EsuBft2554_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft2554_3a-0001
Unique NameEsuBft2554_3a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_389contigScaffold_389:536067..543846 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LGP4
ProteomeIdEsuBft2554_3
Protein domainsPTHR31836
Protein domainsIPR009009
Protein domainsIPR013994
Protein domainsIPR002889
Protein domainsIPR014733
Ownerapollo_admin@sb-roscoff.fr
Notewsc domain-containing protein 2 os:danio rerio gn:wscd2 pe:3 sv:1 [Automatic annotation]
Nb exon10
Max annot lvl2759|Eukaryota
Length3371
Hectar predicted targeting categoryother localisation
Evalue7.28e-280
EggNOG OGsKOG4157@1|root,KOG4157@2759|Eukaryota
Ec32 ortholog descriptionCarbohydrate-binding WSC
Ec32 orthologEc-10_003000.1
Date last modified2016-06-13
Date creation2016-06-13
KEGG koko:K01315
KEGG Pathwayko04080,ko04610,ko05150,ko05164,map04080,map04610,map05150,map05164
EC3.4.21.7
Descriptionprotein xylosyltransferase activity
COG categoryU
BRITEko00000,ko00001,ko01000,ko01002,ko04147,ko04516
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3aEsuBft2554_3aEctocarpus subulatus male Bft15bgeneScaffold_389 536067..543846 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3a-0001-exonagat-exon-49877Ectocarpus subulatus male Bft15bexonScaffold_389 536067..536271 +
EsuBft2554_3a-0001-exonagat-exon-49874Ectocarpus subulatus male Bft15bexonScaffold_389 536980..537068 +
EsuBft2554_3a-0001-exonagat-exon-49878Ectocarpus subulatus male Bft15bexonScaffold_389 538725..538868 +
EsuBft2554_3a-0001-exonEsuBft2554_3a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_389 539109..539252 +
EsuBft2554_3a-0001-exonagat-exon-49879Ectocarpus subulatus male Bft15bexonScaffold_389 539592..539904 +
EsuBft2554_3a-0001-exonagat-exon-49875Ectocarpus subulatus male Bft15bexonScaffold_389 540210..540274 +
EsuBft2554_3a-0001-exonagat-exon-49872Ectocarpus subulatus male Bft15bexonScaffold_389 540462..540500 +
EsuBft2554_3a-0001-exonagat-exon-49870Ectocarpus subulatus male Bft15bexonScaffold_389 540970..541141 +
EsuBft2554_3a-0001-exonagat-exon-49871Ectocarpus subulatus male Bft15bexonScaffold_389 541290..541413 +
EsuBft2554_3a-0001-exonagat-exon-49873Ectocarpus subulatus male Bft15bexonScaffold_389 541691..542777 +
EsuBft2554_3a-0001-exonagat-exon-49876Ectocarpus subulatus male Bft15bexonScaffold_389 542858..543846 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3a-0001-exonagat-five_prime_utr-6599Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_389 536067..536090 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3a-0001-cdsEsuBft2554_3a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_389 536091..536271 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3a-0001-exonagat-three_prime_utr-10314Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_389 542013..542777 +
EsuBft2554_3a-0001-exonagat-three_prime_utr-10315Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_389 542858..543846 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft2554_3a-0001EsuBft2554_3Ectocarpus subulatus male Bft15bpolypeptideScaffold_389 536091..542012 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft2554_3a-0001 ID=EsuBft2554_3a-0001|Name=EsuBft2554_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3371bp|location=Sequence derived from alignment at Scaffold_389:536067..543846+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TTGTTCTGGCAACGGATCTTTGCAATGTTCACACACGCCGCCACAGACCC
GTTGGATCGATGGTTTCGCTTCGCGAAGCTTAACGGATCTCGGGAAGCAC
AAGCCACCCCCACCACAACACCAGCTTCCACACACTCCTCCGCCCTCCTT
CCTCACTCCCTCGCTCTGCCGCCAGTAGCTAGCACCGGGTGTGTACCAAC
AGCAGCTACCAGCATCATGACGAGACTTGCGGCAGCTCTACTGGTGTGTG
CCACGCCCGTGGCTTCTCTGGAGACCTCTCTCAGGGGCGCAGAGGTTGCA
GCGGCAGCGGGAGGGGCTCGTCGCGGGCTCTCGGGAAGTAGTTACGAGTC
CTACGAGCACCTCGGCTGCTACGTCGACAACGGCATGGTAAACTCAAGCC
CTCACCTGCCGCTCGTGCTGGATGCGATGACGAACGAGTTGTGCTACGAC
CGTTGCCATGAGCTCGGCGCGTTCTTCATGGGGACCCAAAAGGGCAATGA
GTGCCGGTGTTCTCGCGAGGAGGACCTGGACTACTTTTCATTCGAGTCCG
GAGTCTGCGACGAACCTTGCGCCGGCGACTCGACCGAGACCTGTGGCGGC
GATCTCACTCTCGACTTGTACAAGCTGACGCCGGCGGACGAACCGGACCA
CGAGGAGTATGAGGGCTGCTGGTCGGACTTAGGCGAGAGCCGTGTGATGC
AGGACATGCTCGTCGACGAGAGCATGACGACCGATATGTGCCGCGATCAC
TGCGAGTCGTCGGACGCTGTGTACTACGCCACCCAGTACGGGAACGAGTG
CTTCTGTGGGTACTCTAGCGACCCGGAGGACTACGAGACCCACGGGCCGG
GCACCTGCCACATGCACTGCGCGGGGGATTCGGGGAGTGCTTGCGGTGGC
TACTGGGCGTTCTCTCTCTTCAAGTTCGGGGCCGACGGTATGCCAGATCC
CGCGGTGCCGGATGTGTCCGAGCCGCCCTCGGAGCCCGCCCCAGAGCCGG
TTGTCTCAACCCCGGCGCCCTCCATGTCGGAGGCTGAGTCGAAGACCCCT
ATCTCCGGCGGAGTATACGGAACCACCTTCGAAGGCGACGGGACCTACTA
CACCGGGATCTCGGCAGGCAACTGCGGGTTCTTCGATGACTTCCCGAGCA
TCTACAGCGGCATGACCCCAGTGGCGCTCAACGCGGCGCAGTACGGCGAC
TCGCTCATGTGCGGCTCGTGTGTGGAGGGTGAGGGCACCGGAGGAGGAGG
TGGTGACAACCCGATTGGCACCTTCAAGGGCTTCATCATGGACAAGTGCC
CGGAGTGCCACGAGGGAGACCTGGACTTCGGGACCGGGCTGGACGGCCGC
TGGGACATCGAGTGGCGGTTCGTGGCCTGCCCCGGGGAGGAGGTCTCCTT
CAAGGTCGTGGAGATGACCCCGTACTACTGGAAGATCCAGCCCCGCGGCA
CCGCAACCCCGGTCGAGTCGCTCACCATCGGCGGCAGGGCGGCGGCGAGG
ACCGACGACAACCACTTCGAGCTGGAGCACCCGAGCGGTAACCCGTGGTA
CGAACCGCAGATGGTGGTGACCACCACCGTGGGAGGCGTCGTCGAGGAGA
CGGAGATGTCTGTCTAAGGGGAGGAGGGGAGGAGCGTGTTCTCTGGTAAG
AAGCGCCGCCTCCCTTCTCCTTGTAGTAGTGGCTGGCTGGCACAACGAAG
CTCAGTCCCCCACGTCTTTCACACCGTGCCGGCCAAACCCCATAACTATG
GCTTCGTGCTGAGTTTTTTCAGCGGTGGACGGAAGCATTTTTTAACATTC
GACCCAAACGAATCCGGCTTGGCTGTTGATCATGCCTTGCAACGACGGGC
TGATGATGCACAGATGGGAAGGGCTGTGAAACGGACGCCGTGTATCGGCA
GCGGTGGGGCAGAGCGGGTTGCTTGCACGGTACACGTCGTAGGAAATAGC
ACCATCGCTGTACTTGAGAAAGTGTTTACAGTGTCTGTTGGTGTGTTGTT
CCTTCCTGAGGGCGGGATTAATGGGATACGTGTATCTTACGACATTGAGA
TGTACTTTTTAACAATTTTTGGAGTATAGGAAAGGGAGGGGTCAGAAGGC
CCTTTGATGGTCGTGCACGCAGGCATGGATCAAATGAGTTGTGAACGTCG
ATCAGGTGCAATGTTTCTAGTTATAATCAGGTTTGTTGGGTCTTTCCTGT
CGGCGATGCAGCACGATGCGGTAAGTTTTTGCACCGCGTTTTCCCAAACC
TGTAGCGTTGAGGGCATAACAGGTTCTTGTGCGTTGTTTAAATTTCTGCT
GGTTTCATCTGCTCGACCTGGCGGCGGAAAATGAGATGAGAGACGCGGCA
GGGGATGGGTTGAAACGAATTTCAGAGAGCTTNTTGTGGGCGATAGGGAG
TCTGTAGATTGGCTTGAGTTTTTGAAGGACAAGGATCACACGTGCATGCG
TTGTTTGTGGACAAGTATACAAACTCGAAGTAAGATTTTGCTGACGTCGT
CCGTCGGGTGGAGCGGAATGCGTCGCGACTTCCCGAACGACGTGATATAT
ATATGGATGTTTTTTGAATGTTTCCAGTGACGACGGGTTATAGAGCTAGT
TAGGGTAGGTGATGACGTGTAACCAGTCAAATTGTCATGCATACGAAAAT
GGTTTGTTGCTTGGTGCGGTGTGAGATGATCGATGCGGCCTGTGGTTGAT
TGCATGGGGTGCTCGTGTGTATCTTGATGGTGAAAATTTTTCGCTGTTGG
TGCTGGGGCTGGCTGCTTGGAACTGGTTCGTGCTCAAAAGAGCATGAAGA
TGGGAGACGCGGATGGATTCAGTTGCAGTTGCGCTCGTGCTGCCACGGAC
CCATGTCTTGTGATGGCCGACCTGTTTTTGATGGTATATCTTTGTTTTTG
TGTCCTTGCAGTATGCGTTTTTGTCTACTCTCGCGCTTACGCTCTTTTCA
ACGACTCGTGCGTGGCTTACGTCGTATGTATCTCGTGCTTTTTCACTGGT
CCGTTATGCTGTTGCAAAAAGCAAATTTCTTCTGTTGGTCGCGGGTGGAC
GCTACTTGGTTTATGCTTGTTGGTTGTTCTGTCTCGTCATTGCCCACTCT
CTTGTCGTTGATCGCGTGCCGCTCTCGTGGCTCTTTTATCGCTTACTTGA
ATTCAAATATTTTGTTGAGTGGCCCGGATAGGGGCGTTGTTTGTTTCGCT
AAACGCTGTGTAAAGGTGTTTTGTGGTAATATAGTGGGTGGGGGGTGATG
TTCTCAGACAAGGCTGTCCGTCCGACTGTCTTTTCCACAGTCAGTATCTC
ACCAGCCAGCAGCTGAATTCCACCATCTCGTCACCAAATTAACCCAAGAA
CAAGCAAGACTTGCTCGACCT
back to top

protein sequence of EsuBft2554_3a-0001

>EsuBft2554_3 ID=EsuBft2554_3|Name=EsuBft2554_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=530bp
MFTHAATDPLDRWFRFAKLNGSREAQATPTTTPASTHSSALLPHSLALPP
VASTGCVPTAATSIMTRLAAALLVCATPVASLETSLRGAEVAAAAGGARR
GLSGSSYESYEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAF
FMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYK
LTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVY
YATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFK
FGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTPISGGVYGT
TFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCV
EGEGTGGGGGDNPIGTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFV
ACPGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFEL
EHPSGNPWYEPQMVVTTTVGGVVEETEMSV
back to top

mRNA from alignment at Scaffold_389:536067..543846+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft2554_3a-0001 ID=EsuBft2554_3a-0001|Name=EsuBft2554_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=7780bp|location=Sequence derived from alignment at Scaffold_389:536067..543846+ (Ectocarpus subulatus male Bft15b)
TTGTTCTGGCAACGGATCTTTGCAATGTTCACACACGCCGCCACAGACCC GTTGGATCGATGGTTTCGCTTCGCGAAGCTTAACGGATCTCGGGAAGCAC AAGCCACCCCCACCACAACACCAGCTTCCACACACTCCTCCGCCCTCCTT CCTCACTCCCTCGCTCTGCCGCCAGTAGCTAGCACCGGGTGTGTACCAAC AGCAGGTGAGAGACCTTGTGCTAATGCGTGAACTGATTTGTCGCGCCGTC TGAAGCAACGATTCGGTGGGCTATTGCCGCTCACCGTGCGATTCATCGCG AGAGGCCAAAGCTTTCCCTGGCTGGAAGGGTGTGCAGCAGCTAAACACTG CTGTAGCTCAGCTGCCGGACTCTCGAGAGGTCACGAGAAGAGTAGGGAGT GTGCTCTGCTGCCTGGCCACCGAAGCGCGGGCGTGCCTGTGGCTTTAGCC AGTAGTGCGGGGGGAATGCACAGCTGATAGCTGTTGATTCATCACGGCCA CGCCAACGTGTGCCTGTTTTCCGGCTGATCTGGTTATCTCTCGATGTTGC GTGCACCCAACACCAGCAGCAGTTGTACAGGACGGCAGCCGCAGGCGAGA CCCCTGTCACCGCTGTCGAACAAACTGCTAGGGTTTTGCTCGGATACTAC AACGCACACGCGTTGTCATTCTCGGCAACAGACAAGTGGTGCAACGACGA GACTCGCACGACTGCTGTCGCTCTGTCCGATATGTGCTACCTTGGTTGTG TTTGGTGGTCGAAAGTCTCGGCGGTACTGTTGTGGTTTGCATGCCATTCC CGCTCTCTTCATAACATGTAATCTGCTTGTGCAACTGCTGTTGCTGATGC TTCTGCTACATTTGTACCACCACAATGCTTCTCGCTCCTTTTTCCGCCCC CCCCAGATGGCAGCTACCAGCATCATGACGAGACTTGCGGCAGCTCTACT GGTGTGTGCCACGCCCGTGGCTTCTCTGGAGACCTCTCTCAGGGGCGCAG AGGTGAGCGTTTTTCAGGAAATGTAAATGTTGATGCGCATTATTTCTCGG CGTTGTCTTTTTTCAGAAAACTGCTTGCTTTCCCAATGGGCTCTCTCTCG ATTGTGTTGTTCCAACACCCCTACTGGCGGTAGTGGTGCAGCAGGTATGG AGGACGAGGAGTATCCTTTCCGCCAAAATGCACCAGCCCCGGACGCGTCA CACACGCTTGGCCTCCAAAGTGTCACCGTCGACTTTGGTCTCAAGATGCT CCCAACGGACTACTCAACGTGAAATTGTTTCTCGATGCAACCGCCATATC GCCCTGGAAAAAAACAACGAACCATACACACCACGCACGGGGGCAAATGA TCAACGAGAGAGAGGACTTGTGTGGAAACTTTGTTGCATATTCTAACAAC GCATGATGTCACGTTCACTTCTTAATGTAATGGAGACACACTCCTGCTTG TACTGCTGTGTATCGCCGTGCAACATGTAATAGCACGGAATTCGTTGGTT CTCCCGTGATCCAGCCCTCTTCCTCTCAGCCTTTTTTTTCTCTGTGTAAG GCACCCCGACTGTCTTCGTCGTAACGCCGGAGACGGCGCGACGGTCCTGC GCAATCGACGCGTCAAATAACATGGTCGCAGCGTAGTCGCAACTGTGGGC ACCGGTGACACCGCCGCCCGAAAGCAGTGACCGCGTTCGTCTGTTGGTGA TGGCTTTCAGAGGAAAAAATCTACGTAAATGCGTCCATTGAGCGACTTGG CGGCACCTCAACAGCGTCACACGCGATCCCAACAGAAATATCAGTAGTTA CCCCAGTTCACCAGAAATTGTTTGCGTTCCATTTTCTGTCTATAGCTATC AAGCTGGAGTTTGCAAATGGGTATGTAGTTGGACGTGGCGGCGATGAACC GTCATTTTTGATGGATCGTTTCACATGTGTCGTCCGTTTTGCCGCCTGCC CGCTCCCGACGCCCGAGCAGAGCACATGCATGCGTGCGAAAAGCGTTCAG ACGCTGCTCGCTATCGTTGTTGGTTGCTGTCTGCACATCATAAACCGTTC GGATCTCTCTCTACCCAGTACCTTCCTTCATATGATGGTACTGATGCAAC ACTTCACGCGGTCGATTCCCGTCGTCGCAGGCTAACTCACCCTTGAAAGT TACACTCGAATAAACTGGTCCAGAGGGGTCCGCGGACCAGTAGAGATCAA CGACAGATATTCTGGAGTTCTCCACTCCTTCTGCCCGCAATGCTAGGTAA CAACTGAGACTAGTAGTCAGCATAACGGGCCAGGGAAAATGAGGGACACT CCCTTGGTTAAATCTTGGTGGTTCACAAGGCAGAGACATGCCATCTGACG CAGAAAAAAATTAGGATGGAAGGTGAAGTGAGAAAATAGAAGAAACGGGG AGGAAAGGGAAACGAAAATGGAAAAGAGCCACGGACCAACAACAATCAGA ACAGGAAATGACGAAACAAGGGATGGAACCGCCATGTCTTATTTCGAAAA TTAAAATTGTAAATATAAATATTATTTTGAAGGGAAGATACAAATATGGA GCGTTGGAGGTGTGATATCAACAACATGCTCGGAATGTCAACGGAATGTC AACAGCACCCAGCTCACATGATCGACGTGCTTGCTGTGTATCACCACCGC CGCCTCAGGTTGCAGCGGCAGCGGGAGGGGCTCGTCGCGGGCTCTCGGGA AGTAGTTACGAGTCCTACGAGCACCTCGGCTGCTACGTCGACAACGGCAT GGTAAACTCAAGCCCTCACCTGCCGCTCGTGCTGGATGCGATGACGAACG AGGTGACAAGGCTATCACGAATGTGCCATGAACCATTTGCGTACATGTAG TCATGTACGCTTCTTGAGAAAACTCCTTTTCCATGAATCGATCGGCCTAC AGCGGTAGCCTGCGTCCTACATGCCGGTTTTCCACAATGTCACGTTTCAT CAGTGTGGTGTAGACCTTGTTGCTGACTCTCGCCGCCACGTGCTACATGT ACTCATTGAATATGAACGAAACTCTTTCGTCACTCGCAACAGTTGTGCTA CGACCGTTGCCATGAGCTCGGCGCGTTCTTCATGGGGACCCAAAAGGGCA ATGAGTGCCGGTGTTCTCGCGAGGAGGACCTGGACTACTTTTCATTCGAG TCCGGAGTCTGCGACGAACCTTGCGCCGGCGACTCGGTGAGTTGGAAAAA ACTCTGTTCGTACGTGCTCAACATGTACTAGTGTTGGATGCGGCGTGGAA GGTCTTTGCTTCTGCTTTTGCTGCCGTTGAGGAAGCAATCCGTCGACACG TTCTGGAAAACACACCCGTCGTACGCTATGTGTGACAAGCCAAGGTTGTT ACACGTGTCCTCACCCTTGCGGGTGTGATTTCTCGCGCCTCTGGCGTTCG GCTAGAAAAAGTGCGAGCGTCGGAGCGAACGGCATCAGAGGGGTAGATGT TCCTTTCACGGTTCTGTGTGAAAGGCGTTCGGTGACGGTTACGGCTTACC TCAACCCTCACCCCTCTCGCCCCAGACCGAGACCTGTGGCGGCGATCTCA CTCTCGACTTGTACAAGCTGACGCCGGCGGACGAACCGGACCACGAGGAG TATGAGGGCTGCTGGTCGGACTTAGGCGAGAGCCGTGTGATGCAGGACAT GCTCGTCGACGAGAGCATGACGACCGATATGTGCCGCGATCACTGCGAGT CGTCGGACGCTGTGTACTACGCCACCCAGTACGGGAACGAGTGCTTCTGT GGGTACTCTAGCGACCCGGAGGACTACGAGACCCACGGGCCGGGCACCTG CCACATGCACTGCGCGGGGGATTCGGGGAGTGCTTGCGGTGAGTTGTTGA GAAGAACAGGACAAGAGTGTGTTGGTGATGGTATCGGTTGTGCACATCCA AAGTGTCTTCTTCATTTTTACCCCAAAACGCGACGCTCAAGCGCCTGATT CCCCCCCCCCCCCGACGGAGAGAGAAAAGAAGCCAATTCGGAGTTCCTTT CACCGCCGACCGAGAGACAAAGCATAGAAGTCATGTCGGAGGAAAATTCT TTTTCCGGTGTCACAACCCTCCTTTCTTGTGATCATCCCTGCTTAGTTCC TCACCTCGACCCCGCCTACTCCGAAAAACAACGGCGGCACCAGGTGGCTA CTGGGCGTTCTCTCTCTTCAAGTTCGGGGCCGACGGTATGCCAGATCCCG CGGTGCCGGTGAGGACTTTTTTTCGTTTCCTATCGAGTTGTGAAGCTGAT TAACCCGAGCTTTGCCCAAAACCCCCATTTCGCTTCATCTAATTCCGTTG AAGGCCGATTCTGCTGCCCCTCGCCCACGATGTACAGCAGATTACATGAA GTTGAGCTCTTGCTTTGCGTTCTTCCTTCGTCTGTGATGATTCAGGATGT GTCCGAGCCGCCCTCGGAGCCCGCCCCAGAGCCGGTAAGCGCGATTTCCT ACGCAAGGAATGCCGTACTTTGAAGCGAACACGTTTATCGTCCTAATTTG GGGAACCTCAACTGCCGTTGATAGTTGTAGAACGCCCGGAGCACAGGTTG ATCGTTAATTTGATGAAAGATTATTAAGGGCCCATTTTCGCAAAGGCCTA CTACATGTTGTTGTGTTCCCAACTTGGCGAACCGCAACTACTGCCCAGGG TTACAGCTAGACTGTACTGCAACTTTTCTCATGCCGACCACACGCTTTGC TTGAAATATGGACGTCATGCAGGCGGTGGTAGTACACTAGAAACACTCGT CTCGTTGGGGGTGTACCGAATCAAGGGACGATGTCTATTTGAGCACGTCT TGTACACGCTTTAAGTTATGATGATGTACCCTCATATGACACCAAGGTCC GTCGATGGAACTATGCGCTGCGTCGGGTTGTATGTGTTGTGTGTTGCGCT TAGGTTGTCTCAACCCCGGCGCCCTCCATGTCGGAGGCTGAGTCGAAGAC CCCTATCTCCGGCGGAGTATACGGAACCACCTTCGAAGGCGACGGGACCT ACTACACCGGGATCTCGGCAGGCAACTGCGGGTTCTTCGATGACTTCCCG AGCATCTACAGCGGCATGACCCCAGGTTAGGATGAGGACACGGGTGATAA TTGACCTGAAGACTTGTTGATTTGGGAATGAAGTTGGTTCTGTTGTAGGA CCCCTCCTTTGAACTTTTTGCCATTCCGGTCCACCAACGTACACCCGCTG CTGGTGCTGTCTTGTGTGAAAAGTGGCGCTCAACGCGGCGCAGTACGGCG ACTCGCTCATGTGCGGCTCGTGTGTGGAGGGTGAGGGCACCGGAGGAGGA GGTGGTGACAACCCGATTGGCACCTTCAAGGGCTTCATCATGGACAAGTG AGAGCATGGGGAATGTGCTAAACAAAAGGCGCGCGTTCGGTTTCGTCGGG TTTTTTTTACATCCAGACCAGCCTGTGTCCAACCACAACTCCAAGGCTTG CCTTGCCCCCTCGCTACACACGCATACGCAGCGTTCCATGTTGTGGTTTA TAAAAAAATCAAGAAACTGTGGTGTTATTTCTGAAAACATCCCCCCACCT GGCTTCCTGCCACTCTCCTCTCTTGCTGCTGCACGAACCACCAACCGCGA CAAATAAATTGTGATGGGTCACAGGTGCCCGGAGTGCCACGAGGGAGACC TGGACTTCGGGACCGGGCTGGACGGCCGCTGGGACATCGAGTGGCGGTTC GTGGCCTGCCCCGGGGAGGAGGTCTCCTTCAAGGTCGTGGAGATGACCCC GTACTACTGGAAGATCCAGCCCCGCGGCACCGCAACCCCGGTCGAGTCGC TCACCATCGGCGGCAGGGCGGCGGCGAGGACCGACGACAACCACTTCGAG CTGGAGCACCCGAGCGGTAACCCGTGGTACGAACCGCAGATGGTGGTGAC CACCACCGTGGGAGGCGTCGTCGAGGAGACGGAGATGTCTGTCTAAGGGG AGGAGGGGAGGAGCGTGTTCTCTGGTAAGAAGCGCCGCCTCCCTTCTCCT TGTAGTAGTGGCTGGCTGGCACAACGAAGCTCAGTCCCCCACGTCTTTCA CACCGTGCCGGCCAAACCCCATAACTATGGCTTCGTGCTGAGTTTTTTCA GCGGTGGACGGAAGCATTTTTTAACATTCGACCCAAACGAATCCGGCTTG GCTGTTGATCATGCCTTGCAACGACGGGCTGATGATGCACAGATGGGAAG GGCTGTGAAACGGACGCCGTGTATCGGCAGCGGTGGGGCAGAGCGGGTTG CTTGCACGGTACACGTCGTAGGAAATAGCACCATCGCTGTACTTGAGAAA GTGTTTACAGTGTCTGTTGGTGTGTTGTTCCTTCCTGAGGGCGGGATTAA TGGGATACGTGTATCTTACGACATTGAGATGTACTTTTTAACAATTTTTG GAGTATAGGAAAGGGAGGGGTCAGAAGGCCCTTTGATGGTCGTGCACGCA GGCATGGATCAAATGAGTTGTGAACGTCGATCAGGTGCAATGTTTCTAGT TATAATCAGGTTTGTTGGGTCTTTCCTGTCGGCGATGCAGCACGATGCGG TAAGTTTTTGCACCGCGTTTTCCCAAACCTGTAGCGTTGAGGGCATAACA GGTTCTTGTGCGTTGTTTAAATTTCTGCTGGTTTCATCTGCTCGACCTGG CGGCGGAAAATGAGATGAGAGACGCGGCAGGGGATGGGTTGAAACGAATT TCAGAGAGCTTGTGGGCGTTAGGGAGTCTGTAGATTGGCTTGAGTTTTTG AAGGACAAGGATCACACGTGCATGCGTTGTTTGTGGACAAGNTTGTGGGC GATAGGGAGTCTGTAGATTGGCTTGAGTTTTTGAAGGACAAGGATCACAC GTGCATGCGTTGTTTGTGGACAAGTATACAAACTCGAAGTAAGATTTTGC TGACGTCGTCCGTCGGGTGGAGCGGAATGCGTCGCGACTTCCCGAACGAC GTGATATATATATGGATGTTTTTTGAATGTTTCCAGTGACGACGGGTTAT AGAGCTAGTTAGGGTAGGTGATGACGTGTAACCAGTCAAATTGTCATGCA TACGAAAATGGTTTGTTGCTTGGTGCGGTGTGAGATGATCGATGCGGCCT GTGGTTGATTGCATGGGGTGCTCGTGTGTATCTTGATGGTGAAAATTTTT CGCTGTTGGTGCTGGGGCTGGCTGCTTGGAACTGGTTCGTGCTCAAAAGA GCATGAAGATGGGAGACGCGGATGGATTCAGTTGCAGTTGCGCTCGTGCT GCCACGGACCCATGTCTTGTGATGGCCGACCTGTTTTTGATGGTATATCT TTGTTTTTGTGTCCTTGCAGTATGCGTTTTTGTCTACTCTCGCGCTTACG CTCTTTTCAACGACTCGTGCGTGGCTTACGTCGTATGTATCTCGTGCTTT TTCACTGGTCCGTTATGCTGTTGCAAAAAGCAAATTTCTTCTGTTGGTCG CGGGTGGACGCTACTTGGTTTATGCTTGTTGGTTGTTCTGTCTCGTCATT GCCCACTCTCTTGTCGTTGATCGCGTGCCGCTCTCGTGGCTCTTTTATCG CTTACTTGAATTCAAATATTTTGTTGAGTGGCCCGGATAGGGGCGTTGTT TGTTTCGCTAAACGCTGTGTAAAGGTGTTTTGTGGTAATATAGTGGGTGG GGGGTGATGTTCTCAGACAAGGCTGTCCGTCCGACTGTCTTTTCCACAGT CAGTATCTCACCAGCCAGCAGCTGAATTCCACCATCTCGTCACCAAATTA ACCCAAGAACAAGCAAGACTTGCTCGACCT
back to top

Coding sequence (CDS) from alignment at Scaffold_389:536067..543846+

>EsuBft2554_3a-0001 ID=EsuBft2554_3a-0001|Name=EsuBft2554_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1593bp|location=Sequence derived from alignment at Scaffold_389:536067..543846+ (Ectocarpus subulatus male Bft15b)
ATGTTCACACACGCCGCCACAGACCCGTTGGATCGATGGTTTCGCTTCGC
GAAGCTTAACGGATCTCGGGAAGCACAAGCCACCCCCACCACAACACCAG
CTTCCACACACTCCTCCGCCCTCCTTCCTCACTCCCTCGCTCTGCCGCCA
GTAGCTAGCACCGGGTGTGTACCAACAGCAGCTACCAGCATCATGACGAG
ACTTGCGGCAGCTCTACTGGTGTGTGCCACGCCCGTGGCTTCTCTGGAGA
CCTCTCTCAGGGGCGCAGAGGTTGCAGCGGCAGCGGGAGGGGCTCGTCGC
GGGCTCTCGGGAAGTAGTTACGAGTCCTACGAGCACCTCGGCTGCTACGT
CGACAACGGCATGGTAAACTCAAGCCCTCACCTGCCGCTCGTGCTGGATG
CGATGACGAACGAGTTGTGCTACGACCGTTGCCATGAGCTCGGCGCGTTC
TTCATGGGGACCCAAAAGGGCAATGAGTGCCGGTGTTCTCGCGAGGAGGA
CCTGGACTACTTTTCATTCGAGTCCGGAGTCTGCGACGAACCTTGCGCCG
GCGACTCGACCGAGACCTGTGGCGGCGATCTCACTCTCGACTTGTACAAG
CTGACGCCGGCGGACGAACCGGACCACGAGGAGTATGAGGGCTGCTGGTC
GGACTTAGGCGAGAGCCGTGTGATGCAGGACATGCTCGTCGACGAGAGCA
TGACGACCGATATGTGCCGCGATCACTGCGAGTCGTCGGACGCTGTGTAC
TACGCCACCCAGTACGGGAACGAGTGCTTCTGTGGGTACTCTAGCGACCC
GGAGGACTACGAGACCCACGGGCCGGGCACCTGCCACATGCACTGCGCGG
GGGATTCGGGGAGTGCTTGCGGTGGCTACTGGGCGTTCTCTCTCTTCAAG
TTCGGGGCCGACGGTATGCCAGATCCCGCGGTGCCGGATGTGTCCGAGCC
GCCCTCGGAGCCCGCCCCAGAGCCGGTTGTCTCAACCCCGGCGCCCTCCA
TGTCGGAGGCTGAGTCGAAGACCCCTATCTCCGGCGGAGTATACGGAACC
ACCTTCGAAGGCGACGGGACCTACTACACCGGGATCTCGGCAGGCAACTG
CGGGTTCTTCGATGACTTCCCGAGCATCTACAGCGGCATGACCCCAGTGG
CGCTCAACGCGGCGCAGTACGGCGACTCGCTCATGTGCGGCTCGTGTGTG
GAGGGTGAGGGCACCGGAGGAGGAGGTGGTGACAACCCGATTGGCACCTT
CAAGGGCTTCATCATGGACAAGTGCCCGGAGTGCCACGAGGGAGACCTGG
ACTTCGGGACCGGGCTGGACGGCCGCTGGGACATCGAGTGGCGGTTCGTG
GCCTGCCCCGGGGAGGAGGTCTCCTTCAAGGTCGTGGAGATGACCCCGTA
CTACTGGAAGATCCAGCCCCGCGGCACCGCAACCCCGGTCGAGTCGCTCA
CCATCGGCGGCAGGGCGGCGGCGAGGACCGACGACAACCACTTCGAGCTG
GAGCACCCGAGCGGTAACCCGTGGTACGAACCGCAGATGGTGGTGACCAC
CACCGTGGGAGGCGTCGTCGAGGAGACGGAGATGTCTGTCTAA
back to top