Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2263_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 124 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2263_4a-0001 ID=EsuBft2263_4a-0001|Name=EsuBft2263_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1246bp|location=Sequence derived from alignment at Scaffold_548:15268..17147- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCCGCCGCCGCCGCCGCCACAGCTATTGATGGCGCCGCAGGGCGCAGCTG
GCGGGGCGGTGTTACACCCGCAGCAGATCGAGCAGGTACGTCAGCCACTC
CCGCCGCTGCCGTTGCCTGTGCAGCAGAGACGGCAGGTGGCATCGTCGGT
GACGCCCTGACCGGCCATGGTTTACATCTGGTTTTGCAGCATGGCGTACC
GCATGGCTCAGGGACAGGCGGTCATGAGGAGGAAGGCAACGGGGGGGACG
GGGAGGCAAAGGATACCTCCAGCGGAAAGCCCGTCCCTGTCATCGTGCCT
GCTAATGCTACGTTAGCGAAGTGCAGCTGGTGCTGTTCGAAAAGCAAGAC
AGTTACTTCGATTTGTCGTGGGTGTCTCAAACGATGGCATTGCCACGTTG
ACCATGGGCTGATCGACCTCACCAAGGATCGCTTCATTTGCTGCTTCTGC
GATACCAAGACGAAGTCGGCATGTCTGTGTCACGCGTGAGTACCCCATTT
CTTTTTCCGCTGTTCAGTTTCTTTGTTCAATTGCAATCCTCTTTTAATTA
TGCGATCAAGAGTGATGTGCCAGATCGAGATCTCGGAAGCTTCTCACGCA
CGTGGGTTTCACCCGATTCGATGCCACCCATATGTGGTTTTTTTTACAGG
AATATGCAACAATATCTTGGCTTCCACAGCGCTCTCGCAGCCTGGTAGGC
TGTCACCTGTTTTCACCTAGTTGCTCCGGGAATGTTGCTGGTGATGATCT
GTATCGACTCCAACTTTTCTGTTTGCTTGACCATCGGTGTTTGTTAGGTG
TTCACCCTCTCGCAGTGCGACCAAGACCGAAGCGTCCACAATACGACCTG
CTCTCAGCGTGCGTGCTGAACGTATACTCATTTTCCCCCCTCTTTTTTTC
CCACCATCACATGCTTCGTACTCATACAGGTGCAAGAAAAACAAAGCTGA
TAAGCGAGCGGCATCCCAACGAGCTCAAGCCGGCCACATCCACGGGAGTA
GCGTGTCCCGAGTGGTTCACCGCCAGGCTCGAACCAGCGCTTTCAAGCTC
CGTCTGCCTCTCACGGTTGCGGCGCGCAACAATAGAGATAGAGAAAAGGC
ACTGTTTTCGGTCTCCACCACCGCCCGCGGCGAACGTGTCATGGTCATCA
CCGACGTCACCGCCGAGCAACCTGGTGCGCCTGCGAGCTGCATCGTGAAC
TGCTGCGATAACCGATGCCAACACTGGGCACACGTCGAGACGGATT back to topprotein sequence of EsuBft2263_4a-0001 >EsuBft2263_4 ID=EsuBft2263_4|Name=EsuBft2263_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=49bp
MVYIWFCSMAYRMAQGQAVMRRKATGGTGRQRIPPAESPSLSSCLLMLR back to topmRNA from alignment at Scaffold_548:15268..17147- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2263_4a-0001 ID=EsuBft2263_4a-0001|Name=EsuBft2263_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1880bp|location=Sequence derived from alignment at Scaffold_548:15268..17147- (Ectocarpus subulatus male Bft15b)
GCCGCCGCCGCCGCCGCCACAGCTATTGATGGCGCCGCAGGGCGCAGCTG
GCGGGGCGGTGTTACACCCGCAGCAGATCGAGCAGGTACGTCAGCCACTC
CCGCCGCTGCCGTTGCCTGTGCAGCAGAGACGGCAGGTGGCATCGTCGGT
GACGCCCTGACCGGCCATGGTTTACATCTGGTTTTGCAGCATGGCGTACC
GCATGGCTCAGGGACAGGCGGTCATGAGGAGGAAGGCAACGGGGGGGACG
GGGAGGCAAAGGATACCTCCAGCGGAAAGCCCGTCCCTGTCATCGTGCCT
GCTAATGCTACGTTAGCGAAGTGCAGCTGGTGCTGTTCGAAAAGCAAGAC
AGTTACTTCGATTTGTCGTGGGTGTCTCAAACGATGGCATTGCCACGTTG
ACCATGGGCTGATCGACCTCACCAAGGATCGCTTCATTTGCTGCTTCTGC
GATACCAAGACGAAGTCGGCATGTCTGTGTCACGCGTGAGTACCCCATTT
CTTTTTCCGCTGTTCAGTTTCTTTGTTCAATTGCAATCCTCTTTTAATTA
TGCGATCAAGAGTGATGTGCCAGATCGAGATCTCGGAAGCTTCTCACGCA
CGTGGGTTTCACCCGATTCGATGCCACCCATATGTGGTTTTTTTTACAGG
AATATGCAACAATATCTTGGCTTCCACAGCGCTCTCGCAGCCTGGTAGGC
TGTCACCTGTTTTCACCTAGTTGCTCCGGGAATGTTGCTGGTGATGATCT
GTATCGACTCCAACTTTTCTGTTTGCTTGACCATCGGTGTTTGTTAGGTG
TTCACCCTCTCGCAGTGCGACCAAGACCGAAGCGTCCACAATACGACCTG
CTCTCAGCGTGCGTGCTGAACGTATACTCATTTTCCCCCCTCTTTTTTTC
CCACCATCACATGCTTCGTACTCATACAGGTGCAAGAAAAACAAAGCTGA
TAAGCGAGCGGCATCCCAACGAGCTCAAGCCGGCCACATCCACGGGAGTA
GCGTGTCCCGAGTGGTTCACCGCCAGGCTCGAACCAGCGCTTTCAAGCTC
CGTCTGCCTCTCACGGTTGCGGCGCGCAACAATAGAGATAGAGAAAAGGC
ACTGTTTTCGGTCTCCACCACCGCCCGCGGCGAACGTGTCATGGTCATCA
CCGACGTCACCGCCGAGCAACCTGGTGCGCCTGCGAGCTGCATCGTGAAC
TGCTGCGATAACCGATGCCAACAGTGAGTCGATGTAGTTGTTGGGAGATG
TCACGAAACAACAGTGCTTGTGTGGTGTTCGATACTCTTCCTTCTCACAG
GCAAATCTCCGATCGAAACTACATATTTTTGTTGCAACCCAACGCTTTTA
TAACTCAGTTGGAAAAGAAAAGGCATTTGCAGGGCACAGATAAGGGCCCG
GCCGTTCTGTGGTATCATTTTGTTTTTCGATAGTTGCTGCTCGGTGAGTT
ATCAGAAATTTGTCGGCACATATATATTTTTTCTGACGACCCACTGTCAC
TTGCATGGTTGCTTTGGTATGTTTTTGCAGTGTGCAAGCGGAACCCGAGC
ACGCGCCAAACGCCGAGCAGGTTGCAGCGGGCCAATGTGAGCACGCTGAC
GTCATTCTCGGAGATGGGACCACCCCGAAGGCGGATATTCCTGAAGCAGA
GCCGGTTGTCTTTGGTAAGGATGGGGAAGGGATCGAAAGCGTTGGGGATG
CAGCGATAACCCAGATGGTTTTGACTCAGGGTAGATTTGACACGATTATA
AGGATGGCAGCGAATGCAGAGGAGCATGGGGTGCCGCTGTTGATGCGCGT
AGGCGAGACCCAGACGTATGTTGTGTACCATCCGGGTCATCGGTCTATTC
CTGGCAGCTGGGCACACGTCGAGACGGATT back to topCoding sequence (CDS) from alignment at Scaffold_548:15268..17147- >EsuBft2263_4a-0001 ID=EsuBft2263_4a-0001|Name=EsuBft2263_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=150bp|location=Sequence derived from alignment at Scaffold_548:15268..17147- (Ectocarpus subulatus male Bft15b)
ATGGTTTACATCTGGTTTTGCAGCATGGCGTACCGCATGGCTCAGGGACA
GGCGGTCATGAGGAGGAAGGCAACGGGGGGGACGGGGAGGCAAAGGATAC
CTCCAGCGGAAAGCCCGTCCCTGTCATCGTGCCTGCTAATGCTACGTTAG back to top
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