Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2235_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 113 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2235_5a-0001 ID=EsuBft2235_5a-0001|Name=EsuBft2235_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1135bp|location=Sequence derived from alignment at Scaffold_228:69057..70835- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACAGAGGTGCAGGAGATGATTGGCATGCTCCCATCGCTACTGCAGGC
CGAGTCGGAAGGGCAAGACCAGGAGGGGTCGGCGGCGCTGCAAGAGGGCG
CCGCGGGTGCGGCGGAATTGGGGGTTCCGCCGAGCAGCCACCGAGAGCTG
TATCCTGCGGTGGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAG
GCGCAACAAGTGTTTTGTTTACCTGAGTTGTTGCAGAACAAGGGAGGGTG
GAAACGGGCGTGTTTCTTTTGAGAATGTTACGCTTGAAGAGTACGCCCGG
TCTTGGTATTATGCAACTTGACAGGTTGGTGTGTCGGGCAGGTTGTATAT
TTCTCAAAAGCGGGTATCCTTTGGAGAATCGAGTTTGATTGGTTTTTCAG
TTGGAAACAGGTCACGATTTTGAGTTCGTGTGGGATTGCAGATGGTTGAA
CCGAAGGCAGGGAGAACGTACCTGTTCGATGCAGTTTTCGTGTGGAATGC
AGATAGACAGGGAGGGCGTTGCCTGTATGTGTGTGACACCTGAAGAGTCA
GTTGGTGCTGCACAGCAAGGAGTTCGTTCCATCATGTCGGGAGGATTTGT
CAGAGGCGTTGCTCGAGGTAGTAGAGCGTTGCCTAGAATTTGTAATCCGA
GCGTCTGGAGTGGTTTTATCTTTGTCTTCTTGCAGTACGGCCGTTGGAAG
CATCGGTGATATGGACGGCTATTGGAATTTGTTTGAGCCGTTGGAATCTT
TCGTGATATGATCGGCGTGAGGCGTTAAATTTTCTGAGGGGTTTTGATCC
GGTGGCCGGGTTTCCCCTTTCCTTTGGGTTGTCGTCGTGTTTCGGTTTTT
CGGACGTATTTTCGACGCACTAGAGGTTCTTCACTGGCGTAAAGAACCAG
GGAGGGTGTTCGTGCGTACAAGTAGATCGTCGAAAAGTAGCCGTTACGTA
GGACGCAGCTGGGACAACTTGAAGGGGTATGTGCTGAGAGGCTTTGGATG
ATAGTGCGGAGTCCCCGTGTTCTCTCGAGAATTGGGGCCTCTCATCCTTC
TCCCTCTCTCCTCTCTCATGCGAGCTAATACACACAGTTCAATAGCAGCC
CCAAGTCCGCCGGCCCTTAACAGGGCTAGGGCTCA back to topprotein sequence of EsuBft2235_5a-0001 >EsuBft2235_5 ID=EsuBft2235_5|Name=EsuBft2235_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=66bp
MTEVQEMIGMLPSLLQAESEGQDQEGSAALQEGAAGAAELGVPPSSHREL
YPAVVVXXXXXXXXXX back to topmRNA from alignment at Scaffold_228:69057..70835- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2235_5a-0001 ID=EsuBft2235_5a-0001|Name=EsuBft2235_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1779bp|location=Sequence derived from alignment at Scaffold_228:69057..70835- (Ectocarpus subulatus male Bft15b)
ATGACAGAGGTGCAGGAGATGATTGGCATGCTCCCATCGCTACTGCAGGC
CGAGTCGGAAGGGCAAGACCAGGAGGGGTCGGCGGCGCTGCAAGAGGGCG
CCGCGGGTGCGGCGGAATTGGGGGTTCCGCCGAGCAGCCACCGAGAGCTG
TATCCTGCGGTGGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAG
GCGCAACAAGTGTTTTGTTTACCTGAGTTGTTGCAGAACAAGGGAGGGTG
GAAACGGGCGTGTTTCTTTTGAGAATGTTACGCTTGAAGAGTACGCCCGG
TCTTGGTATTATGCAACTTGACAGGTTGGTGTGTCGGGCAGGTATGCAGT
TGTTTGTGGAAGTCGATTTGTTTTCACGTACGGAAGCATGTTGGTTGTGT
CTGTTTTGGGAAGCGACATCTAGGTGATGGCCATGTGCGTGTTCCTCTGG
GCGCCGGTGTTGCGCAAGGGAGGGCACTAGGCTTAGGTTCCTGGTGTGCT
TGTCTATAATGCAGACAGCGTAGATGCTTGGGGTTCGTAGTACAGCGTTA
CCAAGTTGTGGGGGGGCGTTTGTGTTTTTCGTAGTTGTGCTTGAAGGTTC
AGTAGAAAGTTGATGTATCCTTGATTGAAGGAGAACTGAGGATTGATTTG
GTAGTATGCAGATGGTGGACCTTGTTTGAAGCAGGCTACATTCGGCAGGT
TGTATATTTCTCAAAAGCGGGTATCCTTTGGAGAATCGAGTTTGATTGGT
TTTTCAGTTGGAAACAGGTCACGATTTTGAGTTCGTGTGGGATTGCAGAT
GGTTGAACCGAAGGCAGGGAGAACGTACCTGTTCGATGCAGTTTTCGTGT
GGAATGCAGATAGACAGGGAGGGCGTTGCCTGTATGTGTGTGACACCTGA
AGAGTCAGTTGGTGCTGCACAGCAAGGAGTTCGTTCCATCATGTCGGGAG
GATTTGTCAGAGGCGTTGCTCGAGGTAGTAGAGCGTTGCCTAGAATTTGT
AATCCGAGCGTCTGGAGTGGTTTTATCTTTGTCTTCTTGCAGTACGGCCG
TTGGAAGCATCGGTGATATGGACGGCTATTGGAATTTGTTTGAGCCGTTG
GAATCTTTCGTGATATGATCGGCGTGAGGCGTTAAATTTTCTGAGGGGTT
TTGATCCGGTGGCCGGGTTTCCCCTTTCCTTTGGGTTGTCGTCGTGTTTC
GGTTTTTCGGACGTATTTTCGACGCACTAGAGGTTCTTCACTGGCGTAAA
GAACCAGGGAGGGTGTTCGTGCGTACAAGTAGATCGTCGAAAAGTAGCCG
TTACGTAGGACGCAGCTGGGACAACTTGAAGGGTATGTGCTGAGAGGCTT
TGGATGATAGTGCGGAGTCCCCGTGTTCTCTCGAGAATTGGGGCCCTCTC
CTCCTTCTCCCTCTCTCCTCTCTCATGCGAGCTAATACACANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNAACTTGAAGGGTATGTGCTGAGAGGCTTTGGATGATAGTG
CGGAGTCCCCGTGTTCTCTCGAGAATTGGGGCCTCTCATCCTTCTCCCTC
TCTCCTCTCTCATGCGAGCTAATACACACAGTTCAATAGCAGCCCCAAGT
CCGCCGGCCCTTAACAGGGCTAGGGCTCA back to topCoding sequence (CDS) from alignment at Scaffold_228:69057..70835- >EsuBft2235_5a-0001 ID=EsuBft2235_5a-0001|Name=EsuBft2235_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=198bp|location=Sequence derived from alignment at Scaffold_228:69057..70835- (Ectocarpus subulatus male Bft15b)
ATGACAGAGGTGCAGGAGATGATTGGCATGCTCCCATCGCTACTGCAGGC
CGAGTCGGAAGGGCAAGACCAGGAGGGGTCGGCGGCGCTGCAAGAGGGCG
CCGCGGGTGCGGCGGAATTGGGGGTTCCGCCGAGCAGCCACCGAGAGCTG
TATCCTGCGGTGGTCGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG back to top
|