|
|
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7FWA5 |
| ProteomeId | EsuBft2787_2 |
| Protein domains | IPR002123 |
| Protein domains | SSF69593 |
| Protein domains | G3DSA |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | glycerol-3-phosphate chloroplastic os:cucumis sativus pe:2 sv:1 [Automatic annotation] |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1607 |
| Hectar predicted targeting category | other localisation |
| Evalue | 3.18e-137 |
| EggNOG OGs | 28J58@1|root,2QRHE@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | GPAT |
| KEGG rclass | RC00004,RC00039,RC00041 |
| KEGG ko | ko:K00630 |
| KEGG Reaction | R00851,R09380 |
| KEGG Pathway | ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 |
| KEGG Module | M00089 |
| GOs | GO:0003674,GO:0003824,GO:0004366,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 |
| EC | 2.3.1.15 |
| Description | sn-1-glycerol-3-phosphate C16:0-DCA-CoA acyl transferase activity |
| COG category | I |
| BiGG Reaction | iRC1080.CRv4_Au5_s2_g9657_t1 |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0016746 |
| GO | 0006629 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2787_2a-0001 ID=EsuBft2787_2a-0001|Name=EsuBft2787_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1607bp|location=Sequence derived from alignment at Scaffold_360:299626..304430+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGATTACATTCTGCTACGAATTGGCGCGACTGCTTTTTCGCGGCGCC
ACCCCACGGCGTTTCGCGCTTGGGGTGCATGATCATGACGATGGTGCCCG
AGAACATGAAGAAGCCGTACGAGTTCGAGCTGTTCCACGAATCAACGAGG
GACCCGGTGGACCTCTACACGTGGGGGAACGACTTCTTCCGTCCCCTCAT
CGAGCTGGACAACTCGAGGCTCGAGGGCAAGGAGAACTTGGAGAAGATCG
CCGAGTACCTGGCCAAGGGAGAGAACGTCTTCCTCATGTCTAACCACCAG
ACGGAAGCCGATCCCCAGGTGATCAGCCTCCTGATGGAGCGTGAGGGGTA
CGGGGACGAGGCGTCGCGACTGATCAACGTGGCGGGGCACCGCGTGACCA
CGGACCCGTTGGCGATCCCCTTCAGCATGGGCAGAAACCTTTTCTGCATT
TTCTCCAAGAAGTACATGGAGACTCCCCCGGAACTCAAGGGCGAGAAGCA
GAAGCACAACGTCCGTACCTTGAAAAAGATGGCGGAGATGATGAGCGAAG
GGGGGCAATTCATCTGGGTGGCACCTAGCGGGGGCCGAGACAGGCCGGAT
CCGGAGACGGGCAAGTTCGTCGTGTCCCCTTACGACCCCAAGTCGGTGGA
GGTGTTCCGGCTTATGGCCGCAAAGGCCATGGGGAGGAACAAGACGGGGC
CGGTGACGCACTTCTTTCCCTTCGCGATGTGGACCAACAAGCTTGTGCCC
CCTCCGGACCAGGTCAACAAGGAGCTCGGCGAGCGGCGGCAGGCCGACAG
GGGCCCCGCAAGCGTCGCCTTCGGGGAAGAGGTGCTGCCGCCGCCCGGGG
AAACCTTGAAGCAGGCGGAGTTCGTCGCGATCATGGAGGAGAGAGTTCAG
GCGGAGTACGCCAAGCTCGACGACTTCCATGAATCCAAGCAGAAATGATC
GAGGGTTGGATTCGATTTGCACGGGTTGGGCTGGGCGTCGTCTCTCATCA
CGAGGCCGGTTGACCCCCCTCAGGAACAAGTAAAAACTATGTTCCCGCTT
GGTATGGTTGATATAGGCGGCGGTTGTGGCCGATTGTAGGTGTGTTGGCT
GCTGGTCAGCGTGCTGGTTTCGTTTTCTTTTTTGTCGTATCGCAAAGCGG
AGACGGGAGCTACTTCCACCCCATCGGGGGGAGATGTGTGGTACGTACGT
GAGGTGTCCGTTGTGTATAGAGAGGCCCGATGCCGTCTGACCGTGGGCAG
GGGAAGGCAGAGAAGCGGCGCATCTATGTGCGGGCTTATTTGCGCGCGTT
GCTGTTTGCTCCAGCTGTTTTGAGAGGCTTGTGTCCGGAGTGGCAACCTT
CGTCATACGCGCGCGTTGGAACGGTGACATGCCTGCGTCGTTTTTTTTTG
CGAGGCCCAGTTTCGGTTCGTTTAGAGCGTATATAGATGTTGACGCAGGC
GTGGTGTTGTCCTCCAGCTGTACGTGCACCGGCACGTGCCCTGGCTGAAA
ATATATAGGTAAACCGGCACTAGAGAGAGCCACCGGCAGAACTGACGAAA
CTGGGCGTTTCCGACCCTCCCTGTGCTGAGCGATTTCGTGGGCACTATGC
CGCTGCT back to topprotein sequence of EsuBft2787_2a-0001 >EsuBft2787_2 ID=EsuBft2787_2|Name=EsuBft2787_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=315bp
MRLHSATNWRDCFFAAPPHGVSRLGCMIMTMVPENMKKPYEFELFHESTR
DPVDLYTWGNDFFRPLIELDNSRLEGKENLEKIAEYLAKGENVFLMSNHQ
TEADPQVISLLMEREGYGDEASRLINVAGHRVTTDPLAIPFSMGRNLFCI
FSKKYMETPPELKGEKQKHNVRTLKKMAEMMSEGGQFIWVAPSGGRDRPD
PETGKFVVSPYDPKSVEVFRLMAAKAMGRNKTGPVTHFFPFAMWTNKLVP
PPDQVNKELGERRQADRGPASVAFGEEVLPPPGETLKQAEFVAIMEERVQ
AEYAKLDDFHESKQK back to topmRNA from alignment at Scaffold_360:299626..304430+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2787_2a-0001 ID=EsuBft2787_2a-0001|Name=EsuBft2787_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4805bp|location=Sequence derived from alignment at Scaffold_360:299626..304430+ (Ectocarpus subulatus male Bft15b)
ATGAGATTACATTCTGCTACGAATTGGCGCGACTGCTTTTTCGCGGTGCG
GTCAACGTGTGCACGAACGAAAGGCTTCCGAGAATCGCGTCGAAAGTTGG
AGAAATGTGAGCATCTCACTAAAAGCCAAGTAGCGATTTTTCTCCACTCA
ACCACGCCATCAAACACTACGAAGCAGTCATAAGCATAGAATGATGTGCG
CAAGGTGCCTTGAGTCCTCCCCTACAAAAGCGGTTGGTGGCTACATAGGC
GCCACCCCACGGCGTTTCGCGCTTGGTGCTCTTCATGGGTGGTCCCTCGC
GGAAACCCAGCTTGATTCATCGTGGCCTTTGTCGGGAAGATCGTGTCTGT
AAGTTGAAAGGCTTTGAAGGGGTGCATGATCATGACGGTGAGTACCACCC
ACCCACCCACCCACCCACCCCCCGGCCATTTTTTCATTCTCGGCCTTGCG
CATCTCCGTAGATGGTGCCCGAGAACATGAAGAAGCCGTACGAGTTCGAG
CTGTTCCACGAATCAACGAGGGACCCGGTGGACCTCTACACGTGGGGGAA
CGACTTCTTCCGTCCCCTCATCGAGCTGGACAACTCGAGGCTCGAGGGCA
AGGAGAACTTGGAGAAGATCGCCGAGTACCTGGCCAAGGGAGAGAACGTC
TTCCTCATGTCTAACCACCAGGTGGGTGGGTGTGTTTAGTGCTGGGTTGT
AGGTGTGGTTTATGTTGTTGTTGTTGTTGTTGTTTGCTCTAGGAGGCCAG
CTACTTGATGTGTTGTTGCTGTTGTTTGCTCTGTGGGATATGTGCTGTAC
TCGATTCACTGCTTCTGAGAAGCTGGTCGTTTATGTACCCTCCGTTTTCT
GTTGGCTTCGTACCTGTTTTTTTGTTGCCTTTGTCGTTGTTTTGACGGAC
ACACGCCAAGACTTTAAGGATTTTGTCGTCTCGTATCGTTCATCCGTTGC
TGTGTCTATCACCTTCGGGCTTTTAGTTCTCCTCGTGGTGTTGTTTTTTG
TTTTTGCTGCTACCGCTGCTGCTACTGCTGTCGTTCAAATGTTGATGGTC
GGGACGGAAGCAACAGCAAAGAGCTAGCGTCTAACGAAATTTTTCCATCC
AGAGATTTTTTTTTTCCTCGTTGCATCCATGCTCCTCTATTTGGCTGGGT
CTTGTTCATATCTGTCATTCCCCGATTTCCCTCCCTATTCTTTTTTTCGC
CCGCGGTTTGTTGTTAACGGTGCAGACGGAAGCCGATCCCCAGGTGATCA
GCCTCCTGATGGAGCGTGAGGGGTACGGGGACGAGGCGTCGCGACTGATC
AACGTGGCGGGGCACCGCGTGACCACGGACCCGTTGGCGATCCCCTTCAG
CATGGGCAGAAACCTTTTCTGGTGAGAGTAGGCGAGTTGGTGGCGAGGAA
GAGAGAGAGAGAGAGACAAACAGACAGACAGGGACAGGGACAGAGACAGA
GACAGAAGATATACTTCCCTGCATGTAATGTTATGCGTAACACGAAGAGA
GATGGACATACAGACATACGGAGCGAGAGGGGCTATGTAGCTAAATGTGT
GGTGGGTACGGGTCACAGCCAACCCCCAAAGGGGTGGGCACCGGTCAACG
TCCGCGAGAAAACAATGAGGCGAGGAACGAAATGGGTGGACTGATCGCCT
GCCCCGCCCCGACTCTTAAGTGGAAGCACGGGGAGGGGTGGGTGTGTGTG
TGCGGAAAGCGGGAATCGTCCTCGACGAACGTTGGGGAGTTGGAACCTTA
ATAAGGGCACCTCCATACGCGGGTCGTTCCTGATGTTAATGACAAGATGC
GATAATAGAGCAGAGCACAGCAAATCGTAAATCACATTTGCGGATTCGAT
CCGCTTATTGGCTGGGCGACTCGAACCATCTCTCAATCCCTCCGTTCCTC
GCTCTGCCTGCCCCGCCCCCCCGCTCACCTGCTCTGGTTGGTTGTGCCCA
CTGTTGAAACGAAACCCTCTGGTTTTATTTGATTCGTTTGTCGTGATGGG
CACAACGGCAGCATTTTCTCCAAGAAGTACATGGAGACTCCCCCGGAACT
CAAGGGCGAGAAGCAGAAGCACAACGTCCGTACCTTGAAAAAGATGGCGG
AGATGATGGTGAGGCTACAATATGCACACCTGTCGTCGAACACAAGTCGC
ATATATTGATGCGCTCCAGGCGCAGGAATAATACAGACTTGGAAGTACAG
AGTGCGAAGACGTTTCTCCTATGCACTTGGTCTGCAACATGCTTCCCACC
AATTCCCATGTATCCCAAGGGGTTGGCTGGTGACCTGTTTCTTGTCGCGT
CTTGGCTGCTGCTGCACTCGCTGCTTGGTGCGGTGTCCTGCTGCGCGCTA
TTTGCAGCCAGAAATGGTTGCCCTTTAGGGAGAGAACAAGTTCCTCCTCA
GTCTTTACACGTTTTTTTGTTCAAGATTTGTTTTTGTTGTTGGAATGCGA
TCTATGCCATGGCTTTCAACCGGCCGAAGGTAAGGGGTCAAGGTAAAAAG
GGGTCAAGGTAAAAAGCTCTATTTTTGTTGTTCTCTGCCAACCGGCAGGA
GAAGTTGAAATTCCGGTCTATCTGGGGGCTATTCGTGACTATTGTGTATG
TTACTGCGTGGAAATAGCTCCAAACTACAATGTGGATATGATTCAGTTTG
TCAGTAATAGGGTCTGTGAGTGCTCCGACTCTTCAAACCCAGCCAAGTGG
TACATGCCACTACATACATAGCGGTGACAGAGAAGACGAACCGCAAATAC
GCAACACCCAACGAGTACCGCCCCTCCCTCCATCTGAACCCCCACCCCCA
ATGAGTCACCTTTGGTACATTGGCCGTCGTTGGCGGTCCTGTGGAAACAC
TGCTCCGTCTTCTCGAGGACGCGTGGTCAATGTTCTAAACCGCTAAGGCA
TGAAAAACATAAAATCCCCCCTCCCTCCCCCCCCAAAATACCCAATAACC
AACGAGCTCCCCCCCCTCCCTCCCCCCGGAACGTTGCAGAGCGAAGGGGG
GCAATTCATCTGGGTGGCACCTAGCGGGGGCCGAGACAGGCCGGATCCGG
AGACGGGCAAGTTCGTCGTGTCCCCTTACGACCCCAAGTCGGTGGAGGTG
TTCCGGCTTATGGCCGCAAAGGCCATGGGGAGGAACAAGACGGGGCCGGT
GACGCACTTCTTTCCCTTCGCGATGTGGACCAACAAGCTTGTGCCCCCTC
CGGACCAGGTCGGTTTTTTTGTGTTTGTTGTGTGTAATGATTATGATTTG
CCTATACCAACCTGCCTTTTTTTTTTCCGTCTTGCTGCTAGGTAGGGTTT
GCCTACAACGCCCACATCTGTTGTTTCTTTTTTCATGTTTTTCCTCGTCA
CGCTGCCGTGTGGCCCCGCCTGGTACGTTTCAAACACACGTAAAGACGTT
CGTGCGTATATGGAACCGAAGGGACGAAAACAGACAGGCAGACACAATGC
CACTCAGCCGCCGACCTTTTGCGGACAACGCAGTTGTAGGCCGCCAGAGA
CTCCCTGCTCAGGGCTGACTCCCTCCGCTACGAACACGTTTCGAAACGGA
CCCGGGCGCAATCACGGCTGTTGGTAAATAGAGGGGGGGTGCAGCGGACT
ATCTCGTGTGGATAGGTACCCTTTCGGCCGAAGATGACGTACACGTGTTC
TTCTTGAAGTAGTTTTCCCGGAGGATTCATGTTGAATTTGTTTTTCCAGC
GCTCGTGTTGGCTCCACGAGGTGATGAGGAAACGAGGGGATTTCGAACAA
GCGCGTCGTCGGTCGCTCGTGCGTTGTTTCGCAATGCAAACTGTGAGCGA
TGGCTACGATTTTTGTCGTACATAGCCGCAGATGAGCCCCCCATCACGAA
CGAAGCATCACCGCTACATTTCAACACCTCACCATACTTTTTACGTTGAG
CGGCAACCATGACGAGCGGAACTATTCAGCGCACATGTCCCCCCCCCACG
CATGCGAAAGGTCAACAAGGAGCTCGGCGAGCGGCGGCAGGCCGACAGGG
GCCCCGCAAGCGTCGCCTTCGGGGAAGAGGTGCTGCCGCCGCCCGGGGAA
ACCTTGAAGCAGGCGGAGTTCGTCGCGATCATGGAGGAGAGAGTTCAGGC
GGAGTACGCCAAGCTCGACGACTTCCATGAATCCAAGCAGAAATGATCGA
GGGTTGGATTCGATTTGCACGGGTTGGGCTGGGCGTCGTCTCTCATCACG
AGGCCGGTTGACCCCCCTCAGGAACAAGTAAAAACTATGTTCCCGCTTGG
TATGGTTGATATAGGCGGCGGTTGTGGCCGATTGTAGGTGTGTTGGCTGC
TGGTCAGCGTGCTGGTTTCGTTTTCTTTTTTGTCGTATCGCAAAGCGGAG
ACGGGAGCTACTTCCACCCCATCGGGGGGAGATGTGTGGTACGTACGTGA
GGTGTCCGTTGTGTATAGAGAGGCCCGATGCCGTCTGACCGTGGGCAGGG
GAAGGCAGAGAAGCGGCGCATCTATGTGCGGGCTTATTTGCGCGCGTTGC
TGTTTGCTCCAGCTGTTTTGAGAGGCTTGTGTCCGGAGTGGCAACCTTCG
TCATACGCGCGCGTTGGAACGGTGACATGCCTGCGTCGTTTTTTTTTGCG
AGGCCCAGTTTCGGTTCGTTTAGAGCGTATATAGATGTTGACGCAGGCGT
GGTGTTGTCCTCCAGCTGTACGTGCACCGGCACGTGCCCTGGCTGAAAAT
ATATAGGTAAACCGGCACTAGAGAGAGCCACCGGCAGAACTGACGAAACT
GGGCGTTTCCGACCCTCCCTGTGCTGAGCGATTTCGTGGGCACTATGCCG
CTGCT back to topCoding sequence (CDS) from alignment at Scaffold_360:299626..304430+ >EsuBft2787_2a-0001 ID=EsuBft2787_2a-0001|Name=EsuBft2787_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=948bp|location=Sequence derived from alignment at Scaffold_360:299626..304430+ (Ectocarpus subulatus male Bft15b)
ATGAGATTACATTCTGCTACGAATTGGCGCGACTGCTTTTTCGCGGCGCC
ACCCCACGGCGTTTCGCGCTTGGGGTGCATGATCATGACGATGGTGCCCG
AGAACATGAAGAAGCCGTACGAGTTCGAGCTGTTCCACGAATCAACGAGG
GACCCGGTGGACCTCTACACGTGGGGGAACGACTTCTTCCGTCCCCTCAT
CGAGCTGGACAACTCGAGGCTCGAGGGCAAGGAGAACTTGGAGAAGATCG
CCGAGTACCTGGCCAAGGGAGAGAACGTCTTCCTCATGTCTAACCACCAG
ACGGAAGCCGATCCCCAGGTGATCAGCCTCCTGATGGAGCGTGAGGGGTA
CGGGGACGAGGCGTCGCGACTGATCAACGTGGCGGGGCACCGCGTGACCA
CGGACCCGTTGGCGATCCCCTTCAGCATGGGCAGAAACCTTTTCTGCATT
TTCTCCAAGAAGTACATGGAGACTCCCCCGGAACTCAAGGGCGAGAAGCA
GAAGCACAACGTCCGTACCTTGAAAAAGATGGCGGAGATGATGAGCGAAG
GGGGGCAATTCATCTGGGTGGCACCTAGCGGGGGCCGAGACAGGCCGGAT
CCGGAGACGGGCAAGTTCGTCGTGTCCCCTTACGACCCCAAGTCGGTGGA
GGTGTTCCGGCTTATGGCCGCAAAGGCCATGGGGAGGAACAAGACGGGGC
CGGTGACGCACTTCTTTCCCTTCGCGATGTGGACCAACAAGCTTGTGCCC
CCTCCGGACCAGGTCAACAAGGAGCTCGGCGAGCGGCGGCAGGCCGACAG
GGGCCCCGCAAGCGTCGCCTTCGGGGAAGAGGTGCTGCCGCCGCCCGGGG
AAACCTTGAAGCAGGCGGAGTTCGTCGCGATCATGGAGGAGAGAGTTCAG
GCGGAGTACGCCAAGCTCGACGACTTCCATGAATCCAAGCAGAAATGA back to top
|