EsuBft3135_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft3135_2a-0001
Unique Name	EsuBft3135_2a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_106:77875..80522-
coding sequence from alignment at Scaffold_106:77875..80522-

spliced messenger RNA

>EsuBft3135_2a-0001 ID=EsuBft3135_2a-0001|Name=EsuBft3135_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2648bp|location=Sequence derived from alignment at Scaffold_106:77875..80522- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGTATCCAACAGCAATGTTCGCAGACTCACGAACAGCTTTTGGAACCTT
CAAGAAGGAGGTGAGTAAAGTGCTGCAAGACTACTACCACGCAAACGGCG
GGTTGTTACCGCTGAAGCGTGACGTGCCCGGCGTGATCGCGGCGGCTTGG
CAAAAGAGCTTGACACCGGAGCGGAACAAAGCATCCTTCGGCGGGGCGGG
GCTGTGGNGGGCGGGGCTGTGGCCTGTGGACATGGATCGAGCGCTGACCC
GGCTTCAGGGCACGGCGAAGAGGAAAGAGGGACCGACCGGGCGCCCACCC
CTAGAGGACGTCCCCATCGCCATGTCCCACGAGCAGCTGGAAGAGGCCAT
CGGAGAGAGGGGCCTGAGGCAGTTGAAGGCGGGAGGACATACCATTACCG
GACTCAAGGTAGGCACGGTGATGCTCGGCGGTCTCTTGACTCAGAGGAAG
TGCGCCAAGAAACTGGCTCTTTGGGCCTTCCCGACGGAGGCAACATCAAC
TCGGAAGAATTCCTGGCAAAGGTTGACGCAAAGGAACGCGCAGACAAGGC
AGAGACCGAGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNCGAGAGAGATGACCAACCCATTACATTTGAACACACGAACACCCAC
ATATCGGTGATGGAACCTCAACCACACGCCTTACCTACGACCGACCACGT
CAGGAGGCAATGATGAAAGAATGTTCTCCCGTGCCCTTCGCACATTTATG
GGCATGAAATTACACAAAACTGGGAGACCACTCCCGTGTGCCGCACAATT
TGACACAGATGCATGCATATGCATACCAAACTCAATTACTTACCAAATCA
TATTCCTCGCGTTAAATGCATACCAAACTGGAAATACACGTGTAAAATGG
ATGGAGATCCACAACCAACAGGGTGCCACACATAAAACACCCGACTAACT
AACAGCCCAACACTTTTCGTCTACACCTTCCCAACATAACATATATAAGA
CACACAACACAGCTACCAAACTGTCTTGTTGAGCCTGTTATCCGCAGGGG
AGATGTCCATATATGCTGTCTGGGAAATCGTGGACACACAACAGGTAGTT
TTCTTTGACGCTATGATTCCATTGCTAATCTGTCTTTGACTCTTTTCTCT
GACGGAGATGGACTCGTTGTGTTGTATTTGGAAAAATAAAAAAAAAAA

protein sequence of EsuBft3135_2a-0001

>EsuBft3135_2 ID=EsuBft3135_2|Name=EsuBft3135_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=189bp
MYPTAMFADSRTAFGTFKKEVSKVLQDYYHANGGLLPLKRDVPGVIAAAW
QKSLTPERNKASFGGAGLWXAGLWPVDMDRALTRLQGTAKRKEGPTGRPP
LEDVPIAMSHEQLEEAIGERGLRQLKAGGHTITGLKVGTVMLGGLLTQRK
CAKKLALWAFPTEATSTRKNSWQRLTQRNAQTRQRPRRX

mRNA from alignment at Scaffold_106:77875..80522-

Legend: exonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft3135_2a-0001 ID=EsuBft3135_2a-0001|Name=EsuBft3135_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2648bp|location=Sequence derived from alignment at Scaffold_106:77875..80522- (Ectocarpus subulatus male Bft15b)
ATGTATCCAACAGCAATGTTCGCAGACTCACGAACAGCTTTTGGAACCTT
CAAGAAGGAGGTGAGTAAAGTGCTGCAAGACTACTACCACGCAAACGGCG
GGTTGTTACCGCTGAAGCGTGACGTGCCCGGCGTGATCGCGGCGGCTTGG
CAAAAGAGCTTGACACCGGAGCGGAACAAAGCATCCTTCGGCGGGGCGGG
GCTGTGGNGGGCGGGGCTGTGGCCTGTGGACATGGATCGAGCGCTGACCC
GGCTTCAGGGCACGGCGAAGAGGAAAGAGGGACCGACCGGGCGCCCACCC
CTAGAGGACGTCCCCATCGCCATGTCCCACGAGCAGCTGGAAGAGGCCAT
CGGAGAGAGGGGCCTGAGGCAGTTGAAGGCGGGAGGACATACCATTACCG
GACTCAAGGTAGGCACGGTGATGCTCGGCGGTCTCTTGACTCAGAGGAAG
TGCGCCAAGAAACTGGCTCTTTGGGCCTTCCCGACGGAGGCAACATCAAC
TCGGAAGAATTCCTGGCAAAGGTTGACGCAAAGGAACGCGCAGACAAGGC
AGAGACCGAGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNCGAGAGAGATGACCAACCCATTACATTTGAACACACGAACACCCAC
ATATCGGTGATGGAACCTCAACCACACGCCTTACCTACGACCGACCACGT
CAGGAGGCAATGATGAAAGAATGTTCTCCCGTGCCCTTCGCACATTTATG
GGCATGAAATTACACAAAACTGGGAGACCACTCCCGTGTGCCGCACAATT
TGACACAGATGCATGCATATGCATACCAAACTCAATTACTTACCAAATCA
TATTCCTCGCGTTAAATGCATACCAAACTGGAAATACACGTGTAAAATGG
ATGGAGATCCACAACCAACAGGGTGCCACACATAAAACACCCGACTAACT
AACAGCCCAACACTTTTCGTCTACACCTTCCCAACATAACATATATAAGA
CACACAACACAGCTACCAAACTGTCTTGTTGAGCCTGTTATCCGCAGGGG
AGATGTCCATATATGCTGTCTGGGAAATCGTGGACACACAACAGGTAGTT
TTCTTTGACGCTATGATTCCATTGCTAATCTGTCTTTGACTCTTTTCTCT
GACGGAGATGGACTCGTTGTGTTGTATTTGGAAAAATAAAAAAAAAAA

Coding sequence (CDS) from alignment at Scaffold_106:77875..80522-

>EsuBft3135_2a-0001 ID=EsuBft3135_2a-0001|Name=EsuBft3135_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=567bp|location=Sequence derived from alignment at Scaffold_106:77875..80522- (Ectocarpus subulatus male Bft15b)
ATGTATCCAACAGCAATGTTCGCAGACTCACGAACAGCTTTTGGAACCTT
CAAGAAGGAGGTGAGTAAAGTGCTGCAAGACTACTACCACGCAAACGGCG
GGTTGTTACCGCTGAAGCGTGACGTGCCCGGCGTGATCGCGGCGGCTTGG
CAAAAGAGCTTGACACCGGAGCGGAACAAAGCATCCTTCGGCGGGGCGGG
GCTGTGGNGGGCGGGGCTGTGGCCTGTGGACATGGATCGAGCGCTGACCC
GGCTTCAGGGCACGGCGAAGAGGAAAGAGGGACCGACCGGGCGCCCACCC
CTAGAGGACGTCCCCATCGCCATGTCCCACGAGCAGCTGGAAGAGGCCAT
CGGAGAGAGGGGCCTGAGGCAGTTGAAGGCGGGAGGACATACCATTACCG
GACTCAAGGTAGGCACGGTGATGCTCGGCGGTCTCTTGACTCAGAGGAAG
TGCGCCAAGAAACTGGCTCTTTGGGCCTTCCCGACGGAGGCAACATCAAC
TCGGAAGAATTCCTGGCAAAGGTTGACGCAAAGGAACGCGCAGACAAGGC
AGAGACCGAGGCGNNNN