Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2505_4 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Length | 162 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2505_4a-0001 ID=EsuBft2505_4a-0001|Name=EsuBft2505_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1623bp|location=Sequence derived from alignment at Scaffold_347:204419..208129+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GGTAGAGTGAGCAAGGGTGGGGCGAGCACCACAGCACCACAGCACCACCC
GTCGCTCGACCAACGCACGAAAGCAGAACACAATACCGGAACACAATAAT
ATCGGAACACAACGACTCAACAGGGGCTACCGTACTTATAAACGTACCAT
AAATCCTCGGGGTGATGCACTATCCACGAAGAACATTCCTACAGAACGTT
CCTCGCTGTTCTGATAATATGTGGCTACTCGGCAGTCTGCAACGCCGACA
GTCCCGCAATTCAAAACTGTCCAATCAAATTGTGCTACGTTACTCTGTCG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTACGCCCACCCCCTGCCCCCCCGGTGTTTGCCATCGGG
ATTGGGTTTTCGTCGCTTGGCAACGACGTTAACCTGCCCTTCGAGACGCT
CATCAGTAGGTGCAAGCAACTGTTTGACGATAACAGGAGGAGCAAAAAAA
AGGCGGAGAGGGACTCCGAGGGCAAGACCGGGGAGGGCGAGAAGGACGCT
GAAGTATTCGACGAGGAGAACGAGGAGGGGGGTTGCAAAAGAACGGATTG
CGAATTGCTCAAGGCTATGGCATGTCGTGAGGCCGGGATGGCGTCGAAGA
AGAAGGGCACAGGCCCGTCGAAGAAGCACATGGCACAGGGACTGGCGTTG
CGTGAAAGTGCCCGCGACGGTTCGCCAGGCCGAGGTGCGACACAGGGTTT
CCCGGTGGTACAACCGGCAGGTGGCAGAGGCAAGGGCAGCAGCAGCAACT
CCATGTCCCGTTACTCTGCGGCCGCTGCGGCGAACAACCAGTCCCGGGGG
AAGGACTGTCGGTTCCGACGGGAATCAGAGACCTGTGACGGCGAAGTTTC
TTCTCGTTCGTTGGCAACCGCAACCGGTGAAGACGAGGAGGAAGAGGAGG
GGCTATCCGACGAACCAGATGCTTGGGACGAAGAATGGAAGGCGTCCCTG
ATAGCAAGCGGCAAGGCTGGGCGGGAGACGAGGAGCGGGAAGGGTGGGGG
AAAGCGGACCCGGTCTGGTCCACCTCTATCCTCCACGATATGTGGCTCTG
CCGGCCTCCAAAACAGGCTGAACAGCGTGAGCGGCTTGGTCTGCCAAAAA
ATGACCGCGCTGGCGGTGCCGACTGTGGGTGGTGGCGAGCAGGGAGGGGC
GAGCAGCAGGACGGAATCGGATGAGATCAAAGACCTGCTCAAGAGCAGGC
GCGCTTCCTCCCTTCGGCGGGTGAACCAGCAGATCTTCAACGCAATGGGG
ATGATGCATGGTGGCGTCCAACCGCACCCACTCGGGATGCAAGCGGGTGC
AGGCGCGCTTCCTCCCTTCGGCGGGTACGCTGGATTCGGCGGTAGCGCCG
CCTCGGCAGGGCTGGCTCTTCCTGCAGCTGTCGGAGTACCTCCTCCTGCG
CAACCTTCGTAGGGTGCAACCGCGGCGGGTGCAAGGGCGTTGCCCGTGGT
TGCTGGGGGCGGACAAGCCGCCC back to topprotein sequence of EsuBft2505_4a-0001 >EsuBft2505_4 ID=EsuBft2505_4|Name=EsuBft2505_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=447bp
MWLLGSLQRRQSRNSKLSNQIVLRYSVXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPPAPPVFAIGIGFSSL
GNDVNLPFETLISRCKQLFDDNRRSKKKAERDSEGKTGEGEKDAEVFDEE
NEEGGCKRTDCELLKAMACREAGMASKKKGTGPSKKHMAQGLALRESARD
GSPGRGATQGFPVVQPAGGRGKGSSSNSMSRYSAAAAANNQSRGKDCRFR
RESETCDGEVSSRSLATATGEDEEEEEGLSDEPDAWDEEWKASLIASGKA
GRETRSGKGGGKRTRSGPPLSSTICGSAGLQNRLNSVSGLVCQKMTALAV
PTVGGGEQGGASSRTESDEIKDLLKSRRASSLRRVNQQIFNAMGMMHGGV
QPHPLGMQAGAGALPPFGGYAGFGGSAASAGLALPAAVGVPPPAQPS back to topmRNA from alignment at Scaffold_347:204419..208129+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2505_4a-0001 ID=EsuBft2505_4a-0001|Name=EsuBft2505_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3711bp|location=Sequence derived from alignment at Scaffold_347:204419..208129+ (Ectocarpus subulatus male Bft15b)
GGTAGAGTGAGCAAGGGTGGGGCGAGCACCACAGCACCACAGCACCACCC
GTCGCTCGACCAACGCACGAAAGCAGAACACAATACCGGAACACAATAAT
ATCGGAACACAACGACTCAACAGGGGCTACCGTACTTATAAACGTACCAT
AAATCCTCGGGGTGATGCACTATCCACGAAGAACATTCCTACAGAACGTT
CCTCGCTGTTCTGATAATATGTGGCTACTCGGCAGTCTGCAACGCCGACA
GTCCCGCAATTCAAAACTGTCCAATCAAATTGTGCTACGTTACTCTGTCG
ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNTACGCCCACCCCCTGCCCCCCCGGTGTTTGCCATCGGG
ATTGGGTTTTCGTCGCTTGGCAACGACGTTGTAAAACAAGCCAATTCACT
TCGTGAACTCGGCAACCAGGCTACCGGGTTTTTTTTTACCTCCGGTTTTT
TTATTGGCGGTAACCATACTGGTGGTCGAGTAGATCATGTTGTGCGGGGT
GGAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGAAGTGAAAGCACCAGAGAGTAAATTAAGTCA
TACGCAGCTGTCATTCGTACGCAAGGAAGTAAGCAGAAGATGCCGAACAC
CCTTAGCAGGATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACG
GCGCTTCGCGCTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGT
GCTCCGTCCCGGCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACG
GCATGCACGACTATGAGTTCACCCTCCTCCCCCCCTATACCGCAGAACCT
GCCCTTCGAGACGCTCATCAGTAGGTGCAAGCAACTGTTTGACGATAACA
GGAGGAGCAAAAAAAAGGCGGAGAGGGACTCCGAGGGCAAGACCGGGGAG
GGCGAGAAGGACGCTGAAGTATTCGACGAGGAGAACGAGGAGGGGTGCGA
GGCAAGTCGATCTTGTTGTGTGTTTTAGAGGCCTCGCAAACCATGAAGCG
GAACCGCGTTGCTATTCGGTGGTTGCCGACATGCAGTTGATAACGTGCCG
CCATAATGCCTAAACTGACGCAAATAAGTTTTCGAAGACCTGAAGTCAGA
GGCCGGTTGGCCCGAAGGGTTTCTCAGCATCATCGAGTAATATTTCGGGT
GTTGCTGTAGTCCTTCTCACGCGGGCCCTTGCGTTCGTAGGACGCGGCGT
AGACGCGGCGTCATCTTCCATAACTAAATCTAGACCATGCACTCAAAAGA
ACAATGCATAGTCTTGCTACGCTTATTTTTCGCCAGCGGTACTGGCCACC
CACCCACCCCACCCACGACGGTTGCGTTGATTAGACTATAGCGTCGATAA
CTTTGGGAACGCCAAATGTTAATCACCCAGTTTTCCCCGTGGAGATGGTG
CAAAGTCCGCCGCCAATCTCTTACAGCGCAAAAAGTCGTCCTTCCCCTGG
CAACCGCTCAAGGCGGGCGTGGGCGTAGCGCCTACCTTGTCGAACTTGTT
AAGGTGTCAGGGTTAGCCAAACCATAAGTATATTCGGGGGTAGGTAGCAG
TGAAACCGCTGAGAGCTACGTAAGAGCTATGTAGGTCACAGATGTAGGGG
TTGCAAAAGAACGGTACAAATGCCCGTGAAACTCAGAGAGGACCAGCACG
GTTGCGATACCAATGTTGCCTGGCTGGGTTACGTTAGAACGCGTACGGCG
TGTAGTATGTGGATCACTGCACCCCCGTGTCCGGCGGGTCCTACGCAGTC
CATCTCGTCTTGTGCTTTTGGTCGAGCAAAGCGGTTATGAGTTCACTCGA
GCGAAGCGGACCTTTTTTTTTTGCCCGCCGCATTTGTCGTTGGGGCATCC
ATTGACGCCCCCCCTCCCCCCCCAATACCCCCGCCAAACAACCAAACAAG
TACCCTCGAGCCAAATAATGGTGTGCAAAGTNCCCCACTGGTTGTAGGTT
TCCCGGAGCAGGGTCATAGACTGATCTGGGCAGGAGCTTGCATTAACTTC
AGAATCGAATGATCATGTGTTGTAGACGTGCGCTGCCTTCACTAAACTGT
TCGATTATATGTAACTAACGACATGTAGCTATTAGTCCAGGAGGGCGACA
ACAAGCAGCAAGAGCTGGGAGTGCATGGTCTCTGCCGCCCTGACGTGCCC
GCCCCACATGTCCATTCTTCGTCTGACATGTGCTGTGCGTCGTTCAGGAT
TGCGAATTGCTCAAGGCTATGGCATGTCGTGAGGCCGGGATGGCGTCGAA
GAAGAAGGGCACAGGCCCGTCGAAGAAGCACATGGCACAGGGACTGGCGT
TGCGTGAAAGTGCCCGCGACGGTTCGCCAGGCCGAGGTGCGACACAGGGT
TTCCCGGTGGTACAACCGGCAGGTGGCAGAGGCAAGGGCAGCAGCAGCAA
CTCCATGTCCCGTTACTCTGCGGCCGCTGCGGCGAACAACCAGTCCCGGG
GGAAGGACTGTCGGTTCCGACGGGAATCAGAGACCTGTGACGGCGAAGTT
TCTTCTCGTTCGTTGGCAACCGCAACCGGTGAAGACGAGGAGGAAGAGGA
GGGGCTATCCGACGAACCAGATGCTTGGGACGAAGAATGGAAGGCGTCCC
TGATAGCAAGCGGCAAGGCTGGGCGGGAGACGAGGAGCGGGAAGGGTGGG
GGAAAGCGGACCCGGTCTGGTCCACCTCTATCCTCCACGATATGTGGCTC
TGCCGGCCTCCAAAACAGGCTGAACAGCGTGAGCGGCTTGGTCTGCCAAA
AAATGACCGCGCTGGCGGTGCCGACTGTGGGTGGTGGCGAGCAGGGAGGG
GCGAGCAGCAGGACGGAATCGGATGAGATCAAAGACCTGCTCAAGAGCAG
GTGAACCAGCAGATCTTCAACGCAATGGGGATGATGCATGGTGGCGTCCA
ACCGCACCCACTCGGGATGCAAGCGGGTGCAGGCGCGCTTCCTCCCTTCG
GCGGGTACGCTGGATTCGGCGGTAGCGCCGCCTCGGCAGGGCTGGCTCTT
CCTGCAGCTGTCGGAGTACCTCCTCCTGCGCAACCTTCGTAGGGTGCAAC
CGCGGCGGGTGCAAGGGCGTTGCCCGTGGTTGCTGGGGGNAGACCTGCTC
AAGAGCAGGTGAACCAGCAGATCTTCAACGCAATGGGGATGATGCATGGT
GGCGTCCAACCGCACCCACTCGGGATGCAAGCGGGTGCAGGCGCGCTTCC
TCCCTTCGGCGGGTACGCTGGATTCGGCGGTAGCGCCGCCTCGGCAGGGC
TGGCTCTTCCTGCAGCTGTCGGAGTACCTCCTCCTGCGCAACCTTCGTAG
GGTGCAACCGCGGCGGGTGCAAGGGCGTTGCCCGTGGTTGCTGGGGGCGG
ACAAGCCGCCC back to topCoding sequence (CDS) from alignment at Scaffold_347:204419..208129+ >EsuBft2505_4a-0001 ID=EsuBft2505_4a-0001|Name=EsuBft2505_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1344bp|location=Sequence derived from alignment at Scaffold_347:204419..208129+ (Ectocarpus subulatus male Bft15b)
ATGTGGCTACTCGGCAGTCTGCAACGCCGACAGTCCCGCAATTCAAAACT
GTCCAATCAAATTGTGCTACGTTACTCTGTCGANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGCC
CACCCCCTGCCCCCCCGGTGTTTGCCATCGGGATTGGGTTTTCGTCGCTT
GGCAACGACGTTAACCTGCCCTTCGAGACGCTCATCAGTAGGTGCAAGCA
ACTGTTTGACGATAACAGGAGGAGCAAAAAAAAGGCGGAGAGGGACTCCG
AGGGCAAGACCGGGGAGGGCGAGAAGGACGCTGAAGTATTCGACGAGGAG
AACGAGGAGGGGGGTTGCAAAAGAACGGATTGCGAATTGCTCAAGGCTAT
GGCATGTCGTGAGGCCGGGATGGCGTCGAAGAAGAAGGGCACAGGCCCGT
CGAAGAAGCACATGGCACAGGGACTGGCGTTGCGTGAAAGTGCCCGCGAC
GGTTCGCCAGGCCGAGGTGCGACACAGGGTTTCCCGGTGGTACAACCGGC
AGGTGGCAGAGGCAAGGGCAGCAGCAGCAACTCCATGTCCCGTTACTCTG
CGGCCGCTGCGGCGAACAACCAGTCCCGGGGGAAGGACTGTCGGTTCCGA
CGGGAATCAGAGACCTGTGACGGCGAAGTTTCTTCTCGTTCGTTGGCAAC
CGCAACCGGTGAAGACGAGGAGGAAGAGGAGGGGCTATCCGACGAACCAG
ATGCTTGGGACGAAGAATGGAAGGCGTCCCTGATAGCAAGCGGCAAGGCT
GGGCGGGAGACGAGGAGCGGGAAGGGTGGGGGAAAGCGGACCCGGTCTGG
TCCACCTCTATCCTCCACGATATGTGGCTCTGCCGGCCTCCAAAACAGGC
TGAACAGCGTGAGCGGCTTGGTCTGCCAAAAAATGACCGCGCTGGCGGTG
CCGACTGTGGGTGGTGGCGAGCAGGGAGGGGCGAGCAGCAGGACGGAATC
GGATGAGATCAAAGACCTGCTCAAGAGCAGGCGCGCTTCCTCCCTTCGGC
GGGTGAACCAGCAGATCTTCAACGCAATGGGGATGATGCATGGTGGCGTC
CAACCGCACCCACTCGGGATGCAAGCGGGTGCAGGCGCGCTTCCTCCCTT
CGGCGGGTACGCTGGATTCGGCGGTAGCGCCGCCTCGGCAGGGCTGGCTC
TTCCTGCAGCTGTCGGAGTACCTCCTCCTGCGCAACCTTCGTAG back to top
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