EsuBft2660_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft2660_3a-0001
Unique NameEsuBft2660_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_627contigScaffold_627:438450..449793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FZ21
ProteomeIdEsuBft2660_3
Protein domainsIPR027417
Protein domainsPTHR11259
Protein domainsIPR006762
Ownerapollo_admin@sb-roscoff.fr
Noteras-related gtp-binding protein d os:homo sapiens gn:rragd pe:1 sv:1 [Automatic annotation]
Nb exon12
Max annot lvl2759|Eukaryota
Length1833
Hectar predicted targeting categoryother localisation
Evalue3.42e-197
EggNOG OGsKOG3887@1|root,KOG3887@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameRRAGD
KEGG koko:K16186
KEGG Pathwayko04140,ko04150,map04140,map04150
GOsGO:0000166,GO:0000228,GO:0000287,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000785,GO:0000790,GO:0001101,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005764,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005813,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006351,GO:0006355,GO:0006357,GO:0006396,GO:0006725,GO:0006807,GO:0006914,GO:0006915,GO:0006950,GO:0006995,GO:0007049,GO:0007050,GO:0007154,GO:0007165,GO:0007264,GO:0007275,GO:0007568,GO:0008104,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0008380,GO:0009056,GO:0009058,GO:0009059,GO:0009267,GO:0009605,GO:0009719,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010008,GO:0010033,GO:0010243,GO:0010259,GO:0010467,GO:0010468,GO:0010506,GO:0010507,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010647,GO:0010648,GO:0012501,GO:0012505,GO:0015630,GO:0016020,GO:0016021,GO:0016049,GO:0016070,GO:0016237,GO:0016241,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0018130,GO:0019001,GO:0019003,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0031090,GO:0031224,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031330,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032006,GO:0032007,GO:0032008,GO:0032501,GO:0032502,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032774,GO:0032991,GO:0033036,GO:0033043,GO:0033365,GO:0033554,GO:0034198,GO:0034448,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035556,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042594,GO:0043085,GO:0043087,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043200,GO:0043201,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0043562,GO:0044087,GO:0044088,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044430,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045786,GO:0045893,GO:0045935,GO:0045944,GO:0046483,GO:0046872,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051020,GO:0051128,GO:0051171,GO:0051173,GO:0051179,GO:0051252,GO:0051254,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051726,GO:0060255,GO:0061919,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071229,GO:0071230,GO:0071233,GO:0071310,GO:0071417,GO:0071495,GO:0071496,GO:0071704,GO:0072657,GO:0072665,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0097708,GO:0098588,GO:0098796,GO:0098805,GO:0098852,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902115,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1903432,GO:1903506,GO:1903508,GO:1903778,GO:1904262,GO:1904263,GO:1990131,GO:1990253,GO:1990928,GO:2000112,GO:2000785,GO:2001141
Descriptionregulation of TORC1 signaling
COG categoryS
BRITEko00000,ko00001
Cross References
External references for this mRNA
DatabaseAccession
GO0032008
GO0034448
GO0046982
GO0031902
GO0008219
GO0000790
GO0005764
GO1990131
GO0045944
GO0005525
GO0008104
GO0003924
GO0007264
GO0019003
GO0000329
GO0006184
GO0016237
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft2660_3aEsuBft2660_3aEctocarpus subulatus male Bft15bgeneScaffold_627 438450..449793 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2660_3a-0001-exonagat-exon-49427Ectocarpus subulatus male Bft15bexonScaffold_627 438450..438468 +
EsuBft2660_3a-0001-exonagat-exon-49433Ectocarpus subulatus male Bft15bexonScaffold_627 438640..438730 +
EsuBft2660_3a-0001-exonagat-exon-49434Ectocarpus subulatus male Bft15bexonScaffold_627 439590..439656 +
EsuBft2660_3a-0001-exonagat-exon-49432Ectocarpus subulatus male Bft15bexonScaffold_627 440219..440315 +
EsuBft2660_3a-0001-exonagat-exon-49437Ectocarpus subulatus male Bft15bexonScaffold_627 442302..442387 +
EsuBft2660_3a-0001-exonagat-exon-49429Ectocarpus subulatus male Bft15bexonScaffold_627 443353..443451 +
EsuBft2660_3a-0001-exonEsuBft2660_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_627 443766..443898 +
EsuBft2660_3a-0001-exonagat-exon-49431Ectocarpus subulatus male Bft15bexonScaffold_627 444327..444418 +
EsuBft2660_3a-0001-exonagat-exon-49428Ectocarpus subulatus male Bft15bexonScaffold_627 445387..445542 +
EsuBft2660_3a-0001-exonagat-exon-49435Ectocarpus subulatus male Bft15bexonScaffold_627 447578..447663 +
EsuBft2660_3a-0001-exonagat-exon-49430Ectocarpus subulatus male Bft15bexonScaffold_627 448492..448630 +
EsuBft2660_3a-0001-exonagat-exon-49436Ectocarpus subulatus male Bft15bexonScaffold_627 449026..449793 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2660_3a-0001-cdsEsuBft2660_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_627 438450..438468 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2660_3a-0001-exonagat-three_prime_utr-10728Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_627 449074..449793 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2660_3a-0001EsuBft2660_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_627 438450..449073 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft2660_3a-0001 ID=EsuBft2660_3a-0001|Name=EsuBft2660_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1833bp|location=Sequence derived from alignment at Scaffold_627:438450..449793+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGTTTGTTTCCACAGATGCGGAGGAAAGGCAAGAGGTAGAGGAGGCGCC
TTCCGGGGAGACGCACGGGGCGGACGCCAAGCCGAAGATCCTTCTCATGG
GCCCCAAGAGATCCGGCAAATCTTCGATCCAGCGAGTGGTGTTCCAGAAG
ATGTCTGCCCACGAGACCATGTTCCTCGGCAATACTCAAAGCCTGGACAT
CAAGTACGTGGCCAACAACGACTACGTACAGTTCCAGATCTGGGATTTTC
CGGGAGACTACGACCCCGCCAACGACAAGTTGATGTACAACGGTGAGATG
GTGGAGGCAACGTCCATCTTCACGGGGGTGGCGGTCCTGGTCCTGATTGT
CGACGCACAGGAGGACCCAATCGACGAGCAATTAGGCGGTCTGGTGAGCG
TCGTCAAGAACGCCTGCCTTGTCAACTCCAAGCTGGCTGTCGAAATCTTC
ATACACAAGATTGACGGAGACCTTTACTTGACGGACGAGCCCAAGGAGGA
GTGTCTGCGAAACGTCCAGAGCTACATCAACGCGGCCTTGTCGTGGAGCA
ACACCGACATTAGGCTGCGATACCACCTCACCAGCATCTACGATCACAGC
ATTTTCGACGGTCTCAGCAAGGTCGTGCAACTCCTCATCCCGCAGCTGCC
CACGCTGGAGAACATGCTCAACGCCCTCATCTCAAACTGCATGATGGAAA
AGTCGTTCCTGTTCGACGTGTACTCGAGGGTGTACATCGCAACCGACTTC
AACCCCGTCCACATGGCCACGTATGAGCTTTGCTGCGACATGATCGACGT
GGCGATCGACGTGTCGTGCATCTACGGCGCAAGCGACGAGGAGGGCAAAG
AACCGTACGACGATCATTCCGCGAGCATTTTCAGACTGAGCAACGGGACA
GTCCTCTACTTGCGCCAAGTGGGAAGCTACTTAGCGCTGGTGTGCCTGAT
GCAAGCAGACCACTTCAACGATAAAGAGGGTCTGATCGAGTACAACGTTA
ATTGCTTCAAGGAGACCTTGGAAGAGGTATTCCGACCTCTTCCAATGCCC
AGGCCGCGAAGAAAGGGTGCGCGCTCATCAGCCGCAGGGGCCCCGGGGTC
AGGGCGACCATGATGACATGATGACGTACGGCCGTCGAGTCTTGTTCCTG
CTCTGTGTAAACCCTTCCAACCGAAACGTGCGTTTGGACGTTCGCGGTCT
TTTTTTTTGGTGTGGTGGTGCATTTATTTTTATGTCATGTTTTCTGTGTT
CTTTTGCTCTGTTGAAACTCTTTCGCTGCAAAATACTTTGTATGTGTCAG
GGAAATTATAGCCTTCTCGGACCACAAGGGCCGCCGCCGTACGTCGGTTT
GCGCCACAACAGCGCCCCTCACGGACTGCTGCCGTTTTGTGTGAGACAGA
GGCATTCATTCGGATGTTACGTTACGTTGCGTTTTTTTTTTTTTCTGGAA
ACTGTCGTCTTCTCCCGATAACGGCGCGAACGGGTCTCCCTGTCTTGTAC
CATGCTGTGTCGTGTGTTTTTGGTGTGTCTTTGAAATGAATGGTAGGTCG
ATCGTATTTGGTCTAAATTTACCGATTTGTGCTTCGTAGGGCTTGTGCTG
CGGCGAGGACTCCAAGCAAGTACCGTAGATGCCGTTGATGGTGGAAGACC
ACCCATCCCCCCGGCCCCCTGAGCCACTCCCTCTACAGTAGGTCGATCGA
CCCTGGTCAGTGATGCCGGGCTTATCCTCTCTTCTCGCTTGAGCTTTGCT
GTTTTGTAGCTCGACGTTGCTCCTCTCGGCGGGGACTTGGCGGGTTTTGC
GCGCGGTGGCGGTGGGGGGGGGCGTACTCTCAT
back to top

protein sequence of EsuBft2660_3a-0001

>EsuBft2660_3 ID=EsuBft2660_3|Name=EsuBft2660_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=370bp
MFVSTDAEERQEVEEAPSGETHGADAKPKILLMGPKRSGKSSIQRVVFQK
MSAHETMFLGNTQSLDIKYVANNDYVQFQIWDFPGDYDPANDKLMYNGEM
VEATSIFTGVAVLVLIVDAQEDPIDEQLGGLVSVVKNACLVNSKLAVEIF
IHKIDGDLYLTDEPKEECLRNVQSYINAALSWSNTDIRLRYHLTSIYDHS
IFDGLSKVVQLLIPQLPTLENMLNALISNCMMEKSFLFDVYSRVYIATDF
NPVHMATYELCCDMIDVAIDVSCIYGASDEEGKEPYDDHSASIFRLSNGT
VLYLRQVGSYLALVCLMQADHFNDKEGLIEYNVNCFKETLEEVFRPLPMP
RPRRKGARSSAAGAPGSGRP
back to top

mRNA from alignment at Scaffold_627:438450..449793+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft2660_3a-0001 ID=EsuBft2660_3a-0001|Name=EsuBft2660_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=11344bp|location=Sequence derived from alignment at Scaffold_627:438450..449793+ (Ectocarpus subulatus male Bft15b)
ATGTTTGTTTCCACAGATGGTACAAGATCCTTGGCTGACGGTTGACTACT
ACAAAACAGTAGACTGTATCTACTGCTGTTGTGCCTCCCATACGTGGCCG
GTAGACAGGGATGGAAACGTCCAACAGCGTCCGATTCTGACTGAAGCTAT
CGGCCGTGACGCCTTAACGTGCACCGCACCCATGTATCAGCGGAGGAAAG
GCAAGAGGTAGAGGAGGCGCCTTCCGGGGAGACGCACGGGGCGGACGCCA
AGCCGAAGATCCTTCTCATGGGCCCCAAGAGGTGCGTGCTCGAGCGCCTA
TGCATACAAGAGATGTCCCGTTCGACATCAGGCATGAAGTAAGCTCACCG
GACGTGAACGATTTCGTTTTTTTTTTGCAGCAGTCGAGAGAAGAACTGTC
AGTTTTACGGCTGTGTGTGTGAGCGCTGATTTAAGGCTATCAAACCCAAA
GGAGGCGGGGGGTAGGGCCAGGTCAGGAAGACGAGCTTTCTTTTCTCTGG
AAGAGAGGGGGGAGACACGCCGTTGGTCGGTACGCAAGACAACAATCGAA
CTCTACGTGGCCGTGCGTAAATGTGGCCCTCTTTCGTGTACAACATGATT
TTGATTGGATGGGAAAGGAGAATTTAATTTATTGGGGAAGGAGTGAGAAT
CGAATTGTCAGGTAAACCTGCGGACTGGATCGATCGTGAATGTCTCGCTC
TGACTCGAGGTGGCTTACGAAAGGCAAGCCCGCCTGTTATGTCGAAGGAG
CCGGAGTAGAGACAGCTGTTCTCGTGGTAACAGGCGCCAGAGTGATTCTC
ATGGTATCGTGATGTGGAGCACGAAGAGCGGTGGTTGCCTCGTTCTCCAT
CGCTGTTTGTGTCATGGCCGCCGATGGCTTGCTCTTGCCGCCTGAAGGAA
AAGGCTGCCGCATGGGACGGTAGCTGCGGCAGTCGTGTGCACAACTGCGC
GGAAATCTTTTCGTAATTCATTGCCTGCAGCGGAGTATCGCAGGCAGAAA
TGTGGCTTCGATTACCGCTTGAACCACAGGTTTGTGATCCCCCTTCCCGC
CTCGGTCGTTTTACGTTATTTTCTCGACGTGTGTGTACAACCCTGCCTCT
TCTTCGTCTGCCGTTGTGGCTTTTTCTGGCTCATGGACAGATCCGGCAAA
TCTTCGATCCAGCGAGTGGTGTTCCAGAAGATGTCTGCCCACGAGACCAT
GTTCCTCGTGAGTATCGATAGTGCTTGTGGTTCGATAGTCCAGTGTGAGC
AGGACTAGCGTTCTACTCGTCGTTGCTCGCGGGTGCAAAGTTTGCTTCAG
AGCACCGGTTGAGATTCCGTCCCTCTTCCTACGTTGGCCCCAACTACGAT
CGTGCTCCCCGCAAACAGCACCAAGCACGGCAGTCGCTTGTAGCGTGTAC
TTGTCGCAACATGTGTGTCCTGTCAAATTGCATCGGAACACGCCGCCTCT
TCACATGGGGGCTACCCGACCGGCCTCTCTCCTCACTATTGGTCGTTGGT
ACAGGAACATGCGCCCTCTCGCGGGGTTATGCACGAGGATCACTGGGCAT
TGGCCGTAAGTTGGGCGAAGCAGGTTCTTTGCGGACCGACATGCCAAGAT
AGCCCCACCATCATGTTTCGAACAAGCCCCGCGGTTTTTGTCCGGTTGAT
TGTTGCACCAGCGGTGTCTGCCCTCGCGGGGCACAACCCAGGACCCTCCA
TAGGGGTTGCCACGCACTCCTGATCACCACACCTCCCCCCCTACAACCGC
GGATCAAACTTGGTGTCAGGGCAATACTCAAAGCCTGGACATCAAGTACG
TGGCCAACAACGACTACGTACAGTTCCAGATCTGGGATTTTCCGGGAGAC
TACGACCCCGCCAACGGTAAGCCGTTCCAAGGTGGTCGAAACCCCCTGCC
TGCCTTGCTCCCTTCTCGCCTTCTGCATATTGCTGTTGTCTCACGGAGGT
TGGTTCTTTGTTGTTTTTGTTCAGCACCGACGGGGGAATTGAATGAAAAT
TCACGAGGTAAACCGTAATGGTTTGGTTGGGGTGGGAGGGGATTTTGATG
TTGTTGTTTCCTGTATTTCTTTTCCTACGCGGGGACAAGCGCTGCTGCTT
TTTTGTTGTCCGCGCTTAGATGTTTCTCCGCTCGTTTGTTGAGTTTTCTT
TTTCTTCATTCGGGAACAAGCGCTGCTGCTATGTTTTTGCTGTCTGCTCT
TAGTTTTTCTCCACTCGTTTTGTTAGGTGGTACACGAGGAACGAAAAAAA
TGAGGACAACACATTTGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTA
CAACATCGTTGCCAAGCGACGATAACCCAACCCCGATGGCAAACACCGAG
GGGGACGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCC
CGATGGCAAACACCGGGGGGGGGAGGGGGGGGCTGAAAACCGAACAGAAT
CGTCATGCAGGTAAACCGGCGTTTCATGTCAACCTTGTTTCTTGTAGTGT
TTGCGCTGGCGGCCCGCTGGTAAGACATTTCGTAGCTCGGTGTGCGTGTT
TGTACGTGGTACATATTCGCTAAGCTGAGATTCATTTCCACTGAACAGAA
GAAAGCGAAGGGCGTTGTGTCACTTCGCATTCCCCGTCTCAAGAACGTTC
TCTGCGGCTTTTCTGCGGCAAGGCTTTTTGGGTGTCGAAACCCCGCCTGC
TTTCTTCGTGACAAAACCCACTCATCCGCCTGATTTTTTCTTGCTTTTTT
TTTGTCTCACAGCTCCCAGGCGATGGACTGTAACCCTTCATTTTCCCTCC
GTTTATCAGACTCGCACTCGGCGTTGGCACATTAATGAACCTAGTCTCGC
CCCCCCCCCCCCCCCCCCNATGCGCGCGCGTGTGTGTCGTCGTCGTTGTT
GATGTTGTGGTTGTTTTGGTGGTCTGAAATTATCGCGATGGGAACAAGCC
AGACAAGTTGATGTACAACGGTGAGATGGTGGAGGCAACGTCCATCTTCA
CGGGGGTGGCGGTCCTGGTCCTGATTGTCGACGCACAGGTGAAATAGACG
AGATGAGATACAGCATGTCTGCCGTGGGTCCTGTCCTCTAAAGGGCCTGG
TTGTCGTGGGACAGTGCAGGGGGTTGGGTGAGAAGGGCGGGCGAACTCTC
TTGGCGCAGGTTGAACCGTGACAACTCTTTTTTTTAAATTGTTTTTTTAT
GGAATCGGTAGGGTGGGCGGGCGGAATCGGCCTGGTGTATACAGGTATAA
ACGTCCATTTAGTAGGGACCCCGACTGTGAGTGACAAGAAGGCAACAGCC
GCTCGCGTGAACAGCGTCCTTGACATCTACCAACAACGCCACTTAGGGCA
TGTTGTCGTCATGTCTCGTGCTCAGGCGATGTATGCCCGACGGGAGGATG
CCATGGCTACAAACCATGCAGACACATCAGTTTCGTGTTGAGCTTGGAAA
AGTAAGCCTTCGGTTTTGTTTTGGGGTGAATGTCGCATGTATTCCTCTTG
CAATAGTGCCAGCCCCTTCCTGGTCCGTAGGGAAGACAGCAGTTGTTGTT
GAAGCGTCGTGTCTGCGTTTCTTGCTTCTTGCAAGTGGCATCTGTGTCCT
GGCTCTCTCTCTCTCTCTGAGTCACATGAAAGCACATCTTTTCTAGAACA
CCGTTTTTTTTTTGTGCGTGTGTTGTTTTCTGTCAAGGCTCCCGTTGCCA
CTTTTCGGTGCTTGCCTATCCTATACCCCATTCGTCCAATAGGTACATCA
AGTCGATGAATTTCGTCGCCCCCTGCTTGTGTATTTCGTTTACCCCTTTG
TGGTCACAGGGTTGTCCGTACCCTTTTTTGGTCACCCCGTGATTGTGTCT
TCTGTTCACCCTTTTTGGCGACAGTATTATCCAGTCAAGAGAGGGCCCTG
CTCTTTTTACCATGCCTCATGCGGCGTCACCACCCCTTAAGTTTTTTTTC
ATGCAACACGAACCGACCATGTGGTTTCATGTACCATTTTCTTGTTTTGT
CAGGAGGACCCAATCGACGAGCAATTAGGCGGTCTGGTGAGCGTCGTCAA
GAACGCCTGCCTTGTCAACTCCAAGCTGGCTGTCGAAATCTTCATACACA
AGGTACCGGAGGGGTGGCCATTTTTTCGAACATGGGGATAGCAAGCTTGC
CTCCATGGACGTGGAGCATTTTTTCTCAAGACATTTGACTACGATGGACC
ACCTCCTTTTTGTGTTGAATCCCTACAGTAGTTCACCAGCGAAACACCGC
GACCAATATACATACAGACTTTCAGGGCAAAAGGGGGCGCGCAGGCCTTT
CTCCTGAATAGTTTTTGTTTTTGCGAGCTTGTGAAACGAAGGTTGCCCCT
AAGTACCGAAGTTTGCTGTCAAGTATTTTTGTGTGTTGGTGCCGTGTCGT
GGGTCGAATGCGACAGATTGACGGAGACCTTTACTTGACGGACGAGCCCA
AGGAGGAGTGTCTGCGAAACGTCCAGAGCTACATCAACGCGGCCTTGTCG
TGGAGCAACACCGACATTAGGCTGCGATACCACCTCACCAGCATCTACGG
TAAGCAAGGTGTTGGTTCTGACGGGCATTGCTGGTGGTTGTTTAGTCGTT
GTCGTTATCGTTGTCGTTGTTGACGTTGATGATGATGATGATGATGATGG
TGTCGCTCCTGATGTTGCGGTTGTTTTTGCAACGGTTGGTTGTGTGGGTT
TTGCTGGTGCTGTGCTGGCCCTGTCCACGGCCTGTGCTTTTCGATGTTCG
ATGGGTTTTATTCTCTCATTTCGCGTTCGGACGCGCTGGGCTCGTGGCAA
AATGTGGTTGTGCCTTGTTGGAGGTTGCTGTGGCCCGCTTTTGCTTGAAG
AGATGCGCATCGGAAACGTCTTCTCACGTTGACAATCCACAAAGAGCCGT
GCCTGCCCGCACTGTTACCCCGGCCCCAGTCTTGTACGTACGTGAGCCAC
TGACAACCTTGCCTGTGTTTTTGGCAGATCACAGCATTTTCGACGGTCTC
AGCAAGGTCGTGCAACTCCTCATCCCGCAGCTGCCCACGCTGGAGAACAT
GCTCAACGCCCTCATCTCAGTAAGAATCTCGCGACCAAATGTACCGGCAG
GCTGACTGCCTTGGAGTCGTGTGTGAAGGGGGTGCGTTTGCTCTCGAACG
TTGTGAATGGAATTGGACACGACAGCCGCTGTGCTTGGGTGGAGTCTAGG
GAAGGTGTGGGACCACGCTCCCGATTCGTGCGGTTCTTTTGGCAATGATT
GGTGAATCATGCCGACACGGTTTTTCTAGTTCGTGCTGCATATTTTTTTA
GATTTGTAAAGTAGAGAGTTGGATGTGTGTCGTAGGTATAGCGGAAGAGG
AGCGAAGTTGGTGTGCGCAGCATGGCCGCCGTTGCATTGCGTGGCCACCA
AACTCAAAAGTCAACAACCAACAGCGTGTGCACCGTCGTACAGGGTTACG
GTTTGCGATAGCCTACCTCTACCTTGTAAATGTCACCCGCACTGCTGTGT
GATCGTCTTGAACATTTCGTTCGCTCTCTCTTTTTTGTTTTTTCCCAACA
TTAGATTTCACACGTTCGTTTGCGCATGTAATTGAAACTCAGCCTGTATC
CTTTGGAACCCGTCGCAGCCCTCAGCTGTCTGTTGCCCGCGCTTGATGTA
GACTTTCAGCATCAGTCAGCTGCCGTGCATCTAGAGCGTGACGTCTACCC
TCTCTCCTGCCCCGGGAGTTATGCTGCAAGCAGGCGGCACTACCATTGAG
ATGTGGTGCTCGTACGCCGGCCGTCCATTCTTTTTGTCCCGTTCGTTGTC
CGTCTCTACACATGACATCGATGCTTCGTTTTGTTTTCACGAGACTAGGG
GAAATGCTTCTAATCACCGAGTTTTGTGGTTTGGCCCCCCCTGCGCTTGC
TTAGAACCAGTGTTGGTGCTGGTGTACGTCTACGCCCGGCAGGTTTTTTG
CACTGGTAGACGAATGAAGCAGTGAACGTATTGTGGCGAACGCTTGTGTT
TACCCTTAACTTCTGTCTGGTGACGAACAAAACGCAGAACTGCATGATGG
AAAAGTCGTTCCTGTTCGACGTGTACTCGAGGGTGTACATCGCAACCGAC
TTCAACCCCGTCCACATGGCCACGTATGAGCTTTGCTGCGACATGATCGA
CGTGGCGATCGACGTGTCGTGCATCTACGGCGCAAGCGACGAGGTGCGGT
CGGGGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGGGGGGGGGGGGGGTGCGGAGGAGGGGGGGGGAACACGTAC
TCTGCTGTAGCTTCCTCCCTGTGTGTTGTTTTGCGATTGATTTCGTGTCT
TTTCAATGCTTAAGTAGGAATTTGTTCCTTGCGATCGATTATTATAGTGT
CCTCTCTCCGCTTGTCGAGTTAGGGTTGGTTGGCTTTCTCTTGCAACAAG
GACGGTAGTGCACCATCCTGGCATCGATCCGGTCTCTGTTCCGTGGCCAT
TTATTTCTTGGGGCTGTTCCTAGTGCTCACTCTCGTCAGGTCATGTATGA
TGGCCAGGGCTTGTTTTTTTGCTCCGTCTTTCTCCCCTTCTGAGATAAAT
TAAACACCCTTGAAGTACACTAAAATAGTTTTAGCGACCCCTCCGGAGAG
GGCTCCTGAGAGCACAGCAGTATCACCAAGAGGGGATGCAAGATGAAAGC
AACAGGACCAGCCCAAAGCATGCTGCTAAGCTTACACAGCTGACGTGTTT
TGACTCGAAAAGCCCCCGTATGAACCTTGACGAACCAAGAAGAAAAGGTT
GCAAATCTGCACATACAGTCTTGTTCTTGCGACACTTGGATACACACAGC
CTCACCGTTGTGCACGCCCCACCTTAATCCTGGCTAAAAAACAATACAAT
ACTGTATATACAATAAATACAACCCCCCCCTCCCCCCCCCGGTGTTTGCC
ATCGGGGTTGGGTTTTCGTCGCTTGGCAANNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNTCAAGCTTCGTGGACGTTCTAACTTACGCTATCACAGTATA
TCTATCTGCCACAGACCAAATCCCACAGCGGCAGTGTACCCGTAGATTCT
TGTAGCGACACATTTTTTTCCCACTTCTCTTGTACCACGCGATCGGCATC
GAATCGGCTCAAGATTGTCCCTTCTTCCTCCGTGTCTTGCTCGAATGTAG
TGTAGGACGGGACAGATGGCCTTGTGGCGTCAGGGGAGGGTTTTATTTTA
GGTTGCGTATGTCAATCACACCGTTTCACGCGTGCCTACGTTTCTTTTCC
CCCCCGCCCTTGTTTCTGGCGCTTGTTCCTGTTGCCGTCCGTTTCAAGCG
GTCTTGACCCCTTTCGTCATACGCATCCTTCCTTTCCCGATTTTTTTGTC
CGTTGGCGTGGTTTTTTTGAAACTCGATCCCCTACGGCCACGTTATTCTC
TCTCCTGTCATGCTCCAATACTGTTGTGTAAACAAACATTGTCTTTTGAT
TTCTGTTGTATCCTTTTTTCGTGCTACTGCTGTGCGTGTATACTTACGAG
GCTGTTGTGTTTTTATCCCCTTGCACAGGAGGGCAAAGAACCGTACGACG
ATCATTCCGCGAGCATTTTCAGACTGAGCAACGGGACAGTCCTCTACTTG
CGCCAAGTGGGAAGGTCAGTCAGTCTCTCATCACGCGGCCCGCCACTCTT
TTTTCTTTCTTTTTTCTTTCTTTATTTTGTTTGCTTTTTCTTCCTCTGGT
TCTGCCGCAAACATAGCCGTGGGTGTCTGAGATTTATTTGGTATTGTGTG
CGAGGGGAGGTGCTAGGTGTCGTAAGTCCATGTGTGACGTCATGCTTGTG
CTGGTGTTCTTGTGCGGGACATTGGCCATGAATCGTTGGAGTGCTGTCCT
GGCCCTGTAGCGATACTGGTATCGATAGTACAGTACTGTATCGAATCCCC
AACATGAGGTAGGCGTACTGTACTACGAAAGGTAAGGTTTGCCTGTGTCG
TCATCGCCCGTGTCGTGTACGTTACCGCCGTGTCTCCGATGTAAGGGGGT
GGTGCAACGAAGGTCCTCGACGCTCTTATATCGGAGCCCCCTCTTACATC
AGAACAAGAGAGAAGTCAACTATTCTAAAAAGGGTCGAGTCCGTGACCAC
CGATATCGACCCTCTTATGTCGAAATCCCCTCTGGTATAAGGCACCATCT
TATATCGGAGCCACGAATGTAGTCAGAAACGGAAGGTACTCCTATTCCCG
AATAAGCAGAACTAGAAGCAGTTTTTTTTTTTTTCCGTGGGATGCCGCGC
TGCACCGTTTTCCCCCCTCCTTAATTCACCACTGCCCTCCGACCGCGTTA
CTCTTCGCGCTGGTCTTGCGTCTTGACAGATATGTTTTCCCCGTTATTAT
AGCGATACCTTCAATCACGTGCCGTAAAGCTCGTGTCCGGTTGCGTTTAA
CCGTGCTTTCCCTCCTCGTTTCTCGTCTCTTCTTCTTCGCAGCTACTTAG
CGCTGGTGTGCCTGATGCAAGCAGACCACTTCAACGATAAAGAGGGTCTG
ATCGAGTACAACGTTAATTGCTTCAAGGAGACCTTGGAAGAGGTATTCCG
ACCTCTTCCAATGCCCAGGCCGCGAAGAAAGGTAATTCAGACGTTGTTGC
CCGAATGAGATGTTTCCCTTGCTCGAGGCGAACAAGCCATGGATGCTTGT
GTGCCCGGACAGTTCCAAGTTGGTGTACGTCATGTCCAGGCTTTTTGTCT
GGTGCGTGGATATAGCGGTGTCGCTGCTGCGTCTTTGTTGTTGTTGTTGC
ATCGTGGGGTTACCGTTTTGACCTGACCTCCTGTTCCCAGTACTGCCTCT
TCCTCGCCCTGTTGTGGTAGCATGTCATGGGCCTCAGTATCGCCCTCTTT
TTTTGTGGTATACCGTCTTGTGCTGCAGCTACTGCCGTATGAAGTTGCGG
TCTCCACTTAGACTCCCCTCCGAATTGCCAATACGCCTTACGCCATGCCA
CCGCCTACCACGTCTTTTGCGATCAGGGTGCGCGCTCATCAGCCGCAGGG
GCCCCGGGGTCAGGGCGACCATGATGACATGATGACGTACGGCCGTCGAG
TCTTGTTCCTGCTCTGTGTAAACCCTTCCAACCGAAACGTGCGTTTGGAC
GTTCGCGGTCTTTTTTTTTGGTGTGGTGGTGCATTTATTTTTATGTCATG
TTTTCTGTGTTCTTTTGCTCTGTTGAAACTCTTTCGCTGCAAAATACTTT
GTATGTGTCAGGGAAATTATAGCCTTCTCGGACCACAAGGGCCGCCGCCG
TACGTCGGTTTGCGCCACAACAGCGCCCCTCACGGACTGCTGCCGTTTTG
TGTGAGACAGAGGCATTCATTCGGATGTTACGTTACGTTGCGTTTTTTTT
TTTTTCTGGAAACTGTCGTCTTCTCCCGATAACGGCGCGAACGGGTCTCC
CTGTCTTGTACCATGCTGTGTCGTGTGTTTTTGGTGTGTCTTTGAAATGA
ATGGTAGGTCGATCGTATTTGGTCTAAATTTACCGATTTGTGCTTCGTAG
GGCTTGTGCTGCGGCGAGGACTCCAAGCAAGTACCGTAGATGCCGTTGAT
GGTGGAAGACCACCCATCCCCCCGGCCCCCTGAGCCACTCCCTCTACAGT
AGGTCGATCGACCCTGGTCAGTGATGCCGGGCTTATCCTCTCTTCTCGCT
TGAGCTTTGCTGTTTTGTAGCTCGACGTTGCTCCTCTCGGCGGGGACTTG
GCGGGTTTTGCGCGCGGTGGCGGTGGGGGGGGGCGTACTCTCAT
back to top

Coding sequence (CDS) from alignment at Scaffold_627:438450..449793+

>EsuBft2660_3a-0001 ID=EsuBft2660_3a-0001|Name=EsuBft2660_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1113bp|location=Sequence derived from alignment at Scaffold_627:438450..449793+ (Ectocarpus subulatus male Bft15b)
ATGTTTGTTTCCACAGATGCGGAGGAAAGGCAAGAGGTAGAGGAGGCGCC
TTCCGGGGAGACGCACGGGGCGGACGCCAAGCCGAAGATCCTTCTCATGG
GCCCCAAGAGATCCGGCAAATCTTCGATCCAGCGAGTGGTGTTCCAGAAG
ATGTCTGCCCACGAGACCATGTTCCTCGGCAATACTCAAAGCCTGGACAT
CAAGTACGTGGCCAACAACGACTACGTACAGTTCCAGATCTGGGATTTTC
CGGGAGACTACGACCCCGCCAACGACAAGTTGATGTACAACGGTGAGATG
GTGGAGGCAACGTCCATCTTCACGGGGGTGGCGGTCCTGGTCCTGATTGT
CGACGCACAGGAGGACCCAATCGACGAGCAATTAGGCGGTCTGGTGAGCG
TCGTCAAGAACGCCTGCCTTGTCAACTCCAAGCTGGCTGTCGAAATCTTC
ATACACAAGATTGACGGAGACCTTTACTTGACGGACGAGCCCAAGGAGGA
GTGTCTGCGAAACGTCCAGAGCTACATCAACGCGGCCTTGTCGTGGAGCA
ACACCGACATTAGGCTGCGATACCACCTCACCAGCATCTACGATCACAGC
ATTTTCGACGGTCTCAGCAAGGTCGTGCAACTCCTCATCCCGCAGCTGCC
CACGCTGGAGAACATGCTCAACGCCCTCATCTCAAACTGCATGATGGAAA
AGTCGTTCCTGTTCGACGTGTACTCGAGGGTGTACATCGCAACCGACTTC
AACCCCGTCCACATGGCCACGTATGAGCTTTGCTGCGACATGATCGACGT
GGCGATCGACGTGTCGTGCATCTACGGCGCAAGCGACGAGGAGGGCAAAG
AACCGTACGACGATCATTCCGCGAGCATTTTCAGACTGAGCAACGGGACA
GTCCTCTACTTGCGCCAAGTGGGAAGCTACTTAGCGCTGGTGTGCCTGAT
GCAAGCAGACCACTTCAACGATAAAGAGGGTCTGATCGAGTACAACGTTA
ATTGCTTCAAGGAGACCTTGGAAGAGGTATTCCGACCTCTTCCAATGCCC
AGGCCGCGAAGAAAGGGTGCGCGCTCATCAGCCGCAGGGGCCCCGGGGTC
AGGGCGACCATGA
back to top