Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2347_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 317 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2347_4a-0001 ID=EsuBft2347_4a-0001|Name=EsuBft2347_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3172bp|location=Sequence derived from alignment at Scaffold_347:186814..191254+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
NNNNNNNNNNNCCCCCCTCTCCCCTCGCTATACCATAGAACCTGCCCCTC
GAGACACTCATCAGTAGGTGCAAGCAAATGTTTGACGATATCAGGACGAG
CAAAGAAAAAGCGGAGAAGGACTCCGAGGGGAAGACCGGGGAGGGCGAGA
AGGACGCTGAGGTGTTCGACGAGGAGAACGAGGAGGGTCCGAGGCAAGAT
TGCGAATTGCTCAAGGCTATGGCATGGCGTGAGGCCGGGATGGCGTCGAA
GAAGAAGGACACAGGCCCGTCGAAGGAGCACATGGCGCAGGGACTGGCGT
TGCGTGACAGTGCCCGCGACGGTTTGCCAGGCCGAGGTGCGACACAGGGT
TTCCCGGTGGTACAACCGGCAGGTGGCAGAGGCAAGGGCGGCAGCAGCAA
CTCCAAGTCCCGTTACTCTGCGGCCGCTGCGGCGAACATCCGGTCCCGGG
GGGAGGACTGTCGGTTCCGACGGGAATCAGAGACCTCTGACGGCGAAGGT
CCTTTCGTTGGCAACCGCACCCGGTGAAGACGAGGAGGAAGAGGAGGAGC
TATCCGACGAACCAGATGCGTGAGACGAAGCCCGGAAGGCGACCCTGTTA
CCAAGCGGCAAGGCTGCGCGGGGGACGAGGAGCGGGAAGAGTGGGGGAAA
GAGGACCCGGTCTGTTCCACCTCTATTCTCCACGATGAGTGGCTCTGCTG
GCCTCCAAAACAGGCTGAGCAGCGTAATCGACTTGGTCCGCCAGAAAATG
ACCGCGCCGGCGGTGCCGACTGTGGGTGGTGGCGAGCAGGGAGGGGCGAG
CAGCAGGACGGAATCGGGTGAGATCAAAGACCTGCTCAAGAGCAGGTGAA
CCAGCAGATCTTCAACGCAATGGGGATGATGCATGGTGGCGTCCAACCGC
ACCCACTCGGGATGCAAGCGGGTGCAGGCGCGCTTCCTCCCTTCGGCGGG
TACGCTGGGTTCGGCGGTAGCGCCGCCTCGGCAGGGCTGGCTCGTTCTGC
AGTTGTCGGAGAACCTCCTCCTGCGCAACCTTCGCAGGGTGCAACCGCGG
CGGGTGCAAGGGCGTTGCCCGTGGTTGCTGGGGGCGGACGAGCCGCACCT
TTTGGTGATGCCTCGTCCGCAGGAGGGGGGGGGGGCGTCTTCCGAGCTTC
GGTGCTTCTTATGGCGGACGAGCGACTGGTGCAACCTCTGCAGTGGCGGC
GGGCGGTGCAGTCCGGGTTAGGGCCCCGCGGAAGGCTGCGCTTACCACGA
GTGGACAGACGCTCTGCGAGTGTGGTCTTCCGGCATCCCACGGGGAGGTG
AAGTCGGGAGTAAGGGAGGTGTTGCGGCATTTCATTGCCGAACTGGTGTC
ATTCTAATGTTGTAGAAACGTCCGCGAATTAGTCCCTCATCAGGTGCGGA
ACCTCCAAAATCCTCCCTCCCCCCCTGCCTCTGTCCATGCGCCTCGTTTC
GGGATTGCACCAGTACGTCCTCGTCGGGTTTAGGGTGTGTTATTTTTTCC
GGCAGGCTTCTTGAACTCTGTTGATGGCGTAGTTGGCTTATGCTTAGGAC
GTTGGCCTATTGCCCGTATGCCCCTCTCGCTCGGCTCTTAGTGCGTTATC
CGCAATCCCTGAGCCCCCCCCCCCCGCCCAAATGCGCTCCGACACATCGA
CACCGCCCTCTTTTCTACATGCGTCTGTGTTTCTGCGTCCTCCACGGCAC
GAAGAAGGGACGAAAGTACGTAACCTGCCCAAGTTCGACCGGAATCAGAT
GTGCAACTTCCACAAGTTCCTCGACCCAGCCGCGCCTATGCCACAGGTTC
AGGCTGAAGGGAAGGCAGCCGAACCGCGTGCGCGGAAGAAGGCTAGGCCC
GGCCACGCGGCCGCGACGATCTCCTCGACGCAGCTGCAGGCGTAACGCCA
AGCCCAAGGCCGAAAGCGTTAGGGTTAGCCTACAAGTACTTGTACGCTCA
GCCGTCTTGTCTCCATGGAACAGCTTTTCGTTCTTTTTCTTTTTTGTTTC
CTCTCTGTTTTTTTTTTTTTCAACTGCGAGTCGTATTGTACTCTGCAACC
GCAGTACGGTTTATTGCCTCTGTCGAAAGCTCATCTGACTCTTGTTGCGT
TGTCCTCTCTTATTTTTATCCTTTTTCGTTTTTTTCTTTCTCGAGGAGGT
TACACTTTAGGTAGGGTAGCAAGGGATGTGGGGTAGACTGTAGGTACGGT
CGATGTTTTGTCGGTCACTTCTGGTGACATGTCGTATTGTCCACGTATAA
AATTATGAGGGGGGGGGTAGGTATATCCGGGAGGTCTTTTCGTCTTGACA
TCGAGATTTCAGGTTTGATTGCAGCTTGTCGTTATCATTGTCTTCGTTAG
CCGTTACAGAGGTTTGTCCTGTCGTTCCCAAACCAGTTCCTTTTTGCAAG
GTCGACGTCACTGCTCGTTTGTGGTCATGTTTGGCCTCAAATATTGGCTG
GGCGCCCAGTGCCTGGAACTGTGGGTCCTTTCGATTCGTTTGCGTTGCCC
ATAGGCAAGTGTTGTTGCCACTAGGGCATGGGTGCCGTTTACGAAACCCA
GTTTGACCTGGTCAGTTCGAGCACGGTACGCACGTGGTTGTGGTGGTGTA
AGTGGCTCCATGTATCGGGCAACTGCTTTTGCTGTGACTTGGTACCGCTC
TTTCCTGTTTGCAGGAGGGTTCGTTCGTAGACCTGTCCTGTCCTGTAGTC
ATCCTTGTCATAACTTGTTGCCCGCAGGGTGTTGGTCTGAGTGCAGTTGC
ACGTCGCTTTGTCGGTGTTTGGTTTTTCGAACTCGGACATGTCGATCTGT
CTACACTTCGGTTGCCCTGCTTCGTTTGTGTCGTGCAGCTGCGTGCACCA
CCGAGAATGTTTTTCGGGCGTGTTGCTCTATGGTTTGGTTTGCGTTGCTG
TTTTTGATTTTAGTCTTGTTTTTTTCAAGTACCTGTGTCCTTTTGGGTTA
ACAACCCGTTTGTCTTGCTATTCTCGTTCGTGGAAGGGCACGTATGTAGG
TTGTCGGCATTTTGTTTCGTTTGATCGCTTGTTCTTGTAGCACATGCCGT
CGTTCTTCTAGCATATGGGTAACTGTTGCCAATTTCCGTTGGAATAAATG
GTTCCGATTTCGTCCGAGAGGTGGCATATGGGGGGGCGATTTGGTGCCTT
AGTAAGATTCTTCTCCGTAGGG back to topprotein sequence of EsuBft2347_4a-0001 >EsuBft2347_4 ID=EsuBft2347_4|Name=EsuBft2347_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=149bp
MFDDIRTSKEKAEKDSEGKTGEGEKDAEVFDEENEEGPRQDCELLKAMAW
REAGMASKKKDTGPSKEHMAQGLALRDSARDGLPGRGATQGFPVVQPAGG
RGKGGSSNSKSRYSAAAAANIRSRGEDCRFRRESETSDGEGPFVGNRTR back to topmRNA from alignment at Scaffold_347:186814..191254+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2347_4a-0001 ID=EsuBft2347_4a-0001|Name=EsuBft2347_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4441bp|location=Sequence derived from alignment at Scaffold_347:186814..191254+ (Ectocarpus subulatus male Bft15b)
NNNNNNNNNNNCCCCCCTCTCCCCTCGCTATACCATAGAACCTGCCCCTC
GAGACACTCATCAGTAGGTGCAAGCAAATGTTTGACGATATCAGGACGAG
CAAAGAAAAAGCGGAGAAGGACTCCGAGGGGAAGACCGGGGAGGGCGAGA
AGGACGCTGAGGTGTTCGACGAGGAGAACGAGGAGGGTCCGAGGCAAGTT
GATATTGTTCTGTGTTTTAGAGGCCTCACAAACCATGAACTGGAACGGCG
TTGCAATCCGGTGGTTGCCGACATGCAGTTGATCACGTGCCGCCATAAAG
CCTAAACTGACGCAAATTAGCTTTCGAAGACCTGAAGCCAGAGGCCGGTT
GGCCCTAAGGGTTTCTTAGCATCATCGAGTGATCTTCTTCATATTTCGGT
TGTTGCTGTAGTCCTTCTCACGCGGGCCCTTGCGTTCAGAGGACGCGGCA
TAGACGCGGCGTCATCTTCCATAACTATATCTAGACCGTGCACTCAAAAG
AACAACGCGTAGTCTTGCTAAGCTTACTTTGTCGCCAGCGGTACTGACCA
CCCACCCCCCCCACCCACGACGGTTGCTAGGATTAGACTAAAGCGTCGAT
AACTTTGGGAACGCCAAATGATAAACACCCAGTTTTCCCCGTGGAGATAG
TGCAAAGTCCGCCGCCAATCTATCGCAGCGCACAAAATCGTCCTTCCCCT
GGCAACCGCTCAAGCTGGGCGTGGGCGTAGCGCCTACCTTGTCGAACTTG
TTAAGGTGTTAGGGTTAGCCAAACCATAGGTATATTTGGGGGCAGGTAGC
AGTGAAACCGCTGAGAGGTAGTAAGAGCTATGTAGGTCACAGATGAAGGG
GTTACAAAACAACGGTAAAAATGCCCTTGAAACTCAGAGAGGACCAGCAC
GGTTGCCATACCAATGTTGCCTGGCTGGGTTACGGTAGAACGCGTACGGC
GTGTATTATGTGGATCACTGCACTCCCGTGTCCGGCGGGTCCTACGCAGT
CCATCTTGTCTTGTGCTTTTGGTCGAGCAAAGTGGTTAGGAGCTTACTCG
AGCGAAGCGGACGCTTTTTTTTTGCCCTGCGCATTTGTCGTTGGGGCGTC
CATTGACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCAATGGTTGTAGGTTTCCCGGAGCAGGGTTATAGATTGA
TCTGGGCAGGAGCTTGCATTCACTTTAGAACCGAATGATCATGTGTTGTA
GACGTGCGCTGCCTTCATTAAACAGTTCGATGATCGTCTCACGACATGTA
GCTATTAGTCCAGGGGGGCGACAACAAGCAGCAAGAGTTGGGAGTGCATG
GCCTCTGCCGCCCTGACGTGCCCGCCCCACATGTCCATTCTTCGTCTGAC
ATGTGCTGTGCGTCGTTCAGGATTGCGAATTGCTCAAGGCTATGGCATGG
CGTGAGGCCGGGATGGCGTCGAAGAAGAAGGACACAGGCCCGTCGAAGGA
GCACATGGCGCAGGGACTGGCGTTGCGTGACAGTGCCCGCGACGGTTTGC
CAGGCCGAGGTGCGACACAGGGTTTCCCGGTGGTACAACCGGCAGGTGGC
AGAGGCAAGGGCGGCAGCAGCAACTCCAAGTCCCGTTACTCTGCGGCCGC
TGCGGCGAACATCCGGTCCCGGGGGGAGGACTGTCGGTTCCGACGGGAAT
CAGAGACCTCTGACGGCGAAGGTCCTTTCGTTGGCAACCGCACCCGGTGA
AGACGAGGAGGAAGAGGAGGAGCTATCCGACGAACCAGATGCGTGAGACG
AAGCCCGGAAGGCGACCCTGTTACCAAGCGGCAAGGCTGCGCGGGGGACG
AGGAGCGGGAAGAGTGGGGGAAAGAGGACCCGGTCTGTTCCACCTCTATT
CTCCACGATGAGTGGCTCTGCTGGCCTCCAAAACAGGCTGAGCAGCGTAA
TCGACTTGGTCCGCCAGAAAATGACCGCGCCGGCGGTGCCGACTGTGGGT
GGTGGCGAGCAGGGAGGGGCGAGCAGCAGGACGGAATCGGGTGAGATCAA
AGACCTGCTCAAGAGCAGGTGAACCAGCAGATCTTCAACGCAATGGGGAT
GATGCATGGTGGCGTCCAACCGCACCCACTCGGGATGCAAGCGGGTGCAG
GCGCGCTTCCTCCCTTCGGCGGGTACGCTGGGTTCGGCGGTAGCGCCGCC
TCGGCAGGGCTGGCTCGTTCTGCAGTTGTCGGAGAACCTCCTCCTGCGCA
ACCTTCGCAGGGTGCAACCGCGGCGGGTGCAAGGGCGTTGCCCGTGGTTG
CTGGGGGCGGACGAGCCGCACCTTTTGGTGATGCCTCGTCCGCAGGAGGG
GGGGGGGGCGTCTTCCGAGCTTCGGTGCTTCTTATGGCGGACGAGCGACT
GGTGCAACCTCTGCAGTGGCGGCGGGCGGTGCAGTCCGGGTTAGGGCCCC
GCGGAAGGCTGCGCTTACCACGAGTGGACAGACGCTCTGCGAGTGTGGTC
TTCCGGCATCCCACGGGGAGGTGAAGTCGGTGAGTCTGTTGCACACATAC
TTTGGGACTTGGTCTACATCTGCAGGGAGTAAGGGAGGTGTTGCGGCATT
TCATTGCCGAACTGGTGTCATTCTAATGTTGTAGAAACGTCCGCGAATTA
GTCCCTCATCAGGTGCGGAACCTCCAAAATCCTCCCTCCCCCCCTGCCTC
TGTCCATGCGCCTCGTTTCGGGATTGCACCAGTACGTCCTCGTCGGGTTT
AGGGTGTGTTATTTTTTCCGGCAGGCTTCTTGAACTCTGTTGATGGCGTA
GTTGGCTTATGCTTAGGACGTTGGCCTATTGCCCGTATGCCCCTCTCGCT
CGGCTCTTAGTGCGTTATCCGCAATCCCTGAGCCCCCCCCCCCCGCCCAA
ATGCGCTCCGACACATCGACACCGCCCTCTTTTCTACATGCGTCTGTGTT
TCTGCGTCCTCCACGGCACGAAGAAGGGACGAAAGTACGTAACCTGCCCA
AGTTCGACCGGAATCAGATGTGCAACTTCCACAAGTTCCTCGACCCAGCC
GCGCCTATGCCACAGGTTCAGGCTGAAGGGAAGGCAGCCGAACCGCGTGC
GCGGAAGAAGGCTAGGCCCGGCCACGCGGCCGCGACGATCTCCTCGACGC
AGCTGCAGGCGTAACGCCAAGCCCAAGGCCGAAAGCGTTAGGGTTAGCCT
ACAAGTACTTGTACGCTCAGCCGTCTTGTCTCCATGGAACAGCTTTTCGT
TCTTTTTCTTTTTTGTTTCCTCTCTGTTTTTTTTTTTTTCAACTGCGAGT
CGTATTGTACTCTGCAACCGCAGTACGGTTTATTGCCTCTGTCGAAAGCT
CATCTGACTCTTGTTGCGTTGTCCTCTCTTATTTTTATCCTTTTTCGTTT
TTTTCTTTCTCGAGGAGGTTACACTTTAGGTAGGGTAGCAAGGGATGTGG
GGTAGACTGTAGGTACGGTCGATGTTTTGTCGGTCACTTCTGGTGACATG
TCGTATTGTCCACGTATAAAATTATGAGGGGGGGGGTAGGTATATCCGGG
AGGTCTTTTCGTCTTGACATCGAGATTTCAGGTTTGATTGCAGCTTGTCG
TTATCATTGTCTTCGTTAGCCGTTACAGAGGTTTGTCCTGTCGTTCCCAA
ACCAGTTCCTTTTTGCAAGGTCGACGTCACTGCTCGTTTGTGGTCATGTT
TGGCCTCAAATATTGGCTGGGCGCCCAGTGCCTGGAACTGTGGGTCCTTT
CGATTCGTTTGCGTTGCCCATAGGCAAGTGTTGTTGCCACTAGGGCATGG
GTGCCGTTTACGAAACCCAGTTTGACCTGGTCAGTTCGAGCACGGTACGC
ACGTGGTTGTGGTGGTGTAAGTGGCTCCATGTATCGGGCAACTGCTTTTG
CTGTGACTTGGTACCGCTCTTTCCTGTTTGCAGGAGGGTTCGTTCGTAGA
CCTGTCCTGTCCTGTAGTCATCCTTGTCATAACTTGTTGCCCGCAGGGTG
TTGGTCTGAGTGCAGTTGCACGTCGCTTTGTCGGTGTTTGGTTTTTCGAA
CTCGGACATGTCGATCTGTCTACACTTCGGTTGCCCTGCTTCGTTTGTGT
CGTGCAGCTGCGTGCACCACCGAGAATGTTTTTCGGGCGTGTTGCTCTAT
GGTTTGGTTTGCGTTGCTGTTTTTGATTTTAGTCTTGTTTTTTTCAAGTA
CCTGTGTCCTTTTGGGTTAACAACCCGTTTGTCTTGCTATTCTCGTTCGT
GGAAGGGCACGTATGTAGGTTGTCGGCATTTTGTTTCGTTTGATCGCTTG
TTCTTGTAGCACATGCCGTCGTTCTTCTAGCATATGGGTAACTGTTGCCA
ATTTCCGTTGGAATAAATGGTTCCGATTTCGTCCGAGAGGTGGCATATGG
GGGGGCGATTTGGTGCCTTAGTAAGATTCTTCTCCGTAGGG back to topCoding sequence (CDS) from alignment at Scaffold_347:186814..191254+ >EsuBft2347_4a-0001 ID=EsuBft2347_4a-0001|Name=EsuBft2347_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=450bp|location=Sequence derived from alignment at Scaffold_347:186814..191254+ (Ectocarpus subulatus male Bft15b)
ATGTTTGACGATATCAGGACGAGCAAAGAAAAAGCGGAGAAGGACTCCGA
GGGGAAGACCGGGGAGGGCGAGAAGGACGCTGAGGTGTTCGACGAGGAGA
ACGAGGAGGGTCCGAGGCAAGATTGCGAATTGCTCAAGGCTATGGCATGG
CGTGAGGCCGGGATGGCGTCGAAGAAGAAGGACACAGGCCCGTCGAAGGA
GCACATGGCGCAGGGACTGGCGTTGCGTGACAGTGCCCGCGACGGTTTGC
CAGGCCGAGGTGCGACACAGGGTTTCCCGGTGGTACAACCGGCAGGTGGC
AGAGGCAAGGGCGGCAGCAGCAACTCCAAGTCCCGTTACTCTGCGGCCGC
TGCGGCGAACATCCGGTCCCGGGGGGAGGACTGTCGGTTCCGACGGGAAT
CAGAGACCTCTGACGGCGAAGGTCCTTTCGTTGGCAACCGCACCCGGTGA back to top
|