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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| ProteomeId | EsuBft2248_4 |
| Protein domains | IPR001878 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 372 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0003676 |
| GO | 0008270 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2248_4a-0001 ID=EsuBft2248_4a-0001|Name=EsuBft2248_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3725bp|location=Sequence derived from alignment at Scaffold_242:404679..408450+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGAGGGGAGCGTTGGATGTTGGAGGTGTTCAGCAGGAGGAGGAGTCCGG CGGTGACGTAGGGGCATCGACAGGGGCCAGCGGTGACGCTGCCGCCCCGA ACAGCAGCCAGGGGTCCGCCGCGACGGGTACAGTGGGTGTAGGCGGCTAC GGCAGAGGGTATGGCTCCCAAGGTGAGGCAGCCGCAACCGGCGGTGGCGT TGGTGGTGTTTTCGTCAGCGGTGATGTCGTTGGTGAGGGTCTCTTCACGG GAGGCGGCGGAATTTCGAAACTCGCCGTGTCTCACGTAAACCCACCACAG CTCAAGAAAGGGGCCGAGCAGCACCCGGGGTGGAGACAGGATATGATCGT GCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGTGC TGCCGGACATCAACAAGCCACAGACCNGTCTGGCGTGGAATTTCCTATCT GCCGCGTTGACTACTGAGACGGACAAATCCATCCTCCGTCGTTGCACGAA CCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTGCCGGAGACAN GTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGT GCTGCCGGACATCAAACAGCCACAGACCGCCCTTCTCGAGCAGGGGTTTT CGTACGCAGCAATCCGCAAGACGTNNNNNNNNNNNNNNNGGCAACTAGAT GCGGCATACCTGCCGGAGACACAGGGTGCACAGCAGCAGCTTTTCAGAGA GTTCCAGCAGTACCAGACTCCTCGGAAGGAGAACCCCGTCGCCAGTTTGA ACAAGCTCATGGGTATGGCCAACATGATGCGGCAAGGGGGCGGAGCCACG GTAAACGACCAGTTCGTGTTCGCCCGACTTATCGATTCGCTGCCCAACCC CGAATACGAAGTCACCAAGCAAACCTTGTCGGTGGTCCAACCGCTGACGA GGGCCTTGTACAACAGCTCTCAACGCGATTTAACCTTCTCACCGAGGAAT GGAGGAAGGAAGGAGGAAAAGGATCCAGGGGGGAGCAGGCGTACATTGCG GGTGACGGCACCGGGAAGGGGCGGCAGGCTGGCGGCGGCTGCGGCAGGAA GAGCAACGGCCGTGGCAGCAAGAAGAAGGCGGGGACGGACGAGCGGGTCG ACCACCGGAGGTGTTTCCGATGCAACCACCGCGGGCATAGGAAGCCCGAC TGCACCACGAAGGAGGAGGACTTCCTGGAGCAGTGCGACACGTGTTTGGG CTTTGGGCACAACAGCGAGAAGTGTGCGACACCCACGGAGGAAGCGTGCA TGGCGGTAGTGGAGCATGCCGCGGTGGTGAGTTTCGAAGAGCAGTACGAC CGCGCGGAGGAACTGTGCAAGATGGATCCTAGTTGGGAGAAGCTGACCGA AGACGAGAAGGAAGCAAAGGTGCAGGAAGTGATAACTGAAAGTTTCTAGG GTGGACAGGTGGTGTTGCTAATACGGTACGGCAGGTTGGCCGTAGGCCCT CAGCGCCGCTGATTTGCGGTGGGGGGGGCGGACGAAGTCGTGCGGAGGTG GCGCGCATGCACAGCATGGACAGATGGGCCATAAAAGTCGCACAATTGAC GGTGCGCACTCCATCTGCGGGATAGGAGGCGGTGGAAAGCAGGGACGGTA GAGTGACCGTTGGGCAGAATAGCCGGAGACACCCTACCATGGATTGACCG CGCGACGTGTGGGGGGTGGGCGCCGCACTCGCTTGACGCGGGCGGCGTTT TTCTCGAAGTTGATCACAGGCACGGCAGAGTGGCCGTGCACGCCCTACCA CGGTTGACACGCGCGACGGCGCGTCGGGGGGTGGGTGCCGCATCACGCGT GAAGCGGGCGGCATTTTTCAACCACAGCACGGACGGAGGGGCCGTGGCTG TCCTGCCTTGCCGTTTGGAGCCGGGGGGGTAGCACTTGAAGTCGCGCGGA GATGACGCGCAACCCAGCACGGACGGACGGGCCGTGGCTGTTCTGCCTCG TCGTTGGAGCGGGGGGGGGCAGCATGTTTTGTCGCGCGGAGGTGGCGCGC AACCATCAGCCGGAGGTGGGCATTTGGGGTGGGGCACAGCGATATGGCGG TGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGC GCGCTTCATCTTCACGATTGGAACTGGTGGAGTGGACGGGCAAGCTTGAT AATTTTTTCTCGTGTCTTTCTTTTTTCGACGCCAGTTTACGGGTGTCGGT GAAATCCGAATTTTTCAAGCGTTCTTGATCTTGTTTCGTTTTTTGTTGTC GTTTCTTTTGACGGTAAGTTTTTTTGGTTGCCGAATCCAGTGGTAATTCT CACGTATACGTGTTGTGGTTATACATCGTGATGTACGCTTTGCGCTTCTT GACCATTTTTTGTTGTGTCGAGGGCTCATATCGGTGACAGGTGTGTCGGT GATGGTAGCAAAGTGGGGGGGGATGAAAACGTGCACGTTGGTAGAATTTG CCACCATATTTGATGCGTAGTTCATGAAGGTTCAATCGCAAGTTGATGCA TTCTTGGTTGAAGGAAGATCGAGGTTTTTGACTGTTTGCAGATTGCGGGC CTTGTTTGAAGGAGGCTTGACGTTTTGTTTCTGAAGATGGGTTTCGTGGA AAACCGGTTGTGTTTGATTTGTTCTTCAGCAGAAACAGGATGTTTGTGGT TTTGATTTGGTGGTGGATCGCGCTTGGTTGATCCCAAAAGAGGGGGAACG TACCTGTCTGATGAAGTATTGATGCGGAATGCAGTTAGGCAGAGAGGGCG TTGCCCGTACATGGGTGTGATACACGAATCAATGTTGGTGCTGCACAAGG ATCTTGTTTCATCATTCAAGAAGGATTTTGCCAGGAGCGCACCTCGTGGT TGGAGAGTAGAGCGTTGCTTAGAAAATCGTAATCCGCATGTTTGGTGTGT GTCGGTGATGGTAGCAAAGTGGGGGGGGATGAAAACGTGCACGTTGGTAG AATTTGCCACCATATTTGATGCGTAGTTCATGAAGGTTCAATCGCATGTT GATGCATTCTTGGTTGAAGGAAGATCGAGGGTTTTGACTGTTTGCGGATT GCGGGCCTTGTTTGAAGGAGGCTTGACGTTTTGTTTCTGAAGATGGGTTT CGTGGAAAACCGGTTGTGTTTGATTTGTTCTTCAGCAGAAACAGGATGTT TGTGGTTTTGATTTGGTGGTGGATCGCGCTTGGTTGATCCCAAAAGAGGG AGAACGTACCTGTCTGATGAAGTTTTGATGCGGAATGCAGTTAGGCAGGG AGGGCGTTGCCCGTACATGTGTGTGATACACGAATCAGTGTTGGTGCTGC ACAAGGATCTTGTTTCATCATTCAAGAAGGATTTTGCCAGGAGCGCACCT CGTGGTTGGAGAGTAGAGCGTTGCTTAGAAAATCGTAATCCGCATGTTTG GTGTAAGTCGCTTTTGTTTTGATCTTGCAGTGCAGCCGTTGGAATCATAG ATGACATGGACGGTTCGTTTGTTTTTTATTGAGGCGTTGGACTTCGAGGG GTTTTGATCCGGCGGCCGGGTTTCCCCTTGGTTTTATTTTCTTCGTTGTG TTTCAGCTATTTTGGCATAGTTCCGACGCACGAGTGGTTCTTCGATGGTG CAAAGAACCAGGGAGGGTGTTCGTA back to topprotein sequence of EsuBft2248_4a-0001 >EsuBft2248_4 ID=EsuBft2248_4|Name=EsuBft2248_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=482bp
MRGALDVGGVQQEEESGGDVGASTGASGDAAAPNSSQGSAATGTVGVGGY GRGYGSQGEAAATGGGVGGVFVSGDVVGEGLFTGGGGISKLAVSHVNPPQ LKKGAEQHPGWRQDMIVQAGILDIGDVFSGGGVLPDINKPQTXLAWNFLS AALTTETDKSILRRCTNPREALRQLDAAYLPETXAGRHSRHRRCVLRRRG AAGHQTATDRPSRAGVFVRSNPQDVXXXXXATRCGIPAGDTGCTAAAFQR VPAVPDSSEGEPRRQFEQAHGYGQHDAARGRSHGKRPVRVRPTYRFAAQP RIRSHQANLVGGPTADEGLVQQLSTRFNLLTEEWRKEGGKGSRGEQAYIA GDGTGKGRQAGGGCGRKSNGRGSKKKAGTDERVDHRRCFRCNHRGHRKPD CTTKEEDFLEQCDTCLGFGHNSEKCATPTEEACMAVVEHAAVVSFEEQYD RAEELCKMDPSWEKLTEDEKEAKVQEVITESF back to topmRNA from alignment at Scaffold_242:404679..408450+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2248_4a-0001 ID=EsuBft2248_4a-0001|Name=EsuBft2248_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3772bp|location=Sequence derived from alignment at Scaffold_242:404679..408450+ (Ectocarpus subulatus male Bft15b) ATGAGGGGAGCGTTGGATGTTGGAGGTGTTCAGCAGGAGGAGGAGTCCGG
CGGTGACGTAGGGGCATCGACAGGGGCCAGCGGTGACGCTGCCGCCCCGA
ACAGCAGCCAGGGGTCCGCCGCGACGGGTACAGTGGGTGTAGGCGGCTAC
GGCAGAGGGTATGGCTCCCAAGGTGAGGCAGCCGCAACCGGCGGTGGCGT
TGGTGGTGTTTTCGTCAGCGGTGATGTCGTTGGTGAGGGTCTCTTCACGG
GAGGCGGCGGAATTTCGAAACTCGCCGTGTCTCACGTAAACCCACCACAG
CTCAAGAAAGGGGCCGAGCAGCACCCGGGGTGGAGACAGGATATGATCGT
GCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGTGC
TGCCGGACATCAACAAGCCACAGACCNGTCTGGCGTGGAATTTCCTATCT
GCCGCGTTGACTACTGAGACGGACAAATCCATCCTCCGTCGTTGCACGAA
CCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTGCCGGAGACAN
GTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGT
GCTGCCGGACATCAAACAGCCACAGACCGCCCTTCTCGAGCAGGGGTTTT
CGTACGCAGCAATCCGCAAGACGTNNNNNNNNNNNNNNNGGCAACTAGAT
GCGGCATACCTGCCGGAGACACAGGGTGCACAGCAGCAGCTTTTCAGAGA
GTTCCAGCAGTACCAGACTCCTCGGAAGGAGAACCCCGTCGCCAGTTTGA
ACAAGCTCATGGGTATGGCCAACATGATGCGGCAAGGGGGCGGAGCCACG
GTAAACGACCAGTTCGTGTTCGCCCGACTTATCGATTCGCTGCCCAACCC
CGAATACGAAGTCACCAAGCAAACCTTGTCGGTGGTCCAACCGCTGACGA
GGGCCTTGTACAACAGCTCTCAACGCGATTTAACCTTCTCACCGAGGAAT
GGAGGAAGGAAGGAGGAAAAGGATCCAGGGGGGAGCAGGCGTACATTGCG
GGTGACGGCACCGGGAAGGGGCGGCAGGCTGGCGGCGGCTGCGGCAGGAA
GAGCAACGGCCGTGGCAGCAAGAAGAAGGCGGGGACGGACGAGCGGGTCG
ACCACCGGAGGTGTTTCCGATGCAACCACCGCGGGCATAGGAAGCCCGAC
TGCACCACGAAGGAGGAGGACTTCCTGGAGCAGTGCGACACGTGTTTGGG
CTTTGGGCACAACAGCGAGAAGTGTGCGACACCCACGGAGGAAGCGTGCA
TGGCGGTAGTGGAGCATGCCGCGGTGGTGAGTTTCGAAGAGCAGTACGAC
CGCGCGGAGGAACTGTGCAAGATGGATCCTAGTTGGGAGAAGCTGACCGA
AGACGAGAAGGAAGCAAAGGTGCAGGAAGTGATAACTGAAAGTTTCTAGG
GTGGACAGGTGGTGTTGCTAATACGGTACGGCAGGTTGGCCGTAGGCCCT
CAGCGCCGCTGATTTGCGGTGGGGGGGGCGGACGAAGTCGTGCGGAGGTG
GCGCGCATGCACAGCATGGACAGATGGGCCATAAAAGTCGCACAATTGAC
GGTGCGCACTCCATCTGCGGGATAGGAGGCGGTGGAAAGCAGGGACGGTA
GAGTGACCGTTGGGCAGAATAGCCGGAGACACCCTACCATGGATTGACCG
CGCGACGTGTGGGGGGTGGGCGCCGCACTCGCTTGACGCGGGCGGCGTTT
TTCTCGAAGTTGATCACAGGCACGGCAGAGTGGCCGTGCACGCCCTACCA
CGGTTGACACGCGCGACGGCGCGTCGGGGGGTGGGTGCCGCATCACGCGT
GAAGCGGGCGGCATTTTTCAACCACAGCACGGACGGAGGGGCCGTGGCTG
TCCTGCCTTGCCGTTTGGAGCCGGGGGGGTAGCACTTGAAGTCGCGCGGA
GATGACGCGCAACCCAGCACGGACGGACGGGCCGTGGCTGTTCTGCCTCG
TCGTTGGAGCGGGGGGGGGCAGCATGTTTTGTCGCGCGGAGGTGGCGCGC
AACCATCAGCCGGAGGTGGGCATTTGGGGTGGGGCACAGCGATATGGCGG
TGTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGC
GCGCTTCATCTTCACGATTGGAACTGGTGGAGTGGACGGGCAAGCTTGAT
AATTTTTTCTCGTGTCTTTCTTTTTTCGACGCCAGTTTACGGGTGTCGGT
GAAATCCGAATTTTTCAAGCGTTCTTGATCTTGTTTCGTTTTTTGTTGTC
GTTTCTTTTGACGGTAAGTTTTTTTGGTTGCCGAATCCAGTGGTAATTCT
CACGTATACGTGTTGTGGTTATACATCGTGATGTACGCTTTGCGCTTCTT
GACCATTTTTTGTTGTGTCGAGGGCTCATATCGGTGACAGGTGTGTCGGT
GATGGTAGCAAAGTGGGGGGGGATGAAAACGTGCACGTTGGTAGAATTTG
CCACCATATTTGATGCGTAGTTCATGAAGGTTCAATCGCAAGTTGATGCA
TTCTTGGTTGAAGGAAGATCGAGGTTTTTGACTGTTTGCAGATTGCGGGC
CTTGTTTGAAGGAGGCTTGACGTTTTGTTTCTGAAGATGGGTTTCGTGGA
AAACCGGTTGTGTTTGATTTGTTCTTCAGCAGAAACAGGATGTTTGTGGT
TTTGATTTGGTGGTGGATCGCGCTTGGTTGATCCCAAAAGAGGGGGAACG
TACCTGTCTGATGAAGTATTGATGCGGAATGCAGTTAGGCAGAGAGGGCG
TTGCCCGTACATGGGTGTGATACACGAATCAATGTTGGTGCTGCACAAGG
ATCTTGTTTCATCATTCAAGAAGGATTTTGCCAGGAGCGCACCTCGTGGT
TGGAGAGTAGAGCGTTGCTTAGAAAATCGTAATCCGCATGTTTGGTGTAA
GTCGCTTTTGTTTTGATCTNTCGAGGGCTCATATCGGTGACAGGTGTGTC
GGTGATGGTAGCAAAGTGGGGGGGGATGAAAACGTGCACGTTGGTAGAAT
TTGCCACCATATTTGATGCGTAGTTCATGAAGGTTCAATCGCATGTTGAT
GCATTCTTGGTTGAAGGAAGATCGAGGGTTTTGACTGTTTGCGGATTGCG
GGCCTTGTTTGAAGGAGGCTTGACGTTTTGTTTCTGAAGATGGGTTTCGT
GGAAAACCGGTTGTGTTTGATTTGTTCTTCAGCAGAAACAGGATGTTTGT
GGTTTTGATTTGGTGGTGGATCGCGCTTGGTTGATCCCAAAAGAGGGAGA
ACGTACCTGTCTGATGAAGTTTTGATGCGGAATGCAGTTAGGCAGGGAGG
GCGTTGCCCGTACATGTGTGTGATACACGAATCAGTGTTGGTGCTGCACA
AGGATCTTGTTTCATCATTCAAGAAGGATTTTGCCAGGAGCGCACCTCGT
GGTTGGAGAGTAGAGCGTTGCTTAGAAAATCGTAATCCGCATGTTTGGTG
TAAGTCGCTTTTGTTTTGATCTTGCAGTGCAGCCGTTGGAATCATAGATG
ACATGGACGGTTCGTTTGTTTTTTATTGAGGCGTTGGACTTCGAGGGGTT
TTGATCCGGCGGCCGGGTTTCCCCTTGGTTTTATTTTCTTCGTTGTGTTT
CAGCTATTTTGGCATAGTTCCGACGCACGAGTGGTTCTTCGATGGTGCAA
AGAACCAGGGAGGGTGTTCGTA back to topCoding sequence (CDS) from alignment at Scaffold_242:404679..408450+ >EsuBft2248_4a-0001 ID=EsuBft2248_4a-0001|Name=EsuBft2248_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1449bp|location=Sequence derived from alignment at Scaffold_242:404679..408450+ (Ectocarpus subulatus male Bft15b) ATGAGGGGAGCGTTGGATGTTGGAGGTGTTCAGCAGGAGGAGGAGTCCGG CGGTGACGTAGGGGCATCGACAGGGGCCAGCGGTGACGCTGCCGCCCCGA ACAGCAGCCAGGGGTCCGCCGCGACGGGTACAGTGGGTGTAGGCGGCTAC GGCAGAGGGTATGGCTCCCAAGGTGAGGCAGCCGCAACCGGCGGTGGCGT TGGTGGTGTTTTCGTCAGCGGTGATGTCGTTGGTGAGGGTCTCTTCACGG GAGGCGGCGGAATTTCGAAACTCGCCGTGTCTCACGTAAACCCACCACAG CTCAAGAAAGGGGCCGAGCAGCACCCGGGGTGGAGACAGGATATGATCGT GCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGTGC TGCCGGACATCAACAAGCCACAGACCNGTCTGGCGTGGAATTTCCTATCT GCCGCGTTGACTACTGAGACGGACAAATCCATCCTCCGTCGTTGCACGAA CCCAAGGGAAGCCCTGCGGCAACTAGATGCGGCATACCTGCCGGAGACAN GTGCAGGCAGGCATTCTCGACATAGGCGATGTGTTCTCCGGCGGCGGGGT GCTGCCGGACATCAAACAGCCACAGACCGCCCTTCTCGAGCAGGGGTTTT CGTACGCAGCAATCCGCAAGACGTNNNNNNNNNNNNNNNGGCAACTAGAT GCGGCATACCTGCCGGAGACACAGGGTGCACAGCAGCAGCTTTTCAGAGA GTTCCAGCAGTACCAGACTCCTCGGAAGGAGAACCCCGTCGCCAGTTTGA ACAAGCTCATGGGTATGGCCAACATGATGCGGCAAGGGGGCGGAGCCACG GTAAACGACCAGTTCGTGTTCGCCCGACTTATCGATTCGCTGCCCAACCC CGAATACGAAGTCACCAAGCAAACCTTGTCGGTGGTCCAACCGCTGACGA GGGCCTTGTACAACAGCTCTCAACGCGATTTAACCTTCTCACCGAGGAAT GGAGGAAGGAAGGAGGAAAAGGATCCAGGGGGGAGCAGGCGTACATTGCG GGTGACGGCACCGGGAAGGGGCGGCAGGCTGGCGGCGGCTGCGGCAGGAA GAGCAACGGCCGTGGCAGCAAGAAGAAGGCGGGGACGGACGAGCGGGTCG ACCACCGGAGGTGTTTCCGATGCAACCACCGCGGGCATAGGAAGCCCGAC TGCACCACGAAGGAGGAGGACTTCCTGGAGCAGTGCGACACGTGTTTGGG CTTTGGGCACAACAGCGAGAAGTGTGCGACACCCACGGAGGAAGCGTGCA TGGCGGTAGTGGAGCATGCCGCGGTGGTGAGTTTCGAAGAGCAGTACGAC CGCGCGGAGGAACTGTGCAAGATGGATCCTAGTTGGGAGAAGCTGACCGA AGACGAGAAGGAAGCAAAGGTGCAGGAAGTGATAACTGAAAGTTTCTAG back to top
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