTCCCAGCTCATGGCCTCCAGAATCGTTTTTGTTTAT GGCCGCACTGAGGCTGACGTCTTTTCTTTGGTCAGCCAGCTAGCACGGTC GATGCTCATTCAAACGCGCGCGCACACACACACGGTAGCAAGCTGTCTTT TGTCCGAAGAGTAGCGTAGACTTCCCTATGACGATCGATCACAGGGTCCC AGATCACGGCCTTCAGGAGCGTTTTTCGTTTTTGGCTCCAGTGAGACTGA CGTCTTTTCTTTGGTCAGCGGGCTAGCACGGGCGATGCTAGTTCAAACGC ACACACGAACACACACTTGCGACATGACTCTTCAGGCGGAGAAGGGAATG ACGGGCGGCAGCGACGGCAGAGTCAGCAGCCACGCGTACAACAGCTGCCT CATGCACCTGGCGAAGTGCTCCCGGTGGCGCGAAGCTCTGGCCGTCTTCG AGAGGATGTGGGCCCGCGGCGTCACTCCGAACTCCTTTTGCCTAAACGCC ACCCTGGAAGCCTGCACGGCCGCGGGGGAGTGGAAGCAGTGCCTTGGTCT CCTCGAGCGAGCCAAAGGCGCAGGGCTGGAGGTGAACGAGATCAGCTACA ACATCTGCATCGCCGCGTGCGGTTCCGGCAAGCAGTGGCAGAAGGCCCTC GGCCTGCTGCGAGAGCTAGAGGCGGCGGGGAGAGCGGGAGCGGTGGTGCC CGGCGGGAGGGTGCCGCTACGGCCGACGGTCGGCACGTACGGGGCCACGA TGCGCGCCCTCGGGATGTCGGGGAAGTGGCGGGAGAGCATGGAGGTGTTT CGGGAGCTGCAGGGCCTGGCGGGTCAGGCCCCCGGCGAGGAGAGAGAAGG TGGGAGCGTTATCGCCGCCCCCGACGTCGTGACCTACACCACCCTCGTGG CCGCGTTGGGCGAGAACGGCCGCACGTCGGAGGCGAGGCAGGTCTGGCGG GAGATGGAGGAGGCGGGCGTGGAGCCGAACGCCATCACCTACCACGCCAT GATCGCCGCGTACGGGAACGCGGCCGCCGCGAAAGCGGCGTCCTCTAGCG CCGCTGCTCGCGCCGCCGCTGCTAGTAGCGCCGTCGCTGCTCATAGCACC GCTGTTGCTATTGCCTCTGCTAGCAGCGCCTCCGCCGCCAGCGCTTCTAC GTCTGCTAGCGCCACCGGGAGGCAGCGGCCGCTGGCGGCGGCTGCCGCGC CTAGCCCGCGGACGGCAGACTGGGTCGAGGCCCTAGCTCTCTTCGACCAG ATGCCCCGAAAGGGCATCCGGCACACGCCCACCAGCTACAGCACCGCCAT AACCGTGGCCGGCCAGTGCGGGCTCTGGGAAGAAGCGGTAGCTCTGCTTG ACCGCATCAGGCGAGATCGGAGGGACGACGACGACGAGCGCGGTGCGCAG GGAGCAGCGGCGGCAGCGGCGGTGGGGCCGAGCGGCCAGCGCGTGGCCGC TAACAACTACGTCTACGCGGCCACGATTACCGCGTGCGGGAACAACGGGC AGTGGGAGCAGGCCTTGAGGTTGGTAGCAGGGGCTCCTGGATTACGTATG TTTAGGCCATTGTTCACCGCTGCTGCTGTTGCAGCCAATGCTTTACTTCT CCCGTCGCCCGGCCCACCGTCCAATCAAAGTTTTCAACATGTGACCAATC AACCCTCCGCAACCGATGCGCGAACATAGCTGATGTTTTGTTTTATAACC TATCGAACCTGCCCCCTCGGCCTCTACACCTGCAACAAGGTTGCTGCGGG AGATGTCCGAGGCGGGGGTCGAGGCCGACGCGCTAACCTACAGCGCCGCC ATCTCCGTGCTCGCGAGGGAGGCCCGGCTCCCGGAGGCGTTCCGGCTGAT CAGAGAGATGTCGGAGCGCGGCCTGGCGACGGTGAGTGGATCGGCATACG ACAGCATCGTCGGGGTGTACGGGAAGACCCCCGAGGCGGCCGCGGAGCTC GTGGCCCTTGTGAGGGGCATGGACGTGCCCGACTTCTTCGCGTACAGCGC CGCGATCGCCGTGTGCGCGGCCGTCGCGGGGGTTGTGCCGGCCACTCCCT CAGCGGCGGCGACGGCTCAAGCTTTGAAAGACAGCAACGCGACAAGCGTC GATAGCAACGAGGCGCCAAGCTCGCTGTCGGCGACGGCGGCGGCGGACCA CCCTTCGACAAACAGCGCAAGAGCTATCGTCCCAAACGATGGCATCGATG CGCCGCGCTTGCTCCAGGAGATGTCGGCGGCGGGTCTCCGACCGGACGAG GCGTGCTTCACCAACGCTCTGTCGGCGTGCCGGGATCGCAGGCAGGGGAA GCAGGCCCTCGCCATCCTCAGAGATATGGAGGCAGCCGGCGTGACTCCCG ACGGGGTCGTGTATACCCTGGTGAGCGTGTGTTCCCGGCTGCCGGGCCCC CTCTTTTCTTCCTTGGTTCGACGCCTCCCCCCCCCCCCGTACTGGGGCAT AGGAAGTGGGTTGAAAAGGCTGGAAGTGATATCGGTAGGATAGATAGACT AGGTAAGACATGATTGAGCCGCCTATGGCAAGGTAGGAAGGAACGATTGG CTATCGGTGGTAGGTCACGGGGGAACAATGCGCCGTCGTCTCGAGGACGC GTCGTCCATGGTCTAACCGCTCAGGCATGCAAAACGTAAGAGTGCGCTCC CCCTATGCTCCGTCCTTTCCAGGACGCGTGGGCAATGTTCTTCTGCAACA AAGGCATGCAGAACATTGGTACCGTAATAGTCGGGGAGTCGGCACCGGGT GCGATCGTTTTTTTGCATGTTTTTTTCTCGGGTTTTTAATCGAACCCCGG TGCCATCTCTCCGACCCCGGTGCGGAAATGCAATTTAATCACTTATTTTA GTTTTTCCAAGGCACCCCGGTGCGATCTCTCCGACCGGTGCCATCCTAGA TGAAATTCACACAGTTCTTGCATGCACGCACGCACCCCGGTGCCATCTCC CCTACCGGTACGATAGTATTGATACCAGTGTAGGCACTCACACGTACGGT CTTCTTCACACGCTAATTGGTCGTGCCATTGATCAGTATAGAACCACACG TACGTGTAGGTACCCTTGTTGCTGATTGGAAGCACACCGGTATCGGCAAC GTAGGCTGGTACGTAACATTTACTTTCCATGCAGCGAGTGGTCTTGTGTT TGATGCGAGTTTGGCTATGGCGTGACAACAAACGATGTCATTTCCATCTG AGGTGGTACCAGAACACACGGTATCAATTGTCTCACGCCTTCGTTTCGGT CTTCTTCTACGGATACAGTAGAGGTCCCTGTTTAGTGCCGGGGTGTGCGC AAAAACTTGACCGGCACTATACCGGGCACCGGCATTTTTCTTCAGAGTGC CTGAATAGTGCCAAAGGGGCACTATTCAGGGTCTGAAAATCCCTCAATAG TGCCAGACCGGCACCATTGACGAACTGTGTGATTTCAGAGTGCAGCGCTT TGCTTGGCGGGGCCAACAGAGTACCACATGAAACGTACATGGTGAGATCA TGGCATGGGCGTCGCGGGCAGACTGCTGTGCCACGATAGGGGTGGTTCCT GCCCTGTCGAACACACATATTTTGCTTAATAAGTTAACTGGACGGGACAC ACATGCTGTACCTTGTTGCTGTACCCACCTCAGCGCACGCACACCTGCAC AACCTGACTTAAATCCCTTCACATGAAAATCGCGGATGCACCTCATAGAT GTCCAATATTTTGTTGGCACCTTCCGCACATGGCATGGTGCGCATCTGCG TAGAGCTGTTCGGGTCTGTAGCAGCACGTGTACCCTTTCCTCTGTGTCTG TCTTCTGTGTTGTGTGAGTCTCTTGTGTGTTGTGTGTGCGTGCGTGCTTG AACCGGCGCTATTGTGGGGTTCAGTGGGGCCCGAACCGGCACTATAGTGG GCAGCCCTGAATAGTGCCGGTTCCGGCACTATTCAGGGCGGGTTCTGTGC GCCGAGATTTGACCGGCACTATACCGGCAACCGGCACTATTCAACCGGCA CTAAACAGGGACCTCCTCTGTACCAGTACGTACACAGCAGTACAATAGTT TCGGGTTGTGTAAGGTGGGGTAGGGTGCGAGTTGTACGTTGTGTGTTTGG TTGAGTGTACGGTTGGTAACGTCTTTTATAATGAAGCAACTGGCATCCCG CGTGAACCACAACCATCCAATCGTACACATGGGAGTGGCGCTCCGCTGAC ACCCTCCCCACGTGTAAAAGGTACGCACATATACCTCACTCCGGCAGCTG AAAAGGAGCTCAATCTTGGATTTGGGGGTCGGAGAGATCGCACCCGGTGC GATCTCTCGGACCGGTGCCATCTCTCGGACCGGTGCCATCTCTCCGGCCG GTGCCAACTCATCGACTATTACGGTACATCCCCCTCTCCCGTGTTATGAA AGAGTGTCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNCCGGCAGGTTATGGCGGCGTGCGGGGGCGCCGGGAGATGGCGAGACG CAGTTTCCCTCGTGCGGGAGATGACGGAGAAAGGGGTGCGGCCCAACTTG ATCAACTACTCGGTGGCCATCTCCGCCTGCGCGAAGGCCGGCCGTCACGA GCCGGCGCTGGAGCTCATGGCGGAGATGAAGGACGCCGGGATCAACCCCA ACACCGTCACGTGAGAGAGACAAGACAGACAGAAATAGAGGGAGAGAGAG GGGGGGGGAAGGGGGCGCAGAATAGTCGATTTTTCGTGTGTGTTTTTGGC GCACCACGTGCATACTGCCGTGTGAAGTTAAGGTTATTTTTGGTTGCGGT GAGATGGTGTTAATTTTGTTGCTTGTTTCTGGGGGGCACTGCACGTTTGC GGCGGTGTGGGTGTTTTTTTTGCTGAACTTGATCTGTTTTCCGGCCTTTT TTTTGTGTTTCCTCCCGTTCTTTCCTTCTGTCCCTGTTTAGGGAGCCCTG CTACGTGTAGCTGTGTATGCTGCCTCTGCTTTTTCGTATTTTTTCTGTTC TTGTTTTTTGTTTGTCCGCCGTCATCCTCGGCGCGCCCCCCGGGTGCGGG TTCTGAATATATCTGTTTCTCCGGATGTTGCCCCTTTTGTTCTTCTTGCC CTGTCTCTGTGTGCGCCGCCTTGCTCTGCGCTTACGCCCTGGTGTGTTGC GGTTTATATCCTCCGTTGTGTGCATTCGCGCTGCTCTGGTCGCTCTACGT GGCAAGCATCGTGTGTACTTGCACTGATGTTCCGGTTTGTGATGGCGTCT TGCCCTCCTCTTTCCCCTCCCTCCCGGTGTCAACCGTACCTGGCCGTCTC TCAAATCTCTCCAGCTACTCCTCCGCCATACTAGCGTGCTCGGCATCTGG CCAATGCGGTGATGCGGTCGGTCTGCTTAGAGATATGTCGAAGAGGGGAA TGTCCCCCTCTCGGACATGCTACGCCCCTGCGATAACGACATGCGCGCGG GGTAACGAGCCGGATATGGCGCTCTCGCTTCTGAGGGAGATGCCCACGGT GAGAGATAGAGAGAGCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA GAGAGAGAGAGAGAGAGACGTAGCATGAGCTTCTTTGAAAACAAAAAATC CAACACACCGGGGTTCTTACTCTCGTCTCCTCACAGATCACGTGATCTCG GACAACGACGATGCCGTCCACGGGAGTCCGGCTGGCTTGCAGCTGGTCGC AAGTGTANTACAAAGAGAGGCAAAGAGAGAAAGGAGCAGGCGGTGAGACA GAGTGATACACAGAGAACGAGGAAACGGCACAGAGAAAAGAGACAGGGAG GGACAGAGACAACGACGGAGACACACCCACACCCACACAGAGATGCCGTT TTTGTCCTTCTGTCCACTTCCGAAATAATACACACGCACCATCTGACTCA CCTCTCTCGAGACCCCCGTGTTTTCCATTCGTTTACCGGAGTGTTGACAT CATTTTGATCTCACACTCATCGCCGTCGCTCTTCACACACAGCGCTCTTT GCCGTTGGCTACCTGTAGCCATGGACCCGGTCACGTTTAAACACGCCTAC CTCAAACCACAGTGTCACACACTCCTCCCATCGTCTCCAACAACCGCCCC TCAGCAAGAAGTGATATCGGCAGGATAGGCAATAAAGGGAAAACATTTTT GAGACACCTTTGGCAATTGTAGGAAGGAGCGATTGGCCATGTGATCGGTC CTGTGGGAACAGCAATGCTCCGTCCTCTCGAGGACGCGCTTGGTAAACGG TCTTAACAGTTAAGGCAGGCAAAGCCTGAGTTGACCTTCCTTCCGAAACC CGGTGACATCTAGCCGGCCGCCGCTCGTCCACCCACCCCAAACCCTTGCA TGGCCTTCAACAACCGCCCTATCCTCCCTTCCAAAGCCAGGCGATAGAAA GCCGACGGCACCTCCACCCATACGTTATCCCGGGCCCCCGCCCCCATGTC GGTGGGATTTGTGATACCGCTGTCGTAGGTGGGGTTAGTCCCAGACGCGG TGTGTTACGCCGCGGCACTGTCAGCGCTGCGAAACGACTGCGACAATTCT GCGGCGGTGTTGAGGGAGATGAGGGACGGGGGTCTCGCGCCCGCGCCTGG CCTGTACGTCGAGGCGGTTAGGGCTTGCAGAAGAGTGAACAAGGAGGAAC AGGTGAGAGGGGGAGGGGGCTTGTACTCATAGCCGCGCATACTGCTGTGG TCGTTAGACCGTTGGCCTTGCATACCTACAATGCCGGCGCAGGCCGGGTC TTCACCGGACCAGGCTCGCACGTCAGCAAGCGCCGTGAGGTATAGGGGGA TATCATGTATTTGTATGCCTTAGCTGTTAGACCACTGCGTCCGAGAGGAC GGAGCTTTGTTCCAACAGGAATGGTCACCGATGGCACAATCGTTCCTTCC TGCACTTTGCCCAAGGTGGCTCAGATTGTTTTTTTCCCTAGTTGTATGCT ATCGACATCACTTCTCGTCTTTTCAGTCCGTTCCTGAAACTCTTGGGCGG GGTGAAAGGGTCGTGAGTGGATAAGAGTGTGGATTTAGGGTCAGTGGTTG AGTGTCGGGGCTTGCGTTTGAGTCTGGTACATCAAGTGAAGGACCTAGGT CAGGAGCGGCATTGGTTTGTAAGCACGAAATACGCACACATTTGTTCTCT CCAGCAAAGCTGCCGGGGGCGTCTCCAGGAAGGCTGGTGTGGGCTTGTCA TGCCCGTCATATTCCTGAGTTAACCCGCGGAGACGACGTATGCATAGGTG TTTCACCCGCTGAGGGGCGTATCTGTGATCTCGACGGCGTCCTCTCATGC CCCCAGCACTTTTTTTTTTTACTGCCGCTGTCCGTGTGAATGTCGGTATT GCACAACCCAACCCCTACTTGTCTATGTTTCTCGTTATCCTGACTGCTGC CGCTGTGAGGGTTGATCGGCCCTACGAATCTCGTCCGACAATTCCGCTTC GATATCGACCGCTCGATTGTCGGTAACTTTGGTTTTCAACTTTGACCAGG TTGATGCGCTTGCGGAGGAGCTAGCATCGCTGGTCGGTCGAGACCGAGCT TCGACTCTCCTTTTACCGGGTGTGTATGTGCATGTGTATGTGTATGTATA TGTGTTTGTTTAGTCTATGTGTTTGATTTGGTAGCATCGACCGCGCAATC CGGCTGACCAATGAAAAGACGTCGGTCTCAGTGCGGTTGAAAACGCAAGA TCGTTCTAAAGGCGGTGATGTGGGACCCCGTGAGGGGGCGTCATGGGGGA GGCTAGGCTATGTGTGTTCGTATGCTTTTTGTTGTTATCGGGACACCAGC CGAGCTAGACAGCTGGCCGAATGCAAAAGTATTGACATTTTCTTTTTCGT CTTATCCCTTGTTTATTTTCAGTTCGCTGCCTTGCGTGTTGTCTCTCCCC CGTTGTCCTGATCATCGCCCCGTCTCCCTCTCGTCGCCCCGCCCCGCACG CATGCGCGTCCGTCGTTACTGTGCCCCATCACAAAATGCCACACCCACAA GATTGATATGTTGGGTCGACCGATCACCTGCGGCGACAAGGCGATGCTGC ACCCTGGGACATCCAATGGTCATCGTCACCACACTGCCATGAAGGAAGAG GCGTTTTCAATGCAAGGGTGATCGTTCCCTCGTGCTAGGGACAAGTGTAA CCGTCATCCTCCGCCTGCCATACATGTAGGGTTTGTAGGGCGGGGGATTA TGCACTATTAGTGCCCTTCAGAGTTCGGGCAATAAAACTTGAATGACTAT AATAGATGAGGGAGCGAGCATGAATGAAAATCGAGTCGTAGATGAGCGAC GATCGTCCATGAACCGTTTTCATACGAAGTGTTGCGGTGAGGCCGAAGCC GGGGGGGCGTTTGTTTGCGCAACCGGGGGTTGTTCACTGTAGCTTACACG CCGTGATTCTTTCCTTTTTTTTGTCCATGTTTTCACGTAGACGTGGATGT TGAGCTCAGTTACGTCGTCATTTTTTTCCATGTTGTCGATGCCGTGAAAG CGCCAAGAGCTGAGAGGGCATACATCATGAAACCACGGGGGGTGGTTGAG TGTTGTCCCCGGCTTGGCGTTCGTTTGACACACGATCAAACGAGATGTGA AGAAACACCACATCACCCCTCGATCGGTCGGTTGTCTACTGCTTTGGGGG CGGGGCCGGGGCTGGAGAAAGAGCCGTTGTTGGCGAAGTTCCGCCTGCGA TGGGTGTGTGGATTTCCG
back to top

Coding sequence (CDS) from alignment at Scaffold_499:1448235..1459302-

>EsuBft317_3a-0001 ID=EsuBft317_3a-0001|Name=EsuBft317_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=2961bp|location=Sequence derived from alignment at Scaffold_499:1448235..1459302- (Ectocarpus subulatus male Bft15b)
ATGAGAGAGGGGGGGCAAGGAGGGCGCGGCGGCGGCGGCAGGGGGGTGCG
CAGACGGCGCCCCGGGGAAGGGAGGGGGAGGGGCGCGAGGAGAGGGACCA
ATAAAGGGAGGGCCGCGTTCGCCCGCTCCCGAGACTTCGTGATGAAGATC
AGGGGCATGTCGCGGTGGAACTGGCGAGGGGTGATGCGGGAGCTGGAGGA
GGCGGAAACTGTAGAGGCTAAGTTTGGGGAGGGTCCCAGATCACGGCCTT
CAGGAGCGTTTTTCGTTTTTGGCTCCAGTGAGACTGACGTCTTTTCTTTG
GTCAGCGGGCTAGCACGGGCGATGCTAGTTCAAACGCACACACGAACACA
CACTTGCGACATGACTCTTCAGGCGGAGAAGGGAATGACGGGCGGCAGCG
ACGGCAGAGTCAGCAGCCACGCGTACAACAGCTGCCTCATGCACCTGGCG
AAGTGCTCCCGGTGGCGCGAAGCTCTGGCCGTCTTCGAGAGGATGTGGGC
CCGCGGCGTCACTCCGAACTCCTTTTGCCTAAACGCCACCCTGGAAGCCT
GCACGGCCGCGGGGGAGTGGAAGCAGTGCCTTGGTCTCCTCGAGCGAGCC
AAAGGCGCAGGGCTGGAGGTGAACGAGATCAGCTACAACATCTGCATCGC
CGCGTGCGGTTCCGGCAAGCAGTGGCAGAAGGCCCTCGGCCTGCTGCGAG
AGCTAGAGGCGGCGGGGAGAGCGGGAGCGGTGGTGCCCGGCGGGAGGGTG
CCGCTACGGCCGACGGTCGGCACGTACGGGGCCACGATGCGCGCCCTCGG
GATGTCGGGGAAGTGGCGGGAGAGCATGGAGGTGTTTCGGGAGCTGCAGG
GCCTGGCGGGTCAGGCCCCCGGCGAGGAGAGAGAAGGTGGGAGCGTTATC
GCCGCCCCCGACGTCGTGACCTACACCACCCTCGTGGCCGCGTTGGGCGA
GAACGGCCGCACGTCGGAGGCGAGGCAGGTCTGGCGGGAGATGGAGGAGG
CGGGCGTGGAGCCGAACGCCATCACCTACCACGCCATGATCGCCGCGTAC
GGGAACGCGGCCGCCGCGAAAGCGGCGTCCTCTAGCGCCGCTGCTCGCGC
CGCCGCTGCTAGTAGCGCCGTCGCTGCTCATAGCACCGCTGTTGCTATTG
CCTCTGCTAGCAGCGCCTCCGCCGCCAGCGCTTCTACGTCTGCTAGCGCC
ACCGGGAGGCAGCGGCCGCTGGCGGCGGCTGCCGCGCCTAGCCCGCGGAC
GGCAGACTGGGTCGAGGCCCTAGCTCTCTTCGACCAGATGCCCCGAAAGG
GCATCCGGCACACGCCCACCAGCTACAGCACCGCCATAACCGTGGCCGGC
CAGTGCGGGCTCTGGGAAGAAGCGGTAGCTCTGCTTGACCGCATCAGGCG
AGATCGGAGGGACGACGACGACGAGCGCGGTGCGCAGGGAGCAGCGGCGG
CAGCGGCGGTGGGGCCGAGCGGCCAGCGCGTGGCCGCTAACAACTACGTC
TACGCGGCCACGATTACCGCGTGCGGGAACAACGGGCAGTGGGAGCAGGC
CTTGAGGTTGCTGCGGGAGATGTCCGAGGCGGGGGTCGAGGCCGACGCGC
TAACCTACAGCGCCGCCATCTCCGTGCTCGCGAGGGAGGCCCGGCTCCCG
GAGGCGTTCCGGCTGATCAGAGAGATGTCGGAGCGCGGCCTGGCGACGGT
GAGTGGATCGGCATACGACAGCATCGTCGGGGTGTACGGGAAGACCCCCG
AGGCGGCCGCGGAGCTCGTGGCCCTTGTGAGGGGCATGGACGTGCCCGAC
TTCTTCGCGTACAGCGCCGCGATCGCCGTGTGCGCGGCCGTCGCGGGGGT
TGTGCCGGCCACTCCCTCAGCGGCGGCGACGGCTCAAGCTTTGAAAGACA
GCAACGCGACAAGCGTCGATAGCAACGAGGCGCCAAGCTCGCTGTCGGCG
ACGGCGGCGGCGGACCACCCTTCGACAAACAGCGCAAGAGCTATCGTCCC
AAACGATGGCATCGATGCGCCGCGCTTGCTCCAGGAGATGTCGGCGGCGG
GTCTCCGACCGGACGAGGCGTGCTTCACCAACGCTCTGTCGGCGTGCCGG
GATCGCAGGCAGGGGAAGCAGGCCCTCGCCATCCTCAGAGATATGGAGGC
AGCCGGCGTGACTCCCGACGGGGTCGTGTATACCCTGGTTATGGCGGCGT
GCGGGGGCGCCGGGAGATGGCGAGACGCAGTTTCCCTCGTGCGGGAGATG
ACGGAGAAAGGGGTGCGGCCCAACTTGATCAACTACTCGGTGGCCATCTC
CGCCTGCGCGAAGGCCGGCCGTCACGAGCCGGCGCTGGAGCTCATGGCGG
AGATGAAGGACGCCGGGATCAACCCCAACACCGTCACCTACTCCTCCGCC
ATACTAGCGTGCTCGGCATCTGGCCAATGCGGTGATGCGGTCGGTCTGCT
TAGAGATATGTCGAAGAGGGGAATGTCCCCCTCTCGGACATGCTACGCCC
CTGCGATAACGACATGCGCGCGGGGTAACGAGCCGGATATGGCGCTCTCG
CTTCTGAGGGAGATGCCCACGGTGGGGTTAGTCCCAGACGCGGTGTGTTA
CGCCGCGGCACTGTCAGCGCTGCGAAACGACTGCGACAATTCTGCGGCGG
TGTTGAGGGAGATGAGGGACGGGGGTCTCGCGCCCGCGCCTGGCCTGTAC
GTCGAGGCGGTTAGGGCTTGCAGAAGAGTGAACAAGGAGGAACAGGTTGA
TGCGCTTGCGGAGGAGCTAGCATCGCTGGTCGGTCGAGACCGAGCTTCGA
CTCTCCTTTTACCGGGTGTGTATGTGCATGTGTATGTGTATATTGATATG
TTGGGTCGACCGATCACCTGCGGCGACAAGGCGATGCTGCACCCTGGGAC
ATCCAATGGTCATCGTCACCACACTGCCATGAAGGAAGAGGCGTTTTCAA
TGCAAGGGTGA
back to top