Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LLA9 |
| ProteomeId | EsuBft2989_2 |
| Protein domains | G3DSA |
| Protein domains | IPR016137 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2880.D8LLA9|- |
| Length | 53 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.3e-38 |
| EggNOG OGs | 2D0MX@1|root,2SERP@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Regulator of G protein signaling domain |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0038032 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2989_2a-0001 ID=EsuBft2989_2a-0001|Name=EsuBft2989_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=531bp|location=Sequence derived from alignment at Scaffold_360:147605..148948+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCCATGTCGAACGCAGCAATATCCAGTCGATAAGGGCATCAGTACT
ACCGCGAAGGAGGCGAAACAACTACAACAACGGAGGCATCATTGCGTCAC
TCCTGCCGTACATCCCGTGGAGAGAAGACGCCAGCATCGTCGCGGTCGAT
GCGGTGGGACGCAGGTTCACTTCAAGAGGTGTCTCATTGGGTAACATCAA
CCGCAGCGTCAAGTTGGATGATGCGTTGGAGCAAATTTTATGCTTTACCC
CGCTGCTGGAGGCGTTTGAAGAGTTTTGCCAGAAGGCCCTCTGCATCGAG
TCACTCATGTTCTTGAAGGCGGTTATGGGATTCAGGGGTTCCGTTCATGC
ATCGACCGCCAGTGACGACGGCAATTTCACACTGTTGACGGATATCGTCC
AAAAGTACGTCCAGAGCGGGTCTCCGTTTGAGGTCAACATCGACAGCAAG
ACCAAGAGCAATATTCTGGTAAAGATCACAAGGGAAACCTTCATGCGACT
TCCTCAGGTGATGGGTGTACGCGAACTCTAG back to topprotein sequence of EsuBft2989_2a-0001 >EsuBft2989_2 ID=EsuBft2989_2|Name=EsuBft2989_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=176bp
MFHVERSNIQSIRASVLPRRRRNNYNNGGIIASLLPYIPWREDASIVAVD
AVGRRFTSRGVSLGNINRSVKLDDALEQILCFTPLLEAFEEFCQKALCIE
SLMFLKAVMGFRGSVHASTASDDGNFTLLTDIVQKYVQSGSPFEVNIDSK
TKSNILVKITRETFMRLPQVMGVREL back to topmRNA from alignment at Scaffold_360:147605..148948+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2989_2a-0001 ID=EsuBft2989_2a-0001|Name=EsuBft2989_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1344bp|location=Sequence derived from alignment at Scaffold_360:147605..148948+ (Ectocarpus subulatus male Bft15b)
ATGTTCCATGTCGAACGCAGCAATATCCAGTCGATAAGGGCATCAGTACT
ACCGCGAAGGAGGCGAAACAACTACAACAACGGAGGCATCATTGCGTCAC
TCCTGCCGTACATCCCGTGGAGAGAAGACGCCAGCATCGTCGCGGTCGAT
GCGGTGGGACGCAGGTTCACTTCAAGAGGTGTCTCATTGGGTAACATCAA
CCGCAGCGTCAAGTTGGATGATGCGTTGGAGCAAATTTTATGCTTTACCC
CGCTGCTGGAGGCGTTTGAAGAGTTTTGCCAGAAGGCCCTCTGCATCGAG
GTACGACCAGGTTCTTCACCTCGTGCATCGGATGGTTCGTTGGTACAACC
ATTTTCTACACACGATGGTGGATCCAAAAAAGTTCCATATTCTTTGTCAG
TTCGGAGAGTGAGCGAGTATTGTCACACAACGAAGTCCGCATGTGAGGTA
CACGCAGGTCCGGGATGAACCGAAACAAAGATATCATAATGGTGGTCGAG
TAGATCATGTTGTGTGGGGTCGAGAAGCCTCACTCCGCGCAAGGGGGATG
ATCATACCACGTTGTGTTAAAATGGTCAAGCACCCTCGACGCAGTTACAC
CGTGCTTATAACTGTATCAGGAAGTGAAAGTACCAGAAAATTTAGTCATA
CGCAGCTGTCATCCGTACGCAAGGAAGTAAGCACAAGATGCCGAACACCC
TTAGCAGGATGCAGCGCACCCTTCATGCGACTAGCCGAACACCTCACGGC
GCTTCGCGCTTGGTGATGCGAGAGCCTGGTCCGGTGAGAACCCGGTGTGC
TCTGTCCGGGCTTTGTAGGGATGCGCACGACTATGAGTACACCCCCCCCC
CTGTGTGGCCTCCGTACCATTTACGACCTCGCTAATGTAGTCATTTTGTT
CTACTCTCTGCTTGTCACATGAGGAAGACGACAAGTCATCATATTCAACG
TTCGTTTAGGTTTTGTGGATCCCCCCCCCTCTCACTTTTGCTCTCCCAAT
GCCCCTCTCCCCAACTTTTCGCGACCGATGATCTATCACCGCGACGATGC
GATGCGATGTCATCGTACAGTCACTCATGTTCTTGAAGGCGGTTATGGGA
TTCAGGGGTTCCGTTCATGCATCGACCGCCAGTGACGACGGCAATTTCAC
ACTGTTGACGGATATCGTCCAAAAGTACGTCCAGAGCGGGTCTCCGTTTG
AGGTCAACATCGACAGCAAGACCAAGAGCAATATTCTGGTAAAGATCACA
AGGGAAACCTTCATGCGACTTCCTCAGGTACGTCCATGGGTCGGTGGTGG
TTACGGGAAGTTCATAATAGGTGATGGGTGTACGCGAACTCTAG back to topCoding sequence (CDS) from alignment at Scaffold_360:147605..148948+ >EsuBft2989_2a-0001 ID=EsuBft2989_2a-0001|Name=EsuBft2989_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=531bp|location=Sequence derived from alignment at Scaffold_360:147605..148948+ (Ectocarpus subulatus male Bft15b)
ATGTTCCATGTCGAACGCAGCAATATCCAGTCGATAAGGGCATCAGTACT
ACCGCGAAGGAGGCGAAACAACTACAACAACGGAGGCATCATTGCGTCAC
TCCTGCCGTACATCCCGTGGAGAGAAGACGCCAGCATCGTCGCGGTCGAT
GCGGTGGGACGCAGGTTCACTTCAAGAGGTGTCTCATTGGGTAACATCAA
CCGCAGCGTCAAGTTGGATGATGCGTTGGAGCAAATTTTATGCTTTACCC
CGCTGCTGGAGGCGTTTGAAGAGTTTTGCCAGAAGGCCCTCTGCATCGAG
TCACTCATGTTCTTGAAGGCGGTTATGGGATTCAGGGGTTCCGTTCATGC
ATCGACCGCCAGTGACGACGGCAATTTCACACTGTTGACGGATATCGTCC
AAAAGTACGTCCAGAGCGGGTCTCCGTTTGAGGTCAACATCGACAGCAAG
ACCAAGAGCAATATTCTGGTAAAGATCACAAGGGAAACCTTCATGCGACT
TCCTCAGGTGATGGGTGTACGCGAACTCTAG back to top
|