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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LDH2 |
| ProteomeId | EsuBft2709_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 225 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.1e-58 |
| EggNOG OGs | KOG4157@1|root,KOG4157@2759|Eukaryota |
| Ec32 ortholog description | oxt |
| Ec32 ortholog | Ec-15_000280.2 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| KEGG rclass | RC00467 |
| KEGG ko | ko:K15920 |
| KEGG Reaction | R01433 |
| KEGG Pathway | ko00520,ko01100,map00520,map01100 |
| EC | 3.2.1.37 |
| Description | protein xylosyltransferase activity |
| COG category | U |
| CAZy | GH3 |
| BRITE | ko00000,ko00001,ko01000 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2709_2a-0001 ID=EsuBft2709_2a-0001|Name=EsuBft2709_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2250bp|location=Sequence derived from alignment at Scaffold_523:4153..9753+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCGTGGAACAGAACGGAGTGTCATCCTCGCGGTCTGTTCATTGTTC AAAACGTCTCTTGCCACCCCTCCGTTCCGTGGTACGCGACGTCATTGTCA AGAATCGTTGCTGCAACCCGCGTGTGTCGTCGATGTTCAACAGGGAAGCC AGGATCGACATCACCTGCGAGCCCAAAAAGGACAACGTCATCGACTGGGA TTGCATTTTTGTGAGTGTGAAGTTGGTTGCCGTCCCCCTCATCAACGTGC TGAGGACAAATACTCGTTCATCGTCACCACCTCGATTTGACTTACTGAAG GGCGAAGATTCGGAGGAGGAGGTTCTCAAGTACAGGAGCAAGGACAAGAA AGAGAGGGCGACCCACACTTCGTGTACGGACAAAGACCGCCCGTGCTCCA GGTTTATCGTTCCCAAGAATGTGCAGAGAGCAGAAACTAAAGTGGCTTAC GGGCCCGAGGGCTTCCCCTTCCTCAAGGGCGAGAGGTACATCTACAAGTA CAGCTTCCGCGCGGTCGAGGGAATGAAGCTCGGCAAACGTTTTACGCATA TTGGCCAGATCAAAGGCGCCTACAACGGAGGGCAGACGGTGGACGGAGAC CCGATTGTATCCATCAGTGCCAACCTCGACGGTCTCCATGTTCGCTTCTC CAACATTGACAAGACCATCCCCGACTACTACACCCATGACAGCTGGTACC GGAATTGGGAGGACGCCACGGGAGAATGGGTGCACGTGACGATCGACACG GTCTTTGGGGAGTTCATGGAGGTGGAATTCGCAGGGGGCGTGAGCGGGAA GTTCGTCTGGCCTAAGGATAAGACTCCTGTCGCCTGGAACAACAAGGGGA AAATGGCCAGAATGAAGCTAGGGCTGTACCATAAAGAGGAACAAGTTGGC GACGGCGAAGTCGAGATCAGGGATGTCTCCATCGAAGGGCCGAACGGCAT TATCCGCACGAGTCCAGAGGTATAAAACCTAGCGCTTGCTCCGAGAGCAC CAGGAGAATAAAACCGATGGGTCGCCTGCTTCATGTCTTCATACGTTGCG GGCGGTCGCCTAGGTCACTCAGCGACTGACAAAAATGTTGAACAGTCGAG GGTTCGAACTGACCACCTGTACAATCTTTCGGGCCTCTCGTTGTATGCGT CCTGCACTGCTCTCGTTCTTTCGTGTTCAACGCCACGCCAGGAGTCGCCA TCGCCCAGCTCAAGTGAGAAACACCTTTCCACGCGTTGCACTAGTCGCCA AGCGCTCATCTGTGTATTGTATGTATCACCTGGGCATTCCGTTTTACAGC GCTTTGCCAACAGCGCCAACCCACCTAAGCTAGAACGGAGGGTGGACACC GTTTTTCACCAACCGCTGGGGAATGTAAAACACACCACCCCAAATATAGC CCCCATAGTATGCGGTACCAAAGACGCGTGACGCATGGACGAGTGGAGTG AGGATAGCTGTATACTGAAACCTCAAGGGCTGAGTGAGGTTTAAGATTGC CAGACACATGGACGGGTTGAGTGGGGATAGCTACATAATGAAATCCCATG GGTTGAGTGAAGTTGGAGTGCCGGACACATAGAGCCGTTGAGTGAGGATA GACACATACTGAACCTCACAGGTGGTTTGTGTTGGAGATTGCCGGACACA TGGACGTGCTGAGTGGAGATAGCTGCATACTGAAACCTCACAGATGGAAT GATTCTTGTGTTTGCCAGACACAAGACGCACTGAGTGGGGATAGCTACAT AATGAAATCCCATGGGTTGAGTGAAGTTGGAGTGCCGGACACATAGACGC ATTGAGTGAGGAAAGACACATACTGAAACCTCACAGGTGATTTGCATTGG AGAGTACCGGACACGTAGACGTGTTGAGTGAGGATAGCTTCATACTGAAA GCTCACAGATGCATTGTTTGCCAGACACATAGACGCGCTGCGTGGGGATA GGTACATACTGAAACCTCAAGAGTTGAGTGATGTTGGATAGTGCCAGACA CATAGACGCTTTAAGTAAGGATAGCTGCATATTGGGACCTAACGGGTTGA GTGACGTTTGCGACTGCCGGACACATGGACGCACTGAGTAAAGAAAGCTG CATACTGAAACTTCAAAGGTTGATTTGTATTGGAGATTGCACGACACATA GACGCGTTGAGTGAGGATAGCTGTGTACTGAAAATCCACAGTAGCTATAG TGAGGGGACAATTCGAGAATGCAGTACACATAGACCCGACCCCCAATCCG back to topprotein sequence of EsuBft2709_2a-0001 >EsuBft2709_2 ID=EsuBft2709_2|Name=EsuBft2709_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=324bp
MFVEQNGVSSSRSVHCSKRLLPPLRSVVRDVIVKNRCCNPRVSSMFNREA RIDITCEPKKDNVIDWDCIFVSVKLVAVPLINVLRTNTRSSSPPRFDLLK GEDSEEEVLKYRSKDKKERATHTSCTDKDRPCSRFIVPKNVQRAETKVAY GPEGFPFLKGERYIYKYSFRAVEGMKLGKRFTHIGQIKGAYNGGQTVDGD PIVSISANLDGLHVRFSNIDKTIPDYYTHDSWYRNWEDATGEWVHVTIDT VFGEFMEVEFAGGVSGKFVWPKDKTPVAWNNKGKMARMKLGLYHKEEQVG DGEVEIRDVSIEGPNGIIRTSPEV back to topmRNA from alignment at Scaffold_523:4153..9753+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2709_2a-0001 ID=EsuBft2709_2a-0001|Name=EsuBft2709_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5601bp|location=Sequence derived from alignment at Scaffold_523:4153..9753+ (Ectocarpus subulatus male Bft15b) ATGTTCGTGGAACAGAACGGAGGTTTCCAGGGGGAACTAAACCCCAACCA
CCTGGCAGTGATTCACTTCTTCAATATCATTTGAAGATGTTGTCGTTGCG
AGTGCGTTGCGTCCAACATGCAACCAGACGTTTCACGAGTACGCATTTCT
GTTTTCCTTGGTTAACACGAAGAGGTGGGATGCCCATTCGAACCCGGTTT
GTCGGCGGTCAATCAAAGACTAAATCCACGCAACGCCGCTGCTAAAAAGA
GGCTCGGCCTCGACAGACACGAGGAGAGACGTCCCTTACCGAAGGCCATC
TCTATAGCACTCGTATTTTCGATTTTTCAAACCATCAAAGTTGCCTGAAC
GTGAGACATCCACCTTTCCCTCATCGTAGTGCAGAATGTGCGCCCTCCAA
AAATTTTCAACGCTGCCGTGAACGCTAGACTAGCATTGCACAACAAGCTC
ACACGTACGACGTGTGGTTGAAACCTTGCACAACGTAGTGTCATCCTCGC
GGTCTGTTCATTGTTCAAAACGTCTCTTGCCACCCCTCCGTTCCGTGGTA
CGCGACGTCATTGTCAAGAATCGTTGCTGCAACCCGCGTGTGTCGTCGAT
GTTCAACAGGGAAGCCAGGATCGACATCACCTGCGAGCCCAAAAAGGACA
ACGTCATCGACTGGGATTGCATTTTTGTGAGTGGTGTACTTGGATTTTAA
TTGGGTAACACGTATGTAGATTTTCTTTGGCGAATCACCGCGACATTGAT
CATAGTACCACGTAACAGGTACAATGCGTTCGTTGAGAATGTCGAATCGG
GTATTCAGAACCAAGTGAATTTCCACCCACTACTACCTTTGGCGCTGTTG
GAAGGGTAATTACTCCATGCGCCACAGTTCATTGACTTGTCAATCGTGCT
GGTGTTTCTTTGCTCAGGTTAGTGGAAAGAAAGGGCGAAAAGGAGAGGCT
GCACGTTTCATTCGATCTTGAACTAGATAGAAAGGACAGATACACGTTTC
GTAGACGTTCTTGACACGTTCCGTGACATCTTGAGTGAACCGTTGCTTCA
TTTTCTCGTACAAGTTGTCCGTCGCCAACAACACGAGTGTGGCGACAAAA
AATGCATCCGAAGTTCACGCATTCCGCCCGGGGCAGTGAAGTTGGTTGCC
GTCCCCCTCATCAACGTGCTGAGGACAAATACTCGTTCATCGTCACCACC
TCGATTTGACTTACTGAAGGGCGAAGATTCGGAGGAGGAGGTTCTCAAGT
ACAGGAGCAAGGACAAGAAAGAGAGGGCGACCCACACTTCGTGTACGGAC
AAAGACCGCCCGTGCTCCAGGTGAAGGTTTTGCTCAAGGAAATACCTCGA
AACGCCATCCAAGCGTCCGGAAACCTACGGCGTGTGCGCTCCAACTCCAC
CCTAGTTTCAGCTGAGATTGCCACACAATCAGCCGTGGCAAGGCCAAAAC
ATGTGACACGCTCGGAATCAAGCGAAGTCTGGGATTGAACTCTCCTGCAA
GTAGGCGCCAAACGCTGGTCCACACAAGCAAGCCTTTGTTTGTAGCGCAT
GCTATTGATCTCGTTAGTATGCGTTGCGGATCGTACGCATGCTGAAGACG
AACTTTTGGATAATACCGGTCTTTGCCATGATCACCACGAATTTGAAGAA
CTTTTGGGTTCATGCGCTGCCTCGTGTTCAATTGTACTTGTTCTATAATT
CGGCCTGACAACAGGTTTATCGTTCCCAAGAATGTGCAGAGAGCAGAAAC
TAAAGTGGCTTACGGGCCCGAGGGCTTCCCCTTCCTCAAGGGCGAGAGGT
ACATCTACAAGTACAGCTTCCGCGCGGTCGAGGGAATGAAGCTCGGCAAA
CGTTTTACGCATATTGGCCAGATCGTGAGTGATTCAACAGGGAAAATGTT
TCGTAGAAAAAAATTCTGATATTTCTTCCTTGAAAGTCAAGGACTGCTTT
CTTGTTGACTAACCTCGCTGTGCGTCTGCGGTACCCGTGCAGCAGATACC
CCGTCGAGAGACGGCAGAAAGAGCAGAATATCGAGACCGGACCACTGGCG
TGGCGGATACATCCAGTGTTTGAGTTAAACACGGTTTTGCTCCCGAACCC
CGGTACACAGAGAGAGGGGGAGAGAGAGACACAGAGAGAGACAGACAGAC
AGACAGACAGACAAGACAGAAAAAATGATTCCGTACGCCCATGTGTCCGT
CGAACATGCAAAAACGCGGGGGTGCCTGTGGGGGGAACGTGCACGATGTT
GGGCAGAAAGGCGCCTACAACGGAGGGCAGACGGTGGACGGAGACCCGAT
TGTATCCATCAGTGCCAACCTCGACGGTCTCCATGTTCGCTTCTCCAACA
TTGACAAGACCATCCCCGACTACTACACCCATGACAGCTGGTGCGTGGCC
GATGTTGTTGGTTGACGGAAACGTGTGAGCCCCAATCTATAGACCTAGTC
TTCAGCGACAGGCAAGCAGAGCGAGCCAGAAAGGTATGAACCGTTTCAAA
TCAGGAGTGTCAACGTCCCTTCCCAATTCACAAGATCAGTAATCGGTTCC
ATTCCATGTTGTGTAAGGACAGGTACCGGAATTGGGAGGACGCCACGGGA
GAATGGGTGCACGTGACGATCGACACGGTCTTTGGGGAGTTCATGGAGGT
CAGTTGCATTTACGTATTATTATTTATGCTCACACATTGTTGAGAGACCT
AAGATGGCGTGGCTTTTTTGAGATGGAGACTGAGAGTGTCCATTGCGTGC
CTCGACAATATGGATTTGGGGTCAAAGCAGTGGATGACCTCTGCTCCCAG
CCATGTAGAAGTTTGTTCGTAGTTGCTCGCCACCTCTCACTGTTTCACGA
GCCATCCGACAAAGCAGGGACGAATGCCCAGCCAATTGCGCTACAACAAA
CAACCGAACGCTCAGGTAGTTCGCATGAAAAGCGAATCTAACAGAGTTTT
CGCACGATTGAGAGCGAAGTTTCCGATTGAGAGTGAGAACCAAAAAAATT
GAAAATTCGGGTCCAGACGCCTCCCGTCATTTCTCGGGAAGTAGGGGACG
GGCTCTTCCAAAAAGCGGCGCAAATTGAAGCTCTCTTCAGCAGCTTCGGG
TGCATATATATATATATATATATTTTTTTTTTTCTCCCATCATTGGACTC
TGTCGTCTGCCCCTCTGGCCCCTATCCTCCACTTCTACTAGCTAGACGAC
CCAACCGGGGTCACAAAGGAGGGGGGGGTTGGACCCCCTCCTGCGGTTCA
TGCCTGAGGTATTTTTATCGCGAGAAGGGTACAGCAATCCCTTCCCTCGC
GACTTACGAAGTCGATTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTCACTGCGATCGGCTGCAGGAGCG
AGGAGCTACGCACGTTGCTAGATTTCCCCAGATTGGCTATTCCTGCCCCA
AACTGTTTGAGGGCGCTGTCGCCCGGCGCGGAAGGCTCTCCCGTAGCTTC
TGCTCCGCGGTGTAGCTCCACAACGCGTGACTCTCGCAGGGATGAACAGG
GTATCGGCTTGTAGCTATGGGCAAGCCCTTCCATTCAAGTCGCACAGCAA
GCTCTACCTCTCAGCAGTAGACAAGCTACATCGTATCGCACGATCTCGCT
CTCAATCAGATACTTCGCTCTCAATCGTGCGAATATGTTGTTATCTAAGG
ATATTCTGGATTTCTGTTGTATATGCCAGGTGGAATTCGCAGGGGGCGTG
AGCGGGAAGTTCGTCTGGCCTAAGGATAAGACTCCTGTCGCCTGGAACAA
CAAGGGGAAAATGGCCAGAATGAAGCTAGGGCTGTACCATAAAGAGGAAC
AAGTTGGCGACGGCGAAGTCGAGATCAGGGATGTCTCCATCGAAGGGCCG
AACGGCATTATCCGCACGAGTCCAGAGGTATAAAACCTAGCGCTTGCTCC
GAGAGCACCAGGAGAATAAAACCGATGGGTCGCCTGCTTCATGTCTTCAT
ACGTTGCGGGCGGTCGCCTAGGTCACTCAGCGACTGACAAAAATGTTGAA
CAGTCGAGGGTTCGAACTGACCACCTGTACAATCTTTCGGGCCTCTCGTT
GTATGCGTCCTGCACTGCTCTCGTTCTTTCGTGTTCAACGCCACGCCAGG
AGTCGCCATCGCCCAGCTCAAGTGAGAAACACCTTTCCACGCGTTGCACT
AGTCGCCAAGCGCTCATCTGTGTATTGTATGTATCACCTGGGCATTCCGT
TTTACAGCGCTTTGCCAACAGCGCCAACCCACCTAAGCTAGAACGGAGGG
TGGACACCGTTTTTCACCAACCGCTGGGGAATGTAAAACACACCACCCCA
AATATAGCCCCCATAGTATGCGGTACCAAAGACGCGTGACGCATGGACGA
GTGGAGTGAGGATAGCTGTATACTGAAACCTCAAGGGCTGAGTGAGGTTT
AAGATTGCCAGACACATGGACGGGTTGAGTGGGGATAGCTACATAATGAA
ATCCCATGGGTTGAGTGAAGTTGGAGTGCCGGACACATAGAGCCGTTGAG
TGAGGATAGACACATACTGAACCTCACAGGTGATTTGTGTTAGAGATTGC
CGGACACATAGACGTGTTGAGTGAGGATAGCTTCATACTGAAACCTCACA
GATACGTTGGTTTTTGAGTTTGCCAGACACATAGACGCTTTGAGTGGGGA
TAGCTGCATACTGAAACCTCACAGGTGGTTTGTGTTGGAGATTGCCGGAC
ACATGGACGTGCTGAGTGGAGATAGCTGCATACTGAAACCTCACAGATGG
AATGATTCTTGTGTTTGCCAGACACAAGACGCACTGAGTGGGGATAGCTA
CATAATGAAATCCCATGGGTTGAGTGAAGTTGGAGTGCCGGACACATAGA
CGCATTGAGTGAGGAAAGACACATACTGAAACCTCACAGGTGATTTGCAT
TGGAGAGTACCGGACACGTAGACGTGTTGAGTGAGGATAGCTTCATACTG
AAAGCTCACAGATGCATTGGTTTTTGAGTTTGCCAGACACATAGACGCTT
TGAGTGGGGATAGCTGCATACTGAAACCTCACAGGTGGTTTGTGTTGGAG
ATTGCCGGACACATGGACGTGCTGAGTGGAGATAGCTGCATACTGAAACC
TCACAGATGGAATGATTCTTGTGTTTGCCAGACACAAGACGCACTGAGTG
GGGATAGCTACATAATGAAATCCCATGGGTTGAGTGAAGTTGGAGTGCCG
GACACATAGACGCANAGTTTGCCAGACACATAGACGCGCTGCGTGGGGAT
AGGTACATACTGAAACCTCAAGAGTTGAGTGATGTTGGATAGTGCCAGAC
ACATAGACGCTTTAAGTAAGGATAGCTGCATATTGGGACCTAACGGGTTG
AGTGACGTTTGCGACTGCCGGACACATGGACGCACTGAGTAAAGAAAGCT
GCATACTGAAACTTCAAAGGTTGATTTGTATTGGAGATTGCACGACACAT
AGACGCGTTGAGTGAGGATAGCTGTGTACTGAAAATCCACAGTAGCTATA
GTGAGGGGACAATTCGAGAATGCAGTACACATAGACCCGACCCCCAATCC
G back to topCoding sequence (CDS) from alignment at Scaffold_523:4153..9753+ >EsuBft2709_2a-0001 ID=EsuBft2709_2a-0001|Name=EsuBft2709_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=975bp|location=Sequence derived from alignment at Scaffold_523:4153..9753+ (Ectocarpus subulatus male Bft15b) ATGTTCGTGGAACAGAACGGAGTGTCATCCTCGCGGTCTGTTCATTGTTC AAAACGTCTCTTGCCACCCCTCCGTTCCGTGGTACGCGACGTCATTGTCA AGAATCGTTGCTGCAACCCGCGTGTGTCGTCGATGTTCAACAGGGAAGCC AGGATCGACATCACCTGCGAGCCCAAAAAGGACAACGTCATCGACTGGGA TTGCATTTTTGTGAGTGTGAAGTTGGTTGCCGTCCCCCTCATCAACGTGC TGAGGACAAATACTCGTTCATCGTCACCACCTCGATTTGACTTACTGAAG GGCGAAGATTCGGAGGAGGAGGTTCTCAAGTACAGGAGCAAGGACAAGAA AGAGAGGGCGACCCACACTTCGTGTACGGACAAAGACCGCCCGTGCTCCA GGTTTATCGTTCCCAAGAATGTGCAGAGAGCAGAAACTAAAGTGGCTTAC GGGCCCGAGGGCTTCCCCTTCCTCAAGGGCGAGAGGTACATCTACAAGTA CAGCTTCCGCGCGGTCGAGGGAATGAAGCTCGGCAAACGTTTTACGCATA TTGGCCAGATCAAAGGCGCCTACAACGGAGGGCAGACGGTGGACGGAGAC CCGATTGTATCCATCAGTGCCAACCTCGACGGTCTCCATGTTCGCTTCTC CAACATTGACAAGACCATCCCCGACTACTACACCCATGACAGCTGGTACC GGAATTGGGAGGACGCCACGGGAGAATGGGTGCACGTGACGATCGACACG GTCTTTGGGGAGTTCATGGAGGTGGAATTCGCAGGGGGCGTGAGCGGGAA GTTCGTCTGGCCTAAGGATAAGACTCCTGTCGCCTGGAACAACAAGGGGA AAATGGCCAGAATGAAGCTAGGGCTGTACCATAAAGAGGAACAAGTTGGC GACGGCGAAGTCGAGATCAGGGATGTCTCCATCGAAGGGCCGAACGGCAT TATCCGCACGAGTCCAGAGGTATAA back to top
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