Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2381_6 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 252 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2381_6a-0001 ID=EsuBft2381_6a-0001|Name=EsuBft2381_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2527bp|location=Sequence derived from alignment at Scaffold_189:678574..681222+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CATGGTCGCCACCCAGCCTGTGGTCAAGCCTGAGGCGGCCTCCCTCGCTG
GTGGAGCCGTCTCCACCCCTGCGATCCGAGCAACGACCGCTGGCGCCGGC
GAGAGGTCTTCGGCTACCCCCCGCCCGGCGTCGCCGGTCCCCCTGGCCCC
GCTTTCCACGGCTTCGGCAGCAACTGCGGCTTCAGCTGCCCCGGCTGCTT
CGGCGGCCCCCGCTGCTTCGGCGGCCCCCACTATTTCGGCAGCCCCCGCT
GTTTCGACAGCCCCAGCGGCTCCGGCTGCACCGTGGCGACTCCGGCGTCT
TCGGCGTTCCAGCCCAAGGCCCGCCGCGTCAAGGCCAAGCCGGTCCAGCT
CACCATGCGAGAGAGTAGCTCGGGCGAGGACTCGGGCTGGAGTTCCGCGG
GAGCGCCTCGCCGCTCCCCAGAGCCATCTTCATCGGCGGGCGATGGTGGG
GCACGGCAGCAGGCCAAGCGCCACACGAACGGGACTCGTGGCAGTGGAGG
CGGATCGGGCTCAGGCTCAGACTGGAGTCTCACCCGGAAGCACGGCGCTC
GGAAGGGAGCTTCTTCCAGGCAGGTAGTCCCGTCCCTTATGGATGCGACG
TTGAGTGATCGTTTCCTTTTACATGATGTTTTTTTTTCTCAGGCTTCGGC
CCCCCCCTCAACTTCGGTTGTTGGTACGGTTTCGCCCCCCCCTGTTTCCT
CGGACTCGGGGCTTTTGCGTCGAGTTGAGTTTTCGGACCTTCCCCCGCCT
TTGGCTTCCCCCGTTTCTTCGGAACTCTTTGCACGTTCTGTCCCTTCTGC
CGCATTCAATGCTCTAGACTCCGGACATGGTTGAGTTTTCGAATCCAGCC
CCGGTTTCGACCGCCCCTGTTTCTTTGGAAACCTCTGCACCCCGTAGCCT
TTCTACCGCTCGCCATGTCGTGGATCCACGACTGATGCAGAACCATGGGT
TTTCGAACCTCAACCCCCCTTCGGCGCTTGTACCACCTGTGCCGGGTGTT
TCGCGTAGTATGTTGTCCTCAGAACATGCTTCCACAGCTGCTTCGGTAGC
CGTCGCCCCACCCCCTTCTGTTTCCGATCATCGTGCCTTGCCACTTTCTT
CTAACACGGCACACACTCGTCAAGCATCGATCGATGCGACTGATGCAGCT
GCTCGTAATGCTCATGTAGCTACAGTACAACGAGCGTACATCACCCTCGA
CTTGAAAAAAGTTGAGAATGTCGCTACCATGCCCTTCTCCGCTACTCTGT
TGCCGGGAGACGGCTATCAGCAGCTTATTCGCACAACAAGAACGGCTTTG
TCCGATATTTTGCTGTTGTGTGATGAGCAGAGTGAAGGTTTGACAGACAC
TGATTTTGTGCGTGGATGGGAACTTCCTCTCGAAAAAAAACTCTTGAGTG
CGATCACCCCTGACAGGCCTTCTACCGCCGATCTCGTCCTTGCCATTATT
GATGACTTTCGGCTAATGAAACGGAGCTTGGATGGAGGAGCCCCTGGAGG
ACCAGACGCTTTCCAGATACTGTTGCACCACCTGGCGGAGCAATTTGACG
TCGGAGACAGCCAAGAGTCGTTTTTGCAGCTGCAACATTTTGGTGTAGCA
GATGGTACTCCTTTCGCGGATTATGTTCGGGCTTTTCCGATTGTTGGTTT
CGTCTGTGACTGGCTCTGAGCGTACTTTGGCCCCTAGTGTATCCATGGTT
TTCGAAATAGTGCGAAACTCGGTCGACAAGCAATTTCCGAGTCTGTCTCC
GCTTTTGTACCCGGGTGCTTTGGCCACTGCGGTCACTCCCTTTGAATCAA
TTGCAGTTATGTGGGAGGCGTTCGCGAATCTTCGTTCCACCACATCACGG
TGCACCGCGATACAATCCCTTTGACGGCATTCGTGACGTCTTCCGGGCTT
TTCGAGTGGTTGAAGATGCCTCAAGGCAGTTCGGCTGCCCCTGGGTGGTT
TTGCAAAGTTGTCAATGAAGTCATAAAAAATCTCCGCGGTGTTGCATCGT
ACATGGATAATTTGATCGTCTTTGATGACACCCCTGCTTCTCATGTTGGT
ACCATGCGCGCCCTCTTTGAACGCTTGCGTACGCACAACTTGAAACTCAC
GCATCCGAAAGCTACTGTTGGCGCTACTGAAGCAGACTTCCTCGGACACA
CCATCTCCCCTGACGGCGTTAGGCCTAACGGTGCCAAGGTTTCGGCCCTC
ACCAAATGCCTATGCCCAAGGATGTCAAGCAACTACGTTCCCTTCTCGGT
GGTCTCAGCTACTACCGTAAGTTCCTCCCCAACATGGCTAAACGCGTTCG
ACCTCTGACTACTCTACTCAAGAAGCAGGAGAAGCTTATTTCCACCCCTT
CCATGGAGCAAGCCGTTCGCGTTTTATTAGCTGAGTTGGCCAATCCTCCT
GTTGTGGTTTATCCAGATTGGGATGCCGTTTCAGACGGCTCGCGACCTTT
TCATCTTTACTGTGATGCGAGTCGCTGTGGTTTTGGTGGGACTCTCGAAC
AAGAACAGCCACATGGTTCCATTCGCC back to topprotein sequence of EsuBft2381_6a-0001 >EsuBft2381_6 ID=EsuBft2381_6|Name=EsuBft2381_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=191bp
MVATQPVVKPEAASLAGGAVSTPAIRATTAGAGERSSATPRPASPVPLAP
LSTASAATAASAAPAASAAPAASAAPTISAAPAVSTAPAAPAAPWRLRRL
RRSSPRPAASRPSRSSSPCERVARARTRAGVPRERLAAPQSHLHRRAMVG
HGSRPSATRTGLVAVEADRAQAQTGVSPGSTALGRELLPGR back to topmRNA from alignment at Scaffold_189:678574..681222+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2381_6a-0001 ID=EsuBft2381_6a-0001|Name=EsuBft2381_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2649bp|location=Sequence derived from alignment at Scaffold_189:678574..681222+ (Ectocarpus subulatus male Bft15b)
CATGGTCGCCACCCAGCCTGTGGTCAAGCCTGAGGCGGCCTCCCTCGCTG
GTGGAGCCGTCTCCACCCCTGCGATCCGAGCAACGACCGCTGGCGCCGGC
GAGAGGTCTTCGGCTACCCCCCGCCCGGCGTCGCCGGTCCCCCTGGCCCC
GCTTTCCACGGCTTCGGCAGCAACTGCGGCTTCAGCTGCCCCGGCTGCTT
CGGCGGCCCCCGCTGCTTCGGCGGCCCCCACTATTTCGGCAGCCCCCGCT
GTTTCGACAGCCCCAGCGGCTCCGGCTGCACCGTGGCGACTCCGGCGTCT
TCGGCGTTCCAGCCCAAGGCCCGCCGCGTCAAGGCCAAGCCGGTCCAGCT
CACCATGCGAGAGAGTAGCTCGGGCGAGGACTCGGGCTGGAGTTCCGCGG
GAGCGCCTCGCCGCTCCCCAGAGCCATCTTCATCGGCGGGCGATGGTGGG
GCACGGCAGCAGGCCAAGCGCCACACGAACGGGACTCGTGGCAGTGGAGG
CGGATCGGGCTCAGGCTCAGACTGGAGTCTCACCCGGAAGCACGGCGCTC
GGAAGGGAGCTTCTTCCAGGCAGGTAGTCCCGTCCCTTATGGATGCGACG
TTGAGTGATCGTTTCCTTTTACATGATGTTTTTTTTTCTCAGGCTTCGGC
CCCCCCCTCAACTTCGGTTGTTGGTACGGTTTCGCCCCCCCCTGTTTCCT
CGGACTCGGGGCTTTTGCGTCGAGTTGAGTTTTCGGACCTTCCCCCGCCT
TTGGCTTCCCCCGTTTCTTCGGAACTCTTTGCACGTTCTGTCCCTTCTGC
CGCATTCAATGCTCTAGACTCCGGACATGTACGACGCGTTGAGTTTTCGG
ACCCTCCCCCGCCTTTAGATTCGCCTGTTTCCTCGGAACCCTTTGCGCCC
TCTGTCCGTTCTGCCGTATTCAATGCTATAGACTCCGGACGTGTACGTAG
GGTTGAGTTTTCGAATCCAGCCCCGGTTTCGACCGCCCCTGTTTCTTTGG
AAACCTCTGCACCCCGTAGCCTTTCTACCGCTCGCCATGTCGTGGATCCA
CGACTGATGCAGAACCATGGGTTTTCGAACCTCAACCCCCCTTCGGCGCT
TGTACCACCTGTGCCGGGTGTTTCGCGTAGTATGTTGTCCTCAGAACATG
CTTCCACAGCTGCTTCGGTAGCCGTCGCCCCACCCCCTTCTGTTTCCGAT
CATCGTGCCTTGCCACTTTCTTCTAACACGGCACACACTCGTCAAGCATC
GATCGATGCGACTGATGCAGCTGCTCGTAATGCTCATGTAGCTACAGTAC
AACGAGCGTACATCACCCTCGACTTGAAAAAAGTTGAGAATGTCGCTACC
ATGCCCTTCTCCGCTACTCTGTTGCCGGGAGACGGCTATCAGCAGCTTAT
TCGCACAACAAGAACGGCTTTGTCCGATATTTTGCTGTTGTGTGATGAGC
AGAGTGAAGGTTTGACAGACACTGATTTTGTGCGTGGATGGGAACTTCCT
CTCGAAAAAAAACTCTTGAGTGCGATCACCCCTGACAGGCCTTCTACCGC
CGATCTCGTCCTTGCCATTATTGATGACTTTCGGCTAATGAAACGGAGCT
TGGATGGAGGAGCCCCTGGAGGACCAGACGCTTTCCAGATACTGTTGCAC
CACCTGGCGGAGCAATTTGACGTCGGAGACAGCCAAGAGTCGTTTTTGCA
GCTGCAACATTTTGGTGTAGCAGATGGTACTCCTTTCGCGGATTATGTTC
GGGCTTTTCCGATTGTTGGTTTCGTCTGTGACTGGCTCTGAGCGTACTTT
GGCCCCTAGTGTATCCATGGTTTTCGAAATAGTGCGAAACTCGGTCGACA
AGCAATTTCCGAGTCTGTCTCCGCTTTTGTACCCGGGTGCTTTGGCCACT
GCGGTCACTCCCTTTGAATCAATTGCAGTTATGTGGGAGGCGTTCGCGAA
TCTTCGTTCCACCACATCACGGTGCACCGCGATACAATCCCTTTGACGGC
ATTCGTGACGTCTTCCGGGCTTTTCGAGTGGTTGAAGATGCCTCAAGGCA
GTTCGGCTGCCCCTGGGTGGTTTTGCAAAGTTGTCAATGAAGTCATAAAA
AATCTCCGCGGTGTTGCATCGTACATGGATAATTTGATCGTCTTTGATGA
CACCCCTGCTTCTCATGTTGGTACCATGCGCGCCCTCTTTGAACGCTTGC
GTACGCACAACTTGAAACTCACGCATCCGAAAGCTACTGTTGGCGCTACT
GAAGCAGACTTCCTCGGACACACCATCTCCCCTGACGGCGTTAGGCCTAA
CGGTGCCAAGGTTTCGGCCCTCACCAAATGCCTATGCCCAAGGATGTCAA
GCAACTACGTTCCCTTCTCGGTGGTCTCAGCTACTACCGTAAGTTCCTCC
CCAACATGGCTAAACGCGTTCGACCTCTGACTACTCTACTCAAGAAGCAG
GAGAAGCTTATTTCCACCCCTTCCATGGAGCAAGCCGTTCGCGTTTTATT
AGCTGAGTTGGCCAATCCTCCTGTTGTGGTTTATCCAGATTGGGATGCCG
TTTCAGACGGCTCGCGACCTTTTCATCTTTACTGTGATGCGAGTCGCTGT
GGTTTTGGTGGGACTCTCGAACAAGAACAGCCACATGGTTCCATTCGCC back to topCoding sequence (CDS) from alignment at Scaffold_189:678574..681222+ >EsuBft2381_6a-0001 ID=EsuBft2381_6a-0001|Name=EsuBft2381_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=576bp|location=Sequence derived from alignment at Scaffold_189:678574..681222+ (Ectocarpus subulatus male Bft15b)
ATGGTCGCCACCCAGCCTGTGGTCAAGCCTGAGGCGGCCTCCCTCGCTGG
TGGAGCCGTCTCCACCCCTGCGATCCGAGCAACGACCGCTGGCGCCGGCG
AGAGGTCTTCGGCTACCCCCCGCCCGGCGTCGCCGGTCCCCCTGGCCCCG
CTTTCCACGGCTTCGGCAGCAACTGCGGCTTCAGCTGCCCCGGCTGCTTC
GGCGGCCCCCGCTGCTTCGGCGGCCCCCACTATTTCGGCAGCCCCCGCTG
TTTCGACAGCCCCAGCGGCTCCGGCTGCACCGTGGCGACTCCGGCGTCTT
CGGCGTTCCAGCCCAAGGCCCGCCGCGTCAAGGCCAAGCCGGTCCAGCTC
ACCATGCGAGAGAGTAGCTCGGGCGAGGACTCGGGCTGGAGTTCCGCGGG
AGCGCCTCGCCGCTCCCCAGAGCCATCTTCATCGGCGGGCGATGGTGGGG
CACGGCAGCAGGCCAAGCGCCACACGAACGGGACTCGTGGCAGTGGAGGC
GGATCGGGCTCAGGCTCAGACTGGAGTCTCACCCGGAAGCACGGCGCTCG
GAAGGGAGCTTCTTCCAGGCAGGTAG back to top
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