Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2609_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 223 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2609_2a-0001 ID=EsuBft2609_2a-0001|Name=EsuBft2609_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2235bp|location=Sequence derived from alignment at Scaffold_373:57317..60889- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCAGGTCGCAAAGATGGGGGTGACTCTTCCAGCCAGTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCCTGGCCCTGAGGACGCGAGATA
GATCACTGAGGGATCAGATGAGCCAGGTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGGAAGAAGGAGGAGCCAGCTGGCACCATCGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGTGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAAGCTGTTGGAGAGTCTGGCCCGTCAGGGCGACACAGCAGCGAAGTAGG
GGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGCTCACAACCAAGATT
ATTGTAGTGCCATGGGAGATGACGGTGCTGCTGTTGGCTTAGGATACGGA
ACCACAACCCCAGCGATGGGTTACCAAAGTGTGAGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAATATTTCAACGAATAGCTAAATGATTTCCGCA
TGGCAGCTAATGGTGCGAACCTGTTGGAACACTTTGAAGAGAGCGGGAGC
TTTGAGATCCCCGTCAACAGCGGAAAGAGCAAGTTTTTGCTGTCACAGCA
GTACCGGAGCGAGCAAGTAGAGCTCGCATTCCACACGTGGAACGATCTGT
CTCACGCGTTGAAAGAAAAAGATCGGAAAATCATGAAGAGGGCAGAGACG
CCCTAGGGAGCTCTTCGTGAGCTCAAGACCATACACGACCCTGAATCATC
TGTACAGCCGTCAGAGGACCCCAAGTCCCTGACATCGACCAAGATCTCTA
GAGGTGAAAACCACCAAAACGCCCTAGATGAGATGCTCCAAACCTCAAAG
TCCTTAACCGAGGAAGGACTAACTGTCAACGAAACGTTCGTCCTTCACCT
CTTCTTGGATGCCCTTTCGGACGAGTATGCCATGACAAAGCACAACCTGC
CACACGCGAAGGAGTTGACGCGGACAGGTGTGCTAAAGGAAGAAATGATC
GAATACAAGGCGATCAAGGACAAGCTGGAGCAGGGGAAAAGAAAAGGGGC
GAAGGGCGCAGAGCAAGCGTACTTCGCCGACGGTGAGGGCCGCAGGGAGC
GGTACTCAAGTAGGAGTCAGGGGCAAGGTTGTGGTCGTGGCGGCGGCCGT
GGCCGCAGCAGCAGTCGTGGCCGCGGCGGAGGCGGTCGCGGCGGGGGCGG
CGGCGGTCGCGGCGGCCGCTCAGGCGGATGCGGAGGAGTCGAGGAGAGCG
AGGGAAGCAGCAGTGGAGGCGCCGATGGCGGCGGTGGCGAGGACTGTAAG
TTCCCGGGCCGGTGCTTTAGGTGTGGACATCGTGGACATCAAGCGATCGG
CTGCACTACCAACGATAAGGACGTCGTGCCTTGGTGTGCGCGCCGTGAGG
GGTGGGGCCACACCAAAGAAAGTGCGCGACGGAGGAGGCCGTCCTAGCGC
AAGTGGTGGAGCATGAGAGCGACGTGGACTCCGTGGAATCCCAGGCGTTT
TGTGCCGTGGCAGTCCCCCCACGCGAGTGTGGTACCGTTGGTGAAGTAGG
TCTAGTGGGGGTTGTAGAACAAGGCCAGGCGATGAACGTGGCCGACACAG
CGGCCACGTGCTCCATGTTCCGANGGGGAGGTGTGGTTCCCCCGGACTGG
AAAGCTGCTGACCCAACGAGGCTATCAAATAAAGCCAACGCTACACACCG
CCTGTGCCGAACTCATTGTTCCTGGCGATGCGAAAGCAGCCACCCCCACT
TACCTCAACCAGTACCACCTCGCGCACGGCCATGCCCACAAGACAATGCT
CAGGATCACGGCGGAGCAGCAGGGAGTGCAGCTGACGGATGGACCGCTGC
TACCCTGTCTTGGCTGTTCGATGTCCAAGGGACAGGTGAAACCTGTTCAG
AAGAGCACGAGCACACGCGCACTGCTACCTCTCGCAGATGACGAAGAGGG
CGGTGGGGGGGAGAGCAGAGCGGATGCATCACGCCAAGGTTGGGGGGGGG
AGAGAGACATAGAGAATGAGTCCGACCTCGACGTGATGGAGGCTCGTGGG
CCAGGGCAAGGTACGCCGTTTGTGCGCGAGGAGGCGCCGACGGCACCCGG
CAACGGGATTCCGGGGGACGGAGGCAGCGTTCCCCCGTCGCCCCCTTCGG
GAAGGGGCGACTTCGGCGAAGGCAGTAACAGTCCC back to topprotein sequence of EsuBft2609_2a-0001 >EsuBft2609_2 ID=EsuBft2609_2|Name=EsuBft2609_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=177bp
MSGRKDGGDSSSQSAAEDRKRSREELLALRTRDRSLRDQMSQVMSLVEDT
MKARKKEEPAGTIEGAADRGDARESAAAESTNAEGGAPWTGSAQDGRYLR
EAVGESGPSGRHSSEVGGFVPQEVRVAAAHNQDYCSAMGDDGAAVGLGYG
TTTPAMGYQSVRYTSPPFSGKSKYFNE back to topmRNA from alignment at Scaffold_373:57317..60889- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2609_2a-0001 ID=EsuBft2609_2a-0001|Name=EsuBft2609_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3573bp|location=Sequence derived from alignment at Scaffold_373:57317..60889- (Ectocarpus subulatus male Bft15b)
ATGTCAGGTCGCAAAGATGGGGGTGACTCTTCCAGCCAGTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCCTGGCCCTGAGGACGCGAGATA
GATCACTGAGGGATCAGATGAGCCAGGTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGGAAGAAGGAGGAGCCAGCTGGCACCATCGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGTGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAAGCTGTTGGAGAGTCTGGCCCGTCAGGGCGACACAGCAGCGAAGTAGG
GGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGCTCACAACCAAGATT
ATTGTAGTGCCATGGGAGATGACGGTGCTGCTGTTGGCTTAGGATACGGA
ACCACAACCCCAGCGATGGGTTACCAAAGTGTGAGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAATATTTCAACGAATAGCTAAATGATTTCCGCA
TGGCAGCTAATGGTGCGAACCTGTTGGAACACTTTGAAGAGAGCGGGAGC
TTTGAGATCCCCGTCAACAGCGGAAAGAGCAAGTTTTTGCTGTCACAGCA
GTACCGGAGCGAGCAAGTAGAGCTCGCATTCCACACGTGGAACGATCTGT
CTCACGCGTTGAAAGAAAAAGATCGGAAAATCATGAAGAGGGCAGAGACG
CCCTAGGGAGCTCTTCGTGAGCTCAAGACCATACACGACCCTGAATCATC
TGTACAGCCGTCAGAGGACCCCAAGTCCCTGACATCGACCAAGATCTCTA
GAGGTGAAAACCACCAAAACGCCCTAGATGAGATGCTCCAAACCTCAAAG
TCCTTAACCGAGGAAGGACTAACTGTCAACGAAACGTTCGTCCTTCACCT
CTTCTTGGATGCCCTTTCGGACGAGTATGCCATGACAAAGCACAACCTGC
CACACGCGAAGGAGTTGACGCGGACAGGTGTGCTAAAGGAAGAAATGATC
GAATACAAGGCGATCAAGGACAAGCTGGAGCAGGGGAAAAGAAAAGGGGC
GAAGGGCGCAGAGCAAGCGTACTTCGCCGACGGTGAGGGCCGCAGGGAGC
GGTACTCAAGTAGGAGTCAGGGGCAAGGTTGTGGTCGTGGCGGCGGCCGT
GGCCGCAGCAGCAGTCGTGGCCGCGGCGGAGGCGGTCGCGGCGGGGGCGG
CGGCGGTCGCGGCGGCCGCTCAGGCGGATGCGGAGGAGTCGAGGAGAGCG
AGGGAAGCAGCAGTGGAGGCGCCGATGGCGGCGGTGGCGAGGACTGTAAG
TTCCCGGGCCGGTGCTTTAGGTGTGGACATCGTGGACATCAAGCGATCGG
CTGCACTACCAACGATAAGGACGTCGTGCCTTGGTGTGCGCGCCGTGAGG
GGTGGGGCCACACCAAAGAAAGTGCGCGACGGAGGAGGCCGTCCTAGCGC
AAGTGGTGGAGCATGAGAGCGACGTGGACTCCGTGGAATCCCAGGCGTTT
TGTGCCGTGGCAGTCCCCCCACGCGAGTGTGGTACCGTTGGTGAAGTAGG
TCTAGTGGGGGTTGTAGAACAAGGCCAGGCGATGAACGTGGCCGACACAG
CGGCCACGTGCTCCATGTTCCGANGGGGAGGTGTGGTTCCCCCGGACTGG
AAAGCTGCTGACCCAACGAGGCTATCAAATAAAGCCAACGCTACACACCG
CCTGTGCCGAACTCATTGTTCCTGGCGATGCGAAAGCAGCCACCCCCACT
TACCTCAACCAGTACCACCTCGCGCACGGCCATGCCCACAAGACAATGCT
CAGGATCACGGCGGAGCAGCAGGGAGTGCAGCTGACGGATGGACCGCTGC
TACCCTGTCTTGGCTGTTCGATGTCCAAGGGACAGGTGAAACCTGTTCAG
AAGAGCACGAGCACACGCGCAGTTAAGAAGTTANNNNNNNNNNNNNNNNN
NNNNNNNNNNNGTGAGGTTCATATCGCACGTACCGACGGTGGCGGCGAGT
TCCAGGGGCAGTTTGCGGAAGTTTGCCGAAGACACGGCATCAAACAAGAG
TTCACCCCCCCTCACACCGCAGAATACAACGGTGTAGCGGAGAGAGCGCT
AGGATTGATCACTGATGCCGCGCTTTCGTCACGCATCCAAGGGACGCAAC
GGTTCCCCGACGCACCGAACCACCCCGGGTTGTGGGTCGAGCCCCATTTC
GTGTGCATGCCATCAGCTGAACTGCACCGCCACTAAATTAAACGAGAGAG
ACANGCAGCGGTTGGGTTTGAGAAGTTCTTGGCGGACTACCGAACGAAAG
GGGCTTCGTGCGAGGTTTATATCGCACGTACCGACGGTGGCGGCGAGTTC
CAGGGGCAGTTTGCGGAAGTTTGCCGAAGACACGGCATCAAACAAGAGTT
CACCCCCCCTCACACCGCAGAATACAACGGTGTAGCGGAGAGAGCGCTAG
GATTGATCACTGATGCCGCGCTTTCGTCACGCATCCAAGGGACGCAACGG
TTCCCCGACGCACCGAACCACCCCGGGTTGTGGGTCGAGCCCCATTTCGT
GTGCATGCCATCAGCTGAACTGCACCGCCACTAAATTAAACGAGAGAGAC
AAATCCGCCTACGAGATGTTCCACGACTCCACCGCCTGTTGGGTCTACAT
ACCCGTTTCTCAAACCAGCCGTGTTCGAGTCGAGAAGAAAAGCAAAGTCG
CAACCCAAGGGTAAAAAAGGATGGTACCTTGGTCCTGTCCACAATCACCC
CTGTGACTGCGTTCGCATGCTAACCGAAGCTGGAACCCTAATCACCACCC
GCATTTCCACCTGGCGCCACGTGCCCGCTGCATCGCCCGCTCCCCCGCAG
CTGCTACCTCTCGCAGATGACGAAGAGGGCGGTGGGGGGGAGAGCAGAGC
GGATGCATCACGCCAAGGTTGGGGGGGGGAGAGAGACATAGAGAATGAGT
CCGACCTCGACGTGATGGAGGCTCGTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNAAGGATGGTACCTTGGTCCTGCCCA
CAATCACCCCCGTGACTGCGTTCGCATGCTAACCGAAGCTGGAACCCTAA
TCACCACCCGCATTTCCACCTGGCGCCACGTGCCCGCTGCATCGCCCGCT
CCCCCGCAGCTGCTACCTCTCGCAGATGACGAAGAGGGCGGTGGGGGGGA
GAGCAGAGCGGATGCATCACGCCAAGGTTGGGGGGGGGAGAGAGACATAG
AGAATGAGTCCGACCTCGACGTGATGGAGGCTCGTGGGCCAGGGCAAGGT
ACGCCGTTTGTGCGCGAGGAGGCGCCGACGGCACCCGGCAACGGGATTCC
GGGGGACGGAGGCAGCGTTCCCCCGTCGCCCCCTTCGGGAAGGGGCGACT
TCGGCGAAGGCAGTAACAGTCCC back to topCoding sequence (CDS) from alignment at Scaffold_373:57317..60889- >EsuBft2609_2a-0001 ID=EsuBft2609_2a-0001|Name=EsuBft2609_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=534bp|location=Sequence derived from alignment at Scaffold_373:57317..60889- (Ectocarpus subulatus male Bft15b)
ATGTCAGGTCGCAAAGATGGGGGTGACTCTTCCAGCCAGTCTGCGGCGGA
AGACAGAAAGAGGTCAAGAGAAGAGCTCCTGGCCCTGAGGACGCGAGATA
GATCACTGAGGGATCAGATGAGCCAGGTAATGTCGCTAGTGGAAGATACC
ATGAAGGCAAGGAAGAAGGAGGAGCCAGCTGGCACCATCGAGGGTGCCGC
TGATCGCGGCGATGCTAGGGAGAGTGCCGCCGCGGAGTCCACGAACGCCG
AAGGAGGGGCACCGTGGACCGGGAGTGCGCAGGACGGGAGGTACCTGCGC
GAAGCTGTTGGAGAGTCTGGCCCGTCAGGGCGACACAGCAGCGAAGTAGG
GGGCTTTGTCCCCCAAGAGGTGAGAGTAGCCGCTGCTCACAACCAAGATT
ATTGTAGTGCCATGGGAGATGACGGTGCTGCTGTTGGCTTAGGATACGGA
ACCACAACCCCAGCGATGGGTTACCAAAGTGTGAGGTACACTTCTCCTCC
GTTCAGCGGGAAATCGAAATATTTCAACGAATAG back to top
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