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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LJ79 |
| ProteomeId | EsuBft2510_2 |
| Protein domains | IPR025929 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | TMhelix |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | TRANSMEMBRANE |
| Protein domains | SIGNAL_PEPTIDE |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | insulin-induced gene 1 protein os:homo sapiens gn:insig1 pe:1 sv:3 [Automatic annotation] |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1552 |
| Hectar predicted targeting category | mitochondrion |
| Evalue | 2.92e-201 |
| EggNOG OGs | KOG4363@1|root,KOG4363@2759|Eukaryota |
| Ec32 ortholog description | Insulin-induced protein family |
| Ec32 ortholog | Ec-02_005080.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | INSIG1 |
| GOs | GO:0001101,GO:0001501,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006066,GO:0006355,GO:0006357,GO:0006629,GO:0006638,GO:0006639,GO:0006641,GO:0006694,GO:0006695,GO:0006950,GO:0006984,GO:0006991,GO:0007154,GO:0007165,GO:0007275,GO:0007423,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008283,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009887,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010565,GO:0010604,GO:0010628,GO:0010639,GO:0010646,GO:0010648,GO:0010894,GO:0012505,GO:0014070,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0019216,GO:0019217,GO:0019218,GO:0019219,GO:0019222,GO:0023051,GO:0023052,GO:0023057,GO:0030176,GO:0031224,GO:0031227,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031333,GO:0031984,GO:0032355,GO:0032386,GO:0032387,GO:0032501,GO:0032502,GO:0032507,GO:0032868,GO:0032869,GO:0032870,GO:0032879,GO:0032880,GO:0032933,GO:0032937,GO:0032991,GO:0033036,GO:0033043,GO:0033157,GO:0033365,GO:0033554,GO:0033993,GO:0034613,GO:0035437,GO:0036314,GO:0036315,GO:0036316,GO:0042175,GO:0042221,GO:0042304,GO:0042471,GO:0042472,GO:0042474,GO:0042592,GO:0042632,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043434,GO:0043583,GO:0044087,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045185,GO:0045595,GO:0045596,GO:0045598,GO:0045599,GO:0045717,GO:0045833,GO:0045893,GO:0045922,GO:0045935,GO:0045939,GO:0045944,GO:0046165,GO:0046486,GO:0046890,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048562,GO:0048568,GO:0048583,GO:0048585,GO:0048598,GO:0048705,GO:0048731,GO:0048839,GO:0048856,GO:0048878,GO:0050789,GO:0050793,GO:0050794,GO:0050810,GO:0050896,GO:0051049,GO:0051051,GO:0051055,GO:0051093,GO:0051128,GO:0051129,GO:0051171,GO:0051173,GO:0051179,GO:0051223,GO:0051224,GO:0051235,GO:0051252,GO:0051254,GO:0051641,GO:0051651,GO:0051716,GO:0055088,GO:0055092,GO:0060021,GO:0060255,GO:0060341,GO:0060348,GO:0060349,GO:0060363,GO:0060627,GO:0060628,GO:0062012,GO:0062014,GO:0065007,GO:0065008,GO:0070201,GO:0070542,GO:0070727,GO:0070861,GO:0070862,GO:0070887,GO:0070972,GO:0071310,GO:0071375,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071501,GO:0071704,GO:0072595,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090317,GO:0090596,GO:0097094,GO:0098796,GO:0098827,GO:1901301,GO:1901303,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902652,GO:1902653,GO:1902680,GO:1903506,GO:1903508,GO:1903827,GO:1903828,GO:1904888,GO:1904950,GO:2000112,GO:2000638,GO:2000639,GO:2001141 |
| Description | SREBP-SCAP complex retention in endoplasmic reticulum |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031326 |
| GO | 0051716 |
| GO | 0033993 |
| GO | 0042471 |
| GO | 0051055 |
| GO | 0005783 |
| GO | 0008203 |
| GO | 0048523 |
| GO | 0006991 |
| GO | 0016021 |
| GO | 0008152 |
| GO | 0043434 |
| GO | 0016126 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2510_2a-0001 ID=EsuBft2510_2a-0001|Name=EsuBft2510_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1552bp|location=Sequence derived from alignment at Scaffold_235:12129..16639- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCCCGCGATTCCCACTCTACAGGGGGGTGTCTACCACTGTTGCCATTCT GAGCTCCCCGTCCTTCTGTGTGGGGTGGCTCTGGATATCCCGAAATGCGC ATTTCCACCAAAAAGGCAGCACTTGCAGGCGCAGCGGCCGTCTTCTTGCA TCACTCACAATGTGTGGGGTACACATCATTCATGCGGCCGTTGCACCCCC GCCATTGTAGCGCAATCACTAGGGCAATGCCCTACCGACGCAGCGACCGA AATCATGTGCTGAAGCTTGCTGCTGGAGGAGGCCCGCCCCGTGCTGTCGG AGAGTCGACTCCTTTGTCTCGGGCGCGAGACGTGTTGTTTGAGCCGGCCT TTCGAAGTTTACTCCCGCCAATGGCCGCGGCAGGCGCGCTGCTCGGCCCC AACCTCGACAACTACCACAGCGCCTTCGGAGTGTTGGCGTACAAGCACCC CATCGAGCTGAACGTTGCCGGACGCTTGATCGTTACTACGGACTGGTGGG TGCCGCCTCTGTTCGCCGTTGCTGGAGCTGGGATCGGGGCGCTCTATATA CTTTTGGACGCGGCCTTGGAGACTCCGCAGGCGCAGCGGGAGCCGGTGTG GCGAGACGTTCTCCTGTCCATTTCTTTGTTCAGCTTCCAGTACTACCTGA GCGGACTGTTGACAGCCGTGGGGTGTCCGTACTGGGTGTTGGTGGGGTTG TTGGCGGTCATCGCCGAGCGTGTTTTTGATGTCTTCGACGCCACACGAGC GGGGCTGTGGGTCTCCCTGGCTACGGCGACGCTGGGTCCGTTAATCGAGA TTTTCCTGGTGAACGCAACGGATCTGTACGTGTACAACGGAGCCGACTTT TTCGGGGTGGACAGCTGGATTCCGATCGTCTACTTCTGCGGGGGTCCCGC CGTGGGAAACTTGGCCAGGACAATATACGCAAAACTCCTCGCGGTGGAAA GAAAGGAGGGGCGCAACCTGAGGTAGCTTGTTCTTAGGGCCAAACCTACT TGAATAAGAAACCGAGTTTATAGACGTTGTCGGGCTGGGCCTTCGGTGTT ACCAAAGCGGTTAGGTGGCATGGTTTCCATCCGGCAAAACACAGAGAAAC GTTCTTCTTGCATGGCCAGTTTTGTGTTGGTGCGACGCTCCATGTTCCTC CATAGAGCTCGTTCTGCACGCGCTACAATTGTGTCCCAGAGAGAGTACTT CAGTGGCCCGAATCAAGCCCTTTTCTGGCCCGCCCTCCTCTGTGCTTGAA ACTTCAAGATTTCGTTTTTGGTTGGCGAAGAGAAACAAAGAATGAACGGT TCGCATGAAGCTGTCGAAACATGGGTAGGTCCTCCCGAATTTGTCTGAAG AGCAAAAAATCGAGAATGGAAGACGGAGATTTGGTGAGAGCGGCATGTTC TTTGCACTTGAAACGAGTCGATGGGAGGACGCCGAAAAACAAGTGGCAGC ATTAAGATGCCTAGAAGTCGTGTTATGAACGCGGTCTTGAATGCCGGAAG GTAGACATAGTCGTGGACCCTAAAAAGCGCCGGTACGTGCCAGGCCACTC CA back to topprotein sequence of EsuBft2510_2a-0001 >EsuBft2510_2 ID=EsuBft2510_2|Name=EsuBft2510_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=293bp
MRISTKKAALAGAAAVFLHHSQCVGYTSFMRPLHPRHCSAITRAMPYRRS DRNHVLKLAAGGGPPRAVGESTPLSRARDVLFEPAFRSLLPPMAAAGALL GPNLDNYHSAFGVLAYKHPIELNVAGRLIVTTDWWVPPLFAVAGAGIGAL YILLDAALETPQAQREPVWRDVLLSISLFSFQYYLSGLLTAVGCPYWVLV GLLAVIAERVFDVFDATRAGLWVSLATATLGPLIEIFLVNATDLYVYNGA DFFGVDSWIPIVYFCGGPAVGNLARTIYAKLLAVERKEGRNLR back to topmRNA from alignment at Scaffold_235:12129..16639- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2510_2a-0001 ID=EsuBft2510_2a-0001|Name=EsuBft2510_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4511bp|location=Sequence derived from alignment at Scaffold_235:12129..16639- (Ectocarpus subulatus male Bft15b) CCCCCGCGATTCCCACTCTACAGGGGGGTGTCTACCACTGTTGCCATTCT
GAGCTCCCCGTCCTTCTGTGTGGGGTGGCTCTGGATATCCCGAAATGCGC
ATTTCCACCAAAAAGGCAGCACTTGCAGGCGCAGCGGCCGTCTTCTTGCA
TCACTCACAATGTGTGGGGTACACATCATTCATGCGGCCGTTGCACCCCC
GCCATTGTAGCGCAATCACTAGGGCAATGCCCTACCGACGCAGCGACCGA
AATCATGTGCTGAAGCTTGCTGCTGGAGGAGGCCCGCCCCGTGCTGTCGG
AGAGTCGACTCCTTTGTCTCGGGCGCGAGACGTGTTGTTTGAGCCGGCCT
TTCGAAGTTTACTCCCGCCAATGGCCGCGGCAGGCGCGCTGCTCGGCCCC
AACCTCGACAACTACCACAGCGCCTTCGGAGTGTTGGCGTACAAGCACCC
CATCGAGCTGAACGTTGCCGGACGCTTGATCGTTACTACGGACTGGTGGT
GAGAGACGTAATTTTTGACCAGCATCACAACGTGTACAGTAGATGCATCT
CAGCTGCGCTGCTTTTGTATTGGCATCTATGGCGCTGGTCTCTTGGGGTG
CGCTATGCAAGGGCGTAGATATATACTTCTAAGTATGTTGGCAGAGGAGA
TATGTATGACAGGTCAGGGTGCTGTGACCCTAATCCAGCTTGAACATGAA
CACAAGCCTGTACCCACTGTTCCCGAGTACATGCACGAGCTGGGGACTGC
CATTCAGCGCTTTGGCAGGCATCCAATAATGTAGTCGACGAAAATCCTTA
CCCTGTAACAATTTGGTTCACAGCTGTTCCTGTGCACGCTTTGTGGGCGT
TCTACTGCATGTTGCCGTGCGTTTCATGGTAGAAAAGCAAACCCAGCTGA
GCAGTTACCACCACCGTCTAGCCTTGTACTGGGTTCGGCCTTGCTGTGCT
TTGCACCCGCGGCCCCGTTAGTTTCGTCATCTTCGTTCTCTGCTGCCGTG
CTGCTATTTCAACGTAGGGTGCCGCCTCTGTTCGCCGTTGCTGGAGCTGG
GATCGGGGCGCTCTATATACTTTTGGACGCGGTAAGCGCGACAATCGCGC
GTATCTTTCCCTTGAAACCCCCCGAAACATGTTGGGCCATTTTCGCGCTC
TCACTTCCACCCACAGTTTGGATAAGGATGTTCCACTCTTCCAAAATGCG
CACGCAGCATCCATCGCCATGGCGCCCCTCTTTTTGCCAGTTTTCAGTTC
GATCTCCAACTGCAATTTCAAAGCTGTTTTTCGACCCCGATATATGAGCG
GAGTAGATTCCGGCAATACTTTCCAGACTTCTCGGAAGCAGCTTCGAGCC
TGTAACCATGTCCTTGTTGTTGGTGGTGGTGGTGGTGGTGGGCTGGTGGT
CTTTGATTGTCGTTTTGTTTCAAGATACTAGGAATTGAGGCACCACGCGC
GTCCAGTTATTTAGGCACACCCGATCAAAGGATTCCATTCCCTCAAGCTC
AAGCAAGCGTAGCAAAGACCACCTGACACACAGAGCGATTTTTTTTACTT
GCTGCAGGCAGTATACTTAGCTCTTCTTCGCTGTCTCTTCTTGTGGCCAA
TACAATCAAATATTTGCTCAAATACATACATATGCAAACACAGTTATGAA
GTTTCCACTGCTGTGTTCGATGTGCTTTATGTGTGTGACTATTCGCGCAC
TGGCCTGTCGCTTGCGTGTGTTCTCTCGATTGCTATTTTCGTCCATGCTT
CTCTCGCAGGCCTTGGAGACTCCGCAGGCGCAGCGGGAGCCGGTGTGGCG
AGACGTTCTCCTGTCCATTTCTTTGTTCAGCTTCCAGGTAAGGCAGCAAT
ACACGTGTCAACAACGACACGTCTCTTTTGTACGTTGGCGCAGATGCAAG
TTTTTACCCAGCAAGGTGTTCACGTCATTCTGCTTGTGAGCGAACTGAGC
AATATCTACGGCACGGACCGCCGATATACGTCTCACGGACATGGTCATGT
TTCTTGTCGGTATTTTTAGCTGAATTTGGGCAGTGCATATGTTTGCTCAC
GCCACGTGCAAAAACAGGTTTTAGTTCAACCCCCTGCTAAAAGGGATCTG
AGGGGGGCGGGTGCTAGTTGGTGGCACATGCCTACAGCTATGTACCCTCG
GACTCAATGGCAGCTAGTTTGCACTTTACTTGTCAACAAATCACTTGACC
ACGCAATTCGAGGCGATATTCCTGCTTCCAAAGGGGCCGACAATATTTGC
GACCGGTTCGGTGACCTTTTTCGGCATCTTCGGACAATGCCTCGGAGGTG
TCTCGGAAGAGAAACGGTTGGTCAATGCTTCGACTTTTCTTCTCTGGGCC
TGGATTTAGGCTGAAACGCATCAATAACCTCTGTCCCTGTCTCCTCTATT
GCGCATTTCCCACTCGTACCACTCCCCGTCCAGTACTACCTGAGCGGACT
GTTGACAGCCGTGGGGTGTCCGTACTGGGTGTTGGTGGGGTTGTTGGCGG
TCATCGCCGAGCGTGTTTTTGATGTCTTCGACGCCACACGAGCGGGGCTG
TGGGTCTCCCTGGCTACGGCGACGCTGGGTCCGTTAATCGAGGTTTGTGT
CGCTGAACCAAACGGCTTGGAGTTGTGTCACAGGGAAAAAGTACGGTGCT
ACCGACACGGAATGCTAAAATGGTGTAACCATTCGCAGGTGACGATCTGG
CGGTGTACGGTGTACTTCCACGTCACGTAGCTTTGGGGCAGCCATACCTG
TATACTACTAGTCCGTCGGCGATAGGTTTGCGTTTGGCAGGCGGTCGTTT
ATTCGACTTTTCGCTCTCTCAAGGGTACGTACGCCTTCGCTACAGTATCT
AAAGGGAAATTGTCCACCCTATCATTTTCAGCTTGTTCCGAAAATACACA
GGCCAATTCCATGTAATCATGTTCATACTGTCTGTGAAGGTGGTAGTATT
ATACCACAACGACAATACCACAAACAACTATGTGTGCTCCTATTTTATTT
TTTCTTACAATATGACAACGACTCCATGTCTTCCACAGACGTTCACGATA
TATTCGAAAGTTGTACCCTATAGCCGTCTACTAGTTCTTTTCCCTAGATG
CGGGTTCTTGCGTAGTGGGTACCTTGTCTCTCTCGCCTCGTCACACCGGA
CGGGGTTCACTCTTGCTCTCTCACCCCCCTCGCCCCCCCCCGTCCCACAC
ACATACACACTCCCCCATCCTTAAAATAGATTTTCCTGGTGAACGCAACG
GATCTGTACGTGTACAACGGAGCCGACTTTTTCGGGGTGGACAGCTGGAT
TCCGGTGAGAGAAAAGATAGGGCGATCGGGATTGAGTCGATTCACGCACC
GCCGTGATGATCGATTACGTTTATACTGTAGGAGAGCATCAAGGTCGATC
AACCTGGTATTAAGGACAACAACCAGGCGGCGCATGATCAGTTGAAGCGG
GGGTGATCATGGTAGGGCACGCCTGTTCGAACGCAGATCGTAGTCGTGAT
GCTGGCTTGTGGATCGTTGCCGCAATCGTGACGATCGGCCTTGTTGGTGG
TTGTGAAGGCAACGACGCGTATGTCCGGGTGGACAATCAACGAAAGGGCG
CTCTCCACCAAACGTCCACCGACACGATGGGTAGTTTCAAGCCGTTGTTC
GCCGGTGGTGCCATTGTTGGCACCTCTCTGAGTCGTGCGACCTGCCATGT
TATTGTTGCTGTCGCCTCACAACATGCCTCGAATCCCATCCCCGCCACCA
GCCGAAAAAGTTCTCGTTTGCCGTTGTTTTGTGCGACGCGCCGTGTTGTT
GTGATTTTGCTATCGGGGGCTCCGTCGATTCAGATCGTCTACTTCTGCGG
GGGTCCCGCCGTGGGAAACTTGGCCAGGACAATATACGCAAAACTCCTCG
CGGTGGAAAGAAAGGAGGGGCGCAACCTGAGGTAGCTTGTTCTTAGGGCC
AAACCTACTTGAATAAGAAACCGAGTTTATAGACGTTGTCGGGCTGGGCC
TTCGGTGTTACCAAAGCGGTTAGGTGGCATGGTTTCCATCCGGCAAAACA
CAGAGAAACGTTCTTCTTGCATGGCCAGTTTTGTGTTGGTGCGACGCTCC
ATGTTCCTCCATAGAGCTCGTTCTGCACGCGCTACAATTGTGTCCCAGAG
AGAGTACTTCAGTGGCCCGAATCAAGCCCTTTTCTGGCCCGCCCTCCTCT
GTGCTTGAAACTTCAAGATTTCGTTTTTGGTTGGCGAAGAGAAACAAAGA
ATGAACGGTTCGCATGAAGCTGTCGAAACATGGGTAGGTCCTCCCGAATT
TGTCTGAAGAGCAAAAAATCGAGAATGGAAGACGGAGATTTGGTGAGAGC
GGCATGTTCTTTGCACTTGAAACGAGTCGATGGGAGGACGCCGAAAAACA
AGTGGCAGCATTAAGATGCCTAGAAGTCGTGTTATGAACGCGGTCTTGAA
TGCCGGAAGGTAGACATAGTCGTGGACCCTAAAAAGCGCCGGTACGTGCC
AGGCCACTCCA back to topCoding sequence (CDS) from alignment at Scaffold_235:12129..16639- >EsuBft2510_2a-0001 ID=EsuBft2510_2a-0001|Name=EsuBft2510_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=882bp|location=Sequence derived from alignment at Scaffold_235:12129..16639- (Ectocarpus subulatus male Bft15b) ATGCGCATTTCCACCAAAAAGGCAGCACTTGCAGGCGCAGCGGCCGTCTT CTTGCATCACTCACAATGTGTGGGGTACACATCATTCATGCGGCCGTTGC ACCCCCGCCATTGTAGCGCAATCACTAGGGCAATGCCCTACCGACGCAGC GACCGAAATCATGTGCTGAAGCTTGCTGCTGGAGGAGGCCCGCCCCGTGC TGTCGGAGAGTCGACTCCTTTGTCTCGGGCGCGAGACGTGTTGTTTGAGC CGGCCTTTCGAAGTTTACTCCCGCCAATGGCCGCGGCAGGCGCGCTGCTC GGCCCCAACCTCGACAACTACCACAGCGCCTTCGGAGTGTTGGCGTACAA GCACCCCATCGAGCTGAACGTTGCCGGACGCTTGATCGTTACTACGGACT GGTGGGTGCCGCCTCTGTTCGCCGTTGCTGGAGCTGGGATCGGGGCGCTC TATATACTTTTGGACGCGGCCTTGGAGACTCCGCAGGCGCAGCGGGAGCC GGTGTGGCGAGACGTTCTCCTGTCCATTTCTTTGTTCAGCTTCCAGTACT ACCTGAGCGGACTGTTGACAGCCGTGGGGTGTCCGTACTGGGTGTTGGTG GGGTTGTTGGCGGTCATCGCCGAGCGTGTTTTTGATGTCTTCGACGCCAC ACGAGCGGGGCTGTGGGTCTCCCTGGCTACGGCGACGCTGGGTCCGTTAA TCGAGATTTTCCTGGTGAACGCAACGGATCTGTACGTGTACAACGGAGCC GACTTTTTCGGGGTGGACAGCTGGATTCCGATCGTCTACTTCTGCGGGGG TCCCGCCGTGGGAAACTTGGCCAGGACAATATACGCAAAACTCCTCGCGG TGGAAAGAAAGGAGGGGCGCAACCTGAGGTAG back to top
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