|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft2931_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Length | 248 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2931_3a-0001 ID=EsuBft2931_3a-0001|Name=EsuBft2931_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2484bp|location=Sequence derived from alignment at Scaffold_339:167148..171912+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGCGCGCCAAGCTCATCCGAGACCACAACTTCATTGCCGCTATCAG GGACGCGTATTTTGCTTTCGAAGGCTTAACGCAGCACCCCTTTGATTTTG TGAGCTACCTCTACGGCCACTGCCCAGAGCTCATGAGCATCGACGGTTGC GCGAAAGTAATTTCGGATGACGCTACTTTGGCGCATTTCGACCAAGCTCG ACAGGAGAGACTAGTGGACATCGACCTTGGCCATCAGCTCCTGAAGATGT CTATGATATCCAAGATGGAAGATTTCATCGGCTGCTTCCAACAGCTTTGG AGGTTTGCGCTTGGACCGGATGAAGCGGACCGTTGCTCCAAGGTGTTCAT CGTCCGGCCATCGGGAAAGACGGCTGGAGTAGAAGGGCTGTTCACCCCTG ACGGAGTAGTGAATTCGCATCTGCTCCAGGTTGTGGACCTGGAGCCGTTG TGGACACCATGCGGCACCTGGCGAGCTATCGCAACACCGTCCGTGTTGGT AACGGATATCCCCTGCATGGTTGCACCTAACGCCGAGAAAAATGTCCCCG GTCTACTACAAAATGGCGGTGCTCTGCCGCGCAATGCCAAAGGCCAAGTC TCCTTGCCCGGACTGCAGCACATCGGAGCCCGTGGGTACGACTATCCGGA TCGGCACGAGGTTAGGGTGCCACCGACGGGGTGTGCATTTGTATCTGCAT CTGCATCATCAACGGCGCCGCCAGTCGACCAACTCCGATACAACGTGTAC GACGCCTTCGCCACCGCGCTGTCCGGGCCCGTTCAACCGCACATCGACTT CTCCGCCCTACTAAAACATGCTGGTGATGTTGTCGAGAGGAACCGTCAAG TCCAAGGAACTGACGACTGGTCATCTTCACCCAAGCGCATCAGCGAGCTT GCAGAGACCTCGCTCAGGTATTTGCACCAGCAAGGGTGCTATGCGTTGAA CCTCTTCGAGGTCGTCCTTGCCTACGCGTTGTGGTTTCAGGAAGCGTCTG TAGCAGACCCGCATGTCCACCTGCTGCAAGGGGGGAGGGAGTCCGGGGGA GACCCACCAGAGAGTGCGATCACCGATTTGTCGAGGGCTGAGCTCGGCAT GATCGCCGCACATCTCATGGAGATTCTGAGGGTAGCGGCAGGATCACCTC CACCCGCTCGTGGCTTGGCCGACGTGGAGGTTCCTTCGTTTGTCCTCGAG AAATACTTCCTGTACTCCCATGCCGAAACTCTGCGGCCATTGGAGGACGT CATCGACAACTACCACAACACCAAGGTCTCCTACATCACTCATCTCCTGG GCGCCAAGGACGACATACGTCGCGAACGCGCATCTCGTTTCATCCGAGCA GGAGTCGGTTTCGGAGAGGCAGAACACTCCGTGAAAGCACTGCAGATGGC GCTTTCTAGCGACTCTCTGGGCGGTGGGTTGGATGATCATGGCAGGCTGC CTGGCTACGGCATTTCCTTCCACTTCCAACGGTTCCGATCGTTTGGAGAC TATGGCCACTTCTACGATGGCAAGAGAGTTGGCCTTTGGCTAGCGCCGGA CGGACCGCACGAAGGAAATCACCAAGGGAAGTGCCAAGAGAAGTTTGGCG GCTTGGCCCGGTGCCCGCAGCTCACCGGGGTAAACTGCAACGCTCATGAA CAAAACCACTCAAAGAACAAGAAGCACCTACCCAGCGTCAACGGCATGGG GTTCGACACGTTCAACTTCAACGTCAACCTGATAAACGAGTCGGAACACA GGGGCATCAACCGCAAGACATGCGATCTGGCCGTATCAAGTGCCACCCAA CAGGCATATCAAGTGCCTGTCAGACAGAAGTGTGGGTATGCGGACGCTGC TTCTGCAGCTCCCCTCTTATGAGATCTTTCGACAAGTTGGGAGAATTGCG CATCACGCGCGTGTCGTAGACGATAGGCTTAGCGCGCATTTGAGGGAAGC AGCTTTCAAATGGATTCGTCGTAGACTAGTTCTCCTGAAAACATCAGTTA GAAAATGCAAGCGCCAATCGCTCGTACATGGCTTTCCATATGCGTTTTTT TTTTCGTTTGGTCTGGTTACAGTACAGCTTGTAGATTCCAGAGCCCTTGG GGCAAAGGGTGGGGTTATGGAAAGAGAGCGGAAGGTATCTTCTGATGGAT GCGGGTTACATTCGGCTTGTTTTCAGCCTTTGTAAAGGTGCCGACGGCTT GAGTACGATTTAGGCTTTCCTTGCGTGTTGCCCTTCTACATGCGCCCTTC TTGTAGTCTACATTGCTGGCGTCGTCTACACTCCCAAACTTGAACGGAAG AATTCGCCAACAAAGGCACAGCACACCGAAACGCTACCCACCACTTAATT TCTGGTGGCAATCTTCTATTTCCGATCCTAATCCACAGGAGGGAGGGGAA CCGGGTCAGACGAGTTTGGGATCGAGCGAAAAGCGTTTGTTGCAAGCCCC TGTTGGCCCTGGGTCTCTTCAGCAGCGGTCAAAG back to topprotein sequence of EsuBft2931_3a-0001 >EsuBft2931_3 ID=EsuBft2931_3|Name=EsuBft2931_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=623bp
MERAKLIRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGC AKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMEDFIGCFQQLW RFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVVDLEPL WTPCGTWRAIATPSVLVTDIPCMVAPNAEKNVPGLLQNGGALPRNAKGQV SLPGLQHIGARGYDYPDRHEVRVPPTGCAFVSASASSTAPPVDQLRYNVY DAFATALSGPVQPHIDFSALLKHAGDVVERNRQVQGTDDWSSSPKRISEL AETSLRYLHQQGCYALNLFEVVLAYALWFQEASVADPHVHLLQGGRESGG DPPESAITDLSRAELGMIAAHLMEILRVAAGSPPPARGLADVEVPSFVLE KYFLYSHAETLRPLEDVIDNYHNTKVSYITHLLGAKDDIRRERASRFIRA GVGFGEAEHSVKALQMALSSDSLGGGLDDHGRLPGYGISFHFQRFRSFGD YGHFYDGKRVGLWLAPDGPHEGNHQGKCQEKFGGLARCPQLTGVNCNAHE QNHSKNKKHLPSVNGMGFDTFNFNVNLINESEHRGINRKTCDLAVSSATQ QAYQVPVRQKCGYADAASAAPLL back to topmRNA from alignment at Scaffold_339:167148..171912+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2931_3a-0001 ID=EsuBft2931_3a-0001|Name=EsuBft2931_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4765bp|location=Sequence derived from alignment at Scaffold_339:167148..171912+ (Ectocarpus subulatus male Bft15b) ATGGAGCGCGCCAAGCTGTAAATATCGCAAACATCGACTGGTCCACCCCA
TCCTGCCAGAATCAGGACACACAGCCCGTTCTGGAACGTCGAGAACGCTT
ATAGGCGTATGAAAAATAGGCAAGCATCTGATGAAATACAAAAAGAGGCA
TCGCCGTCCACGACAAGCCCGGGATGCCGATTTGATTGTGTGCGTGCGAG
TTTCACGTCCTCCGAAACACTTATCAAGCCTATCATCCACCACCGGAAAC
GCGACGTGGCGTGCTGTTTGTACGCGCCGCTCTGTGCGTCAGTCACCGTC
AACGCCAACATCTCTCTCTAGTTGTCGCGGCGACAACGACCTATGTCGGA
GTTTTAGTTACAGGTCGCTCAAACTTACAGCTCTATGTTTATTGTTGGGC
GGGATAACCAAGAGGGGATGGCTTCCGTAAGTGCTGCACCCCACCCCTCC
CCGCCTAACCACCAACTGTGACGTATGATTCGCGATCGGGGGGTCCGGCT
AGAACGTCCCGATTGTGCCTCAATCAGCCGCGTCAAACATCCCCTCGCTG
AGCCCTGACAAATTTCGGCGATATCTACCACTCGCCACCTTTGAATGCTT
TTGTCCCGCCTACTGCTGTGTTGTCCACTGCCGCCTCTGTTCCCCTCAGC
ATCCGAGACCACAACTTCATTGCCGCTATCAGGGACGCGTATTTTGCTTT
CGAAGGCTTAACGCAGCACCCCTTTGATTTTGTGAGCTACCTCTACGGCC
ACTGCCCAGAGCTCATGAGCATCGACGGTTGCGCGAAAGTAATTTCGGAT
GACGCTACTTTGGCGCATTTCGACCAAGCTCGACAGGAGAGACTAGTGGA
CATCGACCTTGGCCATCAGCTCCTGAAGATGTCTATGATATCCAAGATGG
TTTTCAGGACGCGCCTCCGCTGGGTGACGGAGGCGCCCCCAACGTTCGGA
AGGCGCAACCGCATTTCGAACGTGATGCTACGGACCGCACGAGGAAAGCC
GCCGCCGGTAGGATCCCCCGAGACGGGGGATGCGGGAGAGCTCCTGCGCG
CACTTAACGGTGGCGGCATGGACGACCTCAACGAGAAAACCCTGGATGAC
CTGAAGAACATCTACAGACTCTGCTTCCCCGGTGGAAGGGGAATCAGCGC
GTGAGTTTCGGACTAGCCAGCGTGTATTTTGCTGCTATGCTTCGTTTTCG
TGGCGGCTTGTTGCGTAGAGACTTGGTACTTAGAGATTGCACTCCCGACG
AACGTATAGCCCTACGCACCTGCAAACTTGGTGCTCGGGACTGACTCTTT
TACCTTCGCAAACTTTTATCAGGTACACAAAGAAGGAAGATTTCATCGGC
TGCTTCCAACAGCTTTGGAGGTTTGCGCTTGGACCGGATGAAGCGGACCG
TTGCTCCAAGGTGTTCATCGTCCGGCCATCGGGAAAGACGGCTGGAGTAG
AAGGGCTGTTCACCCCTGACGGAGTAGTGAATTCGCATCTGCTCCAGGTT
GTGGACCTGGAGCCGTTGTGGACACCATGCGGCACCTGGCGGTGAGGAAT
CGTGCTTCTGCACGCACGGCGAAAGAAGGCGTTCCTACACCCTCGCCCCA
CATACTCTTCCCGACTACAGCCCGCTGACTCCCGTCTCTCTTCTTCTTCC
GCTTTTTGTATTTGACGTCGAACTTTTGTCGACGTGATGTTGCTATTCCT
GCGTCGTTGGTTGTATCCATTCCATATGTAAGCGAAGGACATAACTCGAA
CTCCATGTTGAAGATCGTGCGCATCCATGTCGGGCCAGCATGATATTGAT
CAAACAATGCCAGGGTGGGTATGCAAGGGTAGGAAGAGCTATCGTCTGTT
TTACTTGACGTCTGCGGGCACCTTGAGTGGAATGTGCATGCGTGTGTGTG
GGGGGTGCTTTATGGTGCCCATCCTCCCTAACCCGTGTAAGCTTCGACAG
CTTTGGTTAAGATAAGTTGGAATGTGACAGTTGGCAGCATTCTCCACCCG
ACCACTGCCGCTAGCTGTCCTGTCCATTGTTGTCCTGGCTAGTTAGCAGT
TTTTTTTTACTTTGCATGTCTGTGATGCTTTATGGTCATGGGTCAGCTCG
GATGGATGGTGAAGAACGTCTAGGTTTTTGTAGGAGCCCCTTCCATTCAC
GTTCTTGCTGCATGCTGTTGATTTTCGTCCCTGCCAGGCAACACCGTCCG
TGTTGGTAACGGATATCCCCTGCATGGTTGCACCTAACGCCGAGAAAAAT
GTCCCCGGTCTACTACAAAATGGCGGTGCTCTGCCGCGCAATGCCAAAGG
CCAAGTCTCCTTGCCCGGACTGCAGCACATCGGAGCCCGTGGGTACGACT
ATCCGGATCGGCACGAGGTTAGGGTGCCACCGACGGGGTGTGCATTTGTA
TCTGCATCTGCATCATCAACGGCGCCGCCAGTCGACCAACTCCGATACAA
CGTGTACGACGCCTTCGCCACCGCGCTGTCCGGGCCCGTTCAACCGCACA
TCGACTTCTCCGCCCTACTAAAACATGCTGGTGATGTTGTCGAGAGGAAC
CGTCAAGTCCAAGGAACTGACGACTGGTCATCTTCACCCAAGCGCATCAG
CGAGCTTGCAGAGACCTCGCTCAGGTATTTGCACCAGCAAGGGTGCTATG
CGTTGAACCTCTTCGAGGTCGTCCTTGCCTACGCGTTGTGGTTTCAGGAA
GCGTCTGTAGCAGACCCGCATGTCCACCTGCTGCAAGGGGGGAGGGAGTC
CGGGGGAGACCCACCAGAGAGTGCGATCACCGATTTGTCGAGGGCTGAGC
TCGGCATGATCGCCGCACATCTCATGGAGATTCTGAGGGTAGCGGCAGGA
TCACCTCCACCCGCTCGTGGCTTGGCCGACGTGGAGGTTCCTTCGTTTGT
CCTCGAGAAATACTTCCTGTACTCCCATGCCGAAACTCTGCGGCCATTGG
AGGACGTCATCGACAACTACCACAACGTGAGGCTTTATTTCGTTGGGCAT
TTGGGACTTCGTGATGCATGACGAGTTCTGTCACGTGTCCGTCAATGGGA
GAGTCTTCGCGGTATGCTCAAAGTGTTCATCGTTCGACGTCATCGACACT
ACTCCATCTCCCCCAACGCCGCTTCCTCTCCCCCATCTCTCTCTGACCCT
CCCATCCAGACCAAGGTCTCCTACATCACTCATCTCCTGGGCGCCAAGGA
CGACATACGTCGCGAACGCGCATGTGAGAATTTACCCTAGCACGTTTACT
ATGTCGCGTTTTTAATACAAGTATCCGTTGCATACCCCAAGTAGGTGTGT
TATTAGTTGTCATGTGTTCGCTTGGTCGCAGCAGCAATATCCCGTTCTTG
GCAACAAGTTCTAGTAGCCTGTCCTCCTTTTGGCGTACCCGTACCATTAC
TCGTAATATTGGAACATTCGATACAAGTCTTCGCAAGGGAACGACGGGGT
ATTTTCCCGTACCAACACGTTGCCGTACCCCTAAACTCCCGGCCATGTTT
GCGCTCGCTACCCGCAATTGGTCATTTGCGACACCGCCCGTTATGTTCGT
GCGACACGTTTAGTCCCTGAGTAGCCGCTCGTTCCCCCCCGTGTTTTTTT
TGCGATGAAAGCAGCTCGTTTCATCCGAGCAGGAGTCGGTTTCGGAGAGG
CAGAACACTCCGTGAAAGCACTGCAGATGGCGCTTTCTAGCGACTCTCTG
GGCGGTGGGTTGGATGATCATGGCAGGCTGCCTGGCTACGGCATTTCCTT
CCACTTCCAACGGTTCCGATCGTTTGGAGACTATGGCCACTTCTACGATG
GCAAGAGAGTTGGCCTTTGGCTAGCGCCGGACGGACCGCACGAAGGAAAT
CACCAAGGGAAGTGCCAAGAGAAGTTTGGCGGCTTGGCCCGGTGCCCGCA
GCTCACCGGGGTAAACTGCAACGCTCATGAACAAAACCACTCAAAGAACA
AGAAGCACCTACCCAGCGTCAACGGCATGGGGTTCGACACGTTCAACTTC
AACGTCAACCTGATAAACGAGTCGGAACACAGGGGCATCAACCGCAAGAC
ATGCGATCTGGCCGTATCAAGTGCCACCCAACAGGCATATCAAGTGCCTG
TCAGACAGAAGTGTGGGTATGCGGACGCTGCTTCTGCAGCTCCCCTCTTA
TGAGATCTTTCGACAAGTTGGGAGAATTGCGCATCACGCGCGTGTCGTAG
ACGATAGGCTTAGCGCGCATTTGAGGGAAGCAGCTTTCAAATGGATTCGT
CGTAGACTAGTTCTCCTGAAAACATCAGTTAGAAAATGCAAGCGCCAATC
GCTCGTACATGGCTTTCCATATGCGTTTTTTTTTTCGTTTGGTCTGGTTA
CAGTACAGCTTGTAGATTCCAGAGCCCTTGGGGCAAAGGGTGGGGTTATG
GAAAGAGAGCGGAAGGTATCTTCTGATGGATGCGGGTTACATTCGGCTTG
TTTTCAGCCTTTGTAAAGGTGCCGACGGCTTGAGTACGATTTAGGCTTTC
CTTGCGTGTTGCCCTTCTACATGCGCCCTTCTTGTAGTCTACATTGCTGG
CGTCGTCTACACTCCCAAACTTGAACGGAAGAATTCGCCAACAAAGGCAC
AGCACACCGAAACGCTACCCACCACTTAATTTCTGGTGGCAATCTTCTAT
TTCCGATCCTAATCCACAGGAGGGAGGGGAACCGGGTCAGACGAGTTTGG
GATCGAGCGAAAAGCGTTTGTTGCAAGCCCCTGTTGGCCCTGGGTCTCTT
CAGCAGCGGTCAAAG back to topCoding sequence (CDS) from alignment at Scaffold_339:167148..171912+ >EsuBft2931_3a-0001 ID=EsuBft2931_3a-0001|Name=EsuBft2931_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1872bp|location=Sequence derived from alignment at Scaffold_339:167148..171912+ (Ectocarpus subulatus male Bft15b) ATGGAGCGCGCCAAGCTCATCCGAGACCACAACTTCATTGCCGCTATCAG GGACGCGTATTTTGCTTTCGAAGGCTTAACGCAGCACCCCTTTGATTTTG TGAGCTACCTCTACGGCCACTGCCCAGAGCTCATGAGCATCGACGGTTGC GCGAAAGTAATTTCGGATGACGCTACTTTGGCGCATTTCGACCAAGCTCG ACAGGAGAGACTAGTGGACATCGACCTTGGCCATCAGCTCCTGAAGATGT CTATGATATCCAAGATGGAAGATTTCATCGGCTGCTTCCAACAGCTTTGG AGGTTTGCGCTTGGACCGGATGAAGCGGACCGTTGCTCCAAGGTGTTCAT CGTCCGGCCATCGGGAAAGACGGCTGGAGTAGAAGGGCTGTTCACCCCTG ACGGAGTAGTGAATTCGCATCTGCTCCAGGTTGTGGACCTGGAGCCGTTG TGGACACCATGCGGCACCTGGCGAGCTATCGCAACACCGTCCGTGTTGGT AACGGATATCCCCTGCATGGTTGCACCTAACGCCGAGAAAAATGTCCCCG GTCTACTACAAAATGGCGGTGCTCTGCCGCGCAATGCCAAAGGCCAAGTC TCCTTGCCCGGACTGCAGCACATCGGAGCCCGTGGGTACGACTATCCGGA TCGGCACGAGGTTAGGGTGCCACCGACGGGGTGTGCATTTGTATCTGCAT CTGCATCATCAACGGCGCCGCCAGTCGACCAACTCCGATACAACGTGTAC GACGCCTTCGCCACCGCGCTGTCCGGGCCCGTTCAACCGCACATCGACTT CTCCGCCCTACTAAAACATGCTGGTGATGTTGTCGAGAGGAACCGTCAAG TCCAAGGAACTGACGACTGGTCATCTTCACCCAAGCGCATCAGCGAGCTT GCAGAGACCTCGCTCAGGTATTTGCACCAGCAAGGGTGCTATGCGTTGAA CCTCTTCGAGGTCGTCCTTGCCTACGCGTTGTGGTTTCAGGAAGCGTCTG TAGCAGACCCGCATGTCCACCTGCTGCAAGGGGGGAGGGAGTCCGGGGGA GACCCACCAGAGAGTGCGATCACCGATTTGTCGAGGGCTGAGCTCGGCAT GATCGCCGCACATCTCATGGAGATTCTGAGGGTAGCGGCAGGATCACCTC CACCCGCTCGTGGCTTGGCCGACGTGGAGGTTCCTTCGTTTGTCCTCGAG AAATACTTCCTGTACTCCCATGCCGAAACTCTGCGGCCATTGGAGGACGT CATCGACAACTACCACAACACCAAGGTCTCCTACATCACTCATCTCCTGG GCGCCAAGGACGACATACGTCGCGAACGCGCATCTCGTTTCATCCGAGCA GGAGTCGGTTTCGGAGAGGCAGAACACTCCGTGAAAGCACTGCAGATGGC GCTTTCTAGCGACTCTCTGGGCGGTGGGTTGGATGATCATGGCAGGCTGC CTGGCTACGGCATTTCCTTCCACTTCCAACGGTTCCGATCGTTTGGAGAC TATGGCCACTTCTACGATGGCAAGAGAGTTGGCCTTTGGCTAGCGCCGGA CGGACCGCACGAAGGAAATCACCAAGGGAAGTGCCAAGAGAAGTTTGGCG GCTTGGCCCGGTGCCCGCAGCTCACCGGGGTAAACTGCAACGCTCATGAA CAAAACCACTCAAAGAACAAGAAGCACCTACCCAGCGTCAACGGCATGGG GTTCGACACGTTCAACTTCAACGTCAACCTGATAAACGAGTCGGAACACA GGGGCATCAACCGCAAGACATGCGATCTGGCCGTATCAAGTGCCACCCAA CAGGCATATCAAGTGCCTGTCAGACAGAAGTGTGGGTATGCGGACGCTGC TTCTGCAGCTCCCCTCTTATGA back to top
|