Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft3167_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 126 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft3167_3a-0001 ID=EsuBft3167_3a-0001|Name=EsuBft3167_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1262bp|location=Sequence derived from alignment at Scaffold_347:53115..55366+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAATGGATGCGGAGCGCTGTTTTCGGCGAGGACACCCCATCACCTGA
CAGGGTTATTACGAGGCTGTTACGGCGGGCGGCGAGGAGAAAGAGGACAG
CGATGATGCAGGAACACATCGCGAGATGCATCCAGGGCGCAAAAGATGAC
GACCCCTCCGTACAAAATCTTAGGGTTTACGTGCGGAGCCAATTCGCGAG
CTGTCTTCGCGGAGACCTAGACGGCGTCAAGAAAAAGGTGTGGGAGAGGG
TGGACCCCCTCTTCTTCGAGGGACGTAGATGCTGACTCGGCCCGCTTTGC
AAGAAGGTCAAAGATCTTCCCCCGACCACGCGCTTGATTACCGACGCTTG
GAACGGCCACGTTGACGAAGTCGCCGCCTTAGAATACCGCAAGGCTGATA
CTAAGGCGGCGACTGCGTTCACCTTGACCCGCTTTGCTGGCTGGGAGGGT
AGACTCCGGGCGTGGATAAGTCAGCCGGAAGTGTTGGAGGCAGGGTTGCG
AAACCACCAGGAAGAGAAGGCGTTGCACTACGTATCCTGCATCATCAATC
ACGTGGAGGAGTTGTACAAGGTGTACGTGAAAGAGCGCAAGGATTCCGTG
GCCGTGGAGCTCTCTTACCCGAGTGAAAGGTATCAGATCACAAAACCGCG
CGGGCAAGTCCTGTACTACATTGCCGGGTGGGCGGCCAGCAATGCTTGGG
CGCATCAAAGAAGACACAACCTTTCCCAGGATTGGGTACGTGTCGTCCAA
CACAACACTCGCCGGTCCAGTGGGGAGGCGATATGTACTGATTCTTTGCT
GAGAGATTTCGTAGCAAAAGTCGATTCGAAGAACGATATGAAGAACGGTC
CGGGACTTCTTTACCCTACGATGGAGTGGGTAGAGTTCGTGTATGCTGTG
GAGAGGGGCATATTCCATTTTTTGAAAAACCCCATCTTCCTTGCTGCTTG
CGTCGGAGACTTGCCAGCCGAGATTGTCAAAGTAGTAAGCGAGGCGGAGG
TTCTCAAGGAAGTGTGGGGAAACTGCTGCCCCCTGGTCCTCCTGCCATCG
ATCCTAGTGTATCTCAGGAGATGTTTCTTTTCGTTGTCGGGAAAATCCTC
AACGTGCGAATGGGTGACTTCGCGAAGAGTGTAAGGGAGAATACTTCCCT
CAAGTTCTCGAAGACCGCGCCTGCTTTGCGGCAACAGCTGAACGCGCGTG
TCGGGCCTAATGGAGGGGCGGGGGCCGGTAGTGGCGAAGCAACGGGGGTT
GCACAGGGGGGC back to topprotein sequence of EsuBft3167_3a-0001 >EsuBft3167_3 ID=EsuBft3167_3|Name=EsuBft3167_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=94bp
MEWMRSAVFGEDTPSPDRVITRLLRRAARRKRTAMMQEHIARCIQGAKDD
DPSVQNLRVYVRSQFASCLRGDLDGVKKKVWERVDPLFFEGRRC back to topmRNA from alignment at Scaffold_347:53115..55366+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft3167_3a-0001 ID=EsuBft3167_3a-0001|Name=EsuBft3167_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2252bp|location=Sequence derived from alignment at Scaffold_347:53115..55366+ (Ectocarpus subulatus male Bft15b)
ATGGAATGGATGCGGAGCGCTGTTTTCGGCGAGGACACCCCATCACCTGA
CAGGGTTATTACGAGGCTGTTACGGTGAGAATTTACCGCGGGAAATGTTG
ATGGCGTCCATTGTCGTGTTGTAGTCCATGACACTTTTGCAATATTTTTC
TCTCCGTCTTCGTTCTCTTGAATTGCCTGGCTGGTGTGGTGACTTCGCGC
CTAGTTCCCCCACTTGTCTCAATGCCCGTAACTTACATGGTTGCGGTCAT
CGATATTGAGTCGTCTCCGCGACAGCAGTTATCGTCATATAGATCGCGCC
GTTCGTAACGCTTTGGCATTCTCGCACACTGATGACAGGCGGGCGGCGAG
GAGAAAGAGGACAGCGATGATGCAGGAACACATCGCGAGATGCATCCAGG
GCGCAAAAGTAAGCTGAAGCCTGGGTTACCTAAGCGTCGAACGAGCCTCA
GCAGTGACTACAAGAGTGCATTTTCTGTGTGATGTTTTCATACGTTGTTC
TGCGGGGTGTTGCCCCGTCGGTGATGACCGCTTGATGTATCGCCCTGTTC
ATACTCCGACGTCATTTCCGCAAAGTTGAACTCTCCGGATGCTCCCGAAG
AAAACAGAGTGATGTTCGGGTGAGATCGCCATGTAGATCGTAGTCTGCTC
GCGCAATTTATGCTAAACACGGAGTATCAGCCAATGTTTCCAGTTGGCGT
GAACTCGCAGAGTCGTATCAGCTTTCGTCGTTTAGTTGAACGACTGATCA
ACATAGCAACGAGGGCCTATTGGTTACAAGCTGTTCACCCGCGCATTTTG
TGATTGTCCACGGCCGTCTGGATCACCATGCGGCAGGATGACGACCCCTC
CGTACAAAATCTTAGGGTTTACGTGCGGAGCCAATTCGCGAGCTGTCTTC
GCGGAGACCTAGACGGCGTCAAGAAAAAGGTGTGGGAGAGGGTGGACCCC
CTCTTCTTCGAGGGACGTAGATGCTGACTCGGCCCGCTTTGCAAGAAGGT
CAAAGATCTTCCCCCGACCACGCGCTTGATTACCGACGCTTGGAACGGCC
ACGTTGACGAAGTCGCCGCCTTAGAATACCGCAAGGCTGATACTAAGGCG
GCGACTGCGTTCACCTTGACCCGCTTTGCTGGCTGGGAGGGTAGACTCCG
GGCGTGGATAAGTCAGCCGGAAGTGTTGGAGGCAGGGTTGCGAAACCACC
AGGAAGAGAAGGCGTTGCACTACGTATCCTGCATCATCAATCACGTGGAG
GTGGGTTGATACGGTATTCAGTTAGCGAGTGGGGCATTTGTGGAAGGGCT
TGCGTGTCATCTCCGCATCCGTGTGTGAACAAGTCAAAACTTCCATCCTC
CTGCATCTGCACGTTACTGCGGTGATTGTAGGTTTGAGAAAGCGCGCCGT
GTGTTTATGTCTGGTAGGAATAGGTGTGTTGATCAACCATCCAATTTCAT
GTTGTTGATGTGTATTCCACGGCCAAGTAGCTGAGGTACTCTCCCCATGC
CCGCGCTCCTCTGATCGAACCGTTCCCCATCCCCTCCCCTTAATGCAGGA
GTTGTACAAGGTGTACGTGAAAGAGCGCAAGGATTCCGTGGCCGTGGAGC
TCTCTTACCCGAGTGAAAGGTATCAGATCACAAAACCGCGCGGGCAAGTC
CTGTACTACATTGCCGGGTGGGCGGCCAGCAATGCTTGGGCGCATCAAAG
AAGACACAACCTTTCCCAGGATTGGGTACGTGTCGTCCAACACAACACTC
GCCGGTCCAGTGGGGAGGCGATATGTACTGATTCTTTGCTGAGAGATTTC
GTAGCAAAAGTCGATTCGAAGAACGATATGAAGAACGGTCCGGGACTTCT
TTACCCTACGATGGAGTGGGTAGAGTTCGTGTATGCTGTGGAGAGGGGCA
TATTCCATTTTTTGAAAAACCCCATCTTCCTTGCTGCTTGCGTCGGAGAC
TTGCCAGCCGAGATTGTCAAAGTAGTAAGCGAGGCGGAGGTTCTCAAGGA
AGTGTGGGGAAACTGCTGCCCCCTGGTCCTCCTGCCATCGATCCTAGTGT
ATCTCAGGAGATGTTTCTTTTCGTTGTCGGGAAAATCCTCAACGTGCGAA
TGGGTGACTTCGCGAAGAGTGTAAGGGAGAATACTTCCCTCAAGTTCTCG
AAGACCGCGCCTGCTTTGCGGCAACAGCTGAACGCGCGTGTCGGGCCTAA
TGGAGGGGCGGGGGCCGGTAGTGGCGAAGCAACGGGGGTTGCACAGGGGG
GC back to topCoding sequence (CDS) from alignment at Scaffold_347:53115..55366+ >EsuBft3167_3a-0001 ID=EsuBft3167_3a-0001|Name=EsuBft3167_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=285bp|location=Sequence derived from alignment at Scaffold_347:53115..55366+ (Ectocarpus subulatus male Bft15b)
ATGGAATGGATGCGGAGCGCTGTTTTCGGCGAGGACACCCCATCACCTGA
CAGGGTTATTACGAGGCTGTTACGGCGGGCGGCGAGGAGAAAGAGGACAG
CGATGATGCAGGAACACATCGCGAGATGCATCCAGGGCGCAAAAGATGAC
GACCCCTCCGTACAAAATCTTAGGGTTTACGTGCGGAGCCAATTCGCGAG
CTGTCTTCGCGGAGACCTAGACGGCGTCAAGAAAAAGGTGTGGGAGAGGG
TGGACCCCCTCTTCTTCGAGGGACGTAGATGCTGA back to top
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