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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D7G8H0 |
| ProteomeId | EsuBft2227_3 |
| Protein domains | PF13561 |
| Protein domains | SSF51735 |
| Protein domains | IPR016040 |
| Protein domains | PTHR24311 |
| Protein domains | IPR002347 |
| Protein domains | SignalP-TM |
| Protein domains | IPR002198 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | d-erythrulose reductase os:gallus gallus gn:der pe:1 sv:1 [Automatic annotation] |
| Nb exon | 7 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1963 |
| Hectar predicted targeting category | other localisation |
| Evalue | 6.68e-163 |
| EggNOG OGs | KOG1207@1|root,KOG1207@2759|Eukaryota |
| Ec32 ortholog description | NAD(P)-binding domain |
| Ec32 ortholog | Ec-14_002990.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Preferred name | DCXR |
| KEGG rclass | RC00102,RC00154,RC01491 |
| KEGG ko | ko:K00081,ko:K03331 |
| KEGG Reaction | R01904,R02581,R09420 |
| KEGG Pathway | ko00040,ko00590,ko00980,ko01100,map00040,map00590,map00980,map01100 |
| KEGG Module | M00014 |
| GOs | GO:0003674,GO:0003824,GO:0004090,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0005874,GO:0005881,GO:0005886,GO:0005902,GO:0005903,GO:0005975,GO:0005996,GO:0005997,GO:0005998,GO:0006006,GO:0006063,GO:0006064,GO:0006082,GO:0006116,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009987,GO:0015630,GO:0016020,GO:0016043,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016651,GO:0016655,GO:0019318,GO:0019321,GO:0019323,GO:0019362,GO:0019585,GO:0019637,GO:0019640,GO:0019674,GO:0019752,GO:0022607,GO:0032787,GO:0034641,GO:0042802,GO:0042995,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0043621,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0046365,GO:0046395,GO:0046483,GO:0046496,GO:0050038,GO:0051167,GO:0051186,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0072329,GO:0072524,GO:0090407,GO:0098858,GO:0098862,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:1901135,GO:1901137,GO:1901159,GO:1901360,GO:1901564,GO:1901575,GO:1901576 |
| EC | 1.1.1.10,1.1.1.184 |
| Description | L-xylulose reductase (NAD ) activity |
| COG category | S |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0005975 |
| GO | 0043229 |
| GO | 0016616 |
| GO | 0016020 |
| GO | 0019321 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2227_3a-0001 ID=EsuBft2227_3a-0001|Name=EsuBft2227_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1963bp|location=Sequence derived from alignment at Scaffold_510:15199..19175- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CTTTGCACTTTACACTTTGCACTTCGCACCTCGCTACCCAACTTGTGAAT TCCACATTTCAACGTTCGGTGTTGCGAAGGGACCACCACACACCGGTCCC TTTTTCAGAACAAACACTTTGTTCGTACCTAATTACCATGCACACCACGC GCTGTATGTGCAGGAGAGGAACACCGTTTCTCGCGGTTGAAGCCTGGATG GCAAGCCGCGCGAACACTGGTAGGCACCCATCCACGCGCACGGGCTGCCT CGCCTCTCCTTTTGCCGTCGTTGTTGCACGAGCTCGTGTGTCCCTGCTCC AGTCCAGCAGCCAACAAGTTCTGGATCTACCGTCAGGGGTTCATACCCCC GCCCCCGCCACCGTCGAGATAGACAGTTCGAACCCCCACGAATGCAAGCG GCGCGTGTGGAAGTTCGCCGCTGCTGTCCGTGCATACGACCACCTTCAAG AATCACCTCTCTCCGGTCGGGCTCCGATGCAGATTTTTTTGCGCGTGCCA CTTCGTGTGCTCTCAAGTCGGGGGATGGCTACTGGCCGAGCGGCCCCGGA AGAACCTCCGTTCCCGTGGAGGTGCGACATGCTAGCCGGCAAGGCGGCTA TCGTGACAGGAGGTAGCGCGGGCATTGGTGCGAGTATCACCGAGGCACTG CTCCGAGCAGGCGCTTCCGTCGCTGTTCTCGCGAGGAGTCGGTCAAAGTT CGACGGCCTTCTTCCTATTCTCGAGGAGAAGAAACTGCCGGTCGACAAGA CCCACTTCATTCCAATCGATCTGTCCAGCACGGACGACATCAGGCGAGCA GCCATCGAAGCAAATGACTGGGCGGGTGGCTGCGCGGACATCCTCGTCAA CAACGCTGGCGTGGCCACTATAGCCCCTATTCTCGAGGCCACCATCGAGG ACTGGGACTGGACCATGAACGTAAGAAGTAGGAGAGGGAATCCCATCGAG ATTTTTCGTACCGGAAACAATAGCTGTGAAGGACCCTTCCAGCGACAGAA TAGGAACCTTCACGTTCGTTCTTTGTGTGTGGGTCGTCTCGTGAAGGTGA ACGTTAGGGCGCCCTTCATCATGGCCCAGGAGTGCGCCAAGAGGATGATC GTGCGCGGCAAGGGCGGAAAGATTGTCAACACCTCAAGTACAGCGTCTCG CTTCGCACTGCACGACCACGCTGCGTACTGCACCAGCAAGGCGGCCATCA ATGGTCTCACAAACGTGAGCCGGCACAATTTCTTAACGTCCCCCCACTGG CTTCGATTGTGCTCTTTGCATCGCGCGTGTGGAGTCAAGGTGATGAGCGC GGAGTGGTCCAAGCACGACATCAACTGTAATACCATCGGCCCCACCATCG TCTTGACTGACATGGGCGCCAAAGCGTGGGGCGAGCCGGAGAAGGGCGAT CCCATGGTGGACCGCACCCCCCTCGGCCGTTTCGCGGAGCCCTGGGAGAT GGCACACGGCGTGGTGTACCTTGTCAGCCCGTCCTCCAGCCAAATGTGCG GGCAGATGCTCCTCCTCGACGGTGGCATCACCACCACCGGAACTCCCTGC GGAGTGTAACCGCCGAGAGAGCTAGCGATGCTTCGATACGACGCCAACGT CTCCTGTTGCGTGGCAGCCGTTTTTGCGCCCCGTGTTTGGCCCGCCACGA CCACGATCATCTTGCTTGTTGTTCTGTACTACTAGGAGTCGAATGTTTGT TGCCGGTGCCTTACGTGTTCGCGCCCCCCGGCATTCGGCGGGAAAAGGCG GGAGCGCGCGGGCGGAGGAGGGAGGGGGCAGTAGCGTAGAAACCGCCGGG CCGTTCTGTGCAGCCTTGTTTGATACAAATGCATAGGGTACGCGTGCATG TGTGAGTTGTATCTCATGAGTCATCCATCACATTCAATTGAAAGTAGCGA ACTCCGTTTCACCGACTCCCGGGTGGCGCAACGAGACAGGTCGGGCGGTC GAAAGCTCGCAAC back to topprotein sequence of EsuBft2227_3a-0001 >EsuBft2227_3 ID=EsuBft2227_3|Name=EsuBft2227_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=473bp
MHTTRCMCRRGTPFLAVEAWMASRANTGRHPSTRTGCLASPFAVVVARAR VSLLQSSSQQVLDLPSGVHTPAPATVEIDSSNPHECKRRVWKFAAAVRAY DHLQESPLSGRAPMQIFLRVPLRVLSSRGMATGRAAPEEPPFPWRCDMLA GKAAIVTGGSAGIGASITEALLRAGASVAVLARSRSKFDGLLPILEEKKL PVDKTHFIPIDLSSTDDIRRAAIEANDWAGGCADILVNNAGVATIAPILE ATIEDWDWTMNVRSRRGNPIEIFRTGNNSCEGPFQRQNRNLHVRSLCVGR LVKVNVRAPFIMAQECAKRMIVRGKGGKIVNTSSTASRFALHDHAAYCTS KAAINGLTNVSRHNFLTSPHWLRLCSLHRACGVKVMSAEWSKHDINCNTI GPTIVLTDMGAKAWGEPEKGDPMVDRTPLGRFAEPWEMAHGVVYLVSPSS SQMCGQMLLLDGGITTTGTPCGV back to topmRNA from alignment at Scaffold_510:15199..19175- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2227_3a-0001 ID=EsuBft2227_3a-0001|Name=EsuBft2227_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3977bp|location=Sequence derived from alignment at Scaffold_510:15199..19175- (Ectocarpus subulatus male Bft15b) CTTTGCACTTTACACTTTGCACTTCGCACCTCGCTACCCAACTTGTGAAT
TCCACATTTCAACGTTCGGTGTTGCGAAGGGACCACCACACACCGGTCCC
TTTTTCAGAACAAACACTTTGTTCGTACCTAATTACCATGCACACCACGC
GCTGTATGTGCAGGAGAGGAACACCGTTTCTCGCGGTTGAAGCCTGGATG
GCAAGCCGCGCGAACACTGGTAGGCACCCATCCACGCGCACGGGCTGCCT
CGCCTCTCCTTTTGCCGTCGTTGTTGCACGAGCTCGTGTGTCCCTGCTCC
AGTCCAGCAGCCAACAAGTTCTGGATCTACCGTCAGGGGTTCATACCCCC
GCCCCCGCCACCGTCGAGATAGACAGTTCGAACCCCCACGAATGCAAGCG
GCGCGTGTGGAAGTTCGCCGCTGCTGTCCGTGCATACGACCACCTTCAAG
AATCACCTCTCTCCGGTATAAAAGGGGAGCGGGCACATAGCTGCGTGGGG
TTGTACATAGGGGCCGGCTAGGGTTTTGGTGGCTATCTGTGGCCTTCCGC
AACATGGTCATCATAGGTCGGGCTCCGATGCAGATTTTTTTGCGCGTGCC
ACTTCGTGTGCTCTCAAGTCGGGGGATGGCTACTGGCCGAGCGGCCCCGG
AAGAACCTCCGTTCCCGTGGAGGTGCGACATGCTAGCCGGCAAGGCGGCT
ATCGTGACAGGAGGTAGCGCGGGCATTGGTGCGAGTATCACCGAGGCACT
GGTGAGAGGGGTCGTAGTAGTACAAGACTACGGTTGCCCATTTCGAAGGA
GTCATCTTATTTGAAAACAGAAGATGCAGACACGGCAGGCAGCAGAGTTT
GGCGATGATGCTGGCGAATGAGTGTGTTTTCGTTTCATCATGATGTGCGT
GTTCAACTCATCGGACACCGACAAAGCTAGGGAGCGATACGCAACGCTAC
GCTCTGGCGCGTTGGCTATCGCCGGGTAGGGCGGCACAACAAGAACGTTC
ATCGTCGTCGGCTGACTCTGTCGTGTAAATAGCGGCGCTAGACGGCGTAG
ACTAATGTAACATGCGTGACATCATTACTCGTACTGTGTCCGTCGTGTGT
AGTTAACAAAAGGGCGACCAATGAACTATCGCGACAACCGTTTGAGAGCG
TTGAAACTGTTCAAGGGTGCCCCTATGTTACGTTTCCACTATGGAAACCG
AGCATCATATGCACGCGCCCCCTTCCCATTGCTAGATGCAGAAGCTACTA
AACTGGTGTAGTGTCAGGCACACTCGGTGAGCCGGGATTTCGTCTACGTA
CACTTATTTGTTACCATTTCAACTGAACGCCATTGGTGACACCATTTTTC
GATCTACCCGTGAGCGAAGAAGTTCGAAAAGCAACGTCGCTAGCAATTGA
CTACAGTTGGTGACTTTGCCAGCTTGGTTGTGCTTGTGGTCTATGACCGA
GTGCAGAATACCCGACCATTCACACAAAAACGCGACAGGCAGTGAAGCTC
CTATTTTTCGCACGCAATATATCCCTCCTACTGCTTGCTTGCCTTTGTTT
CTGCTGTACGTCTGACCCCCTCATACGTCGCGGCTCGGCGATTTCCCCAG
CTCCGAGCAGGCGCTTCCGTCGCTGTTCTCGCGAGGAGTCGGTCAAAGTT
CGACGGCCTTCTTCCTATTCTCGAGGAGAAGAAACTGCCGGTCGACAAGA
CCCACTTCATTCCAATCGATCTGTCCAGCACGGACGACATCAGGCGAGCA
GCCATCGAAGCAAATGACTGGGCGGGTGGCTGCGCGGACATCCTCGTCAA
CAACGGTGAGCTTCACTGATTGATCGGAATGCACCAGTTGGTTGTCCTCC
AACAGGTGGTCGCTCTATGTGAATAGCATGGGAGGTGGGCTTAGCCACTG
GCCGCACTCGGATACTTGTAGCACAAAGAAAATGGAACAACTTGTCTTGC
TTGGTTTGCGGTAGATGTTAAGGTGTGGGCTGTTGGCGAGGCATAGATGG
ACCCTTCCTCGCTTGGCGTCGATATTGTGCTGTTCCACCTGCCCACAACT
GTGCTGCACTACCCTCGTCCGCGCTTTGGTGCAGCTGGCGTGGCCACTAT
AGCCCCTATTCTCGAGGCCACCATCGAGGACTGGGACTGGACCATGAACG
TAAGAAGTAGGAGAGGGAATCCCATCGAGATTTTTCGTACCGGAAACAAT
AGCTGTGAAGGACCCTTCCAGCGTGATACCTAAGGGTTGTTTACTTGTTT
TCGCCCAGAGAGCCGCAAGAACAAGCATCTAGCGCTACGATATGCCAAGA
CTGGCGGAGATGGCAAGGCTTTAGTCAGACCCTTTGTGCAGAAGGTGCAT
GCTCTACAATGGTTATCTCTTGCCCGTTCTCGAGGAAGACCCTGTTGCTT
TGTGAGACAATCTTCCCTATGACGTTCATGCCTGAATCCATACTCACGCG
GACACTGGTAGGACAGAATAGGAACCTTCACGTTCGTTCTTTGTGTGTGG
GTCGTCTCGTGAAGGTGAACGTTAGGGCGCCCTTCATCATGGCCCAGGAG
TGCGCCAAGAGGATGATCGTGCGCGGCAAGGGCGGAAAGATTGTCAACAC
CTCAAGTACAGCGTCTCGCTTCGCACTGCACGACCACGCTGCGTACTGCA
CCAGCAAGGCGGCCATCAATGGTCTCACAAACGTGAGCCGGGTATAGTGC
CAAGACAATCGAAACCGTTTCGCACAGCGCTAAGGTGTCGTATCGCACGT
GTTTGTGATACACGAGGCAGCGTGAGGCACAGGATAAACAGAGAAGCAGC
AAGCAAACGTGACGTTGAAATCATCAGCACAATTTCTTAACGTCCCCCCA
CTGGCTTCGATTGTGCTCTTTGCATCGCGCGTGTGGAGTCAAGGTGATGA
GCGCGGAGTGGTCCAAGCACGACATCAACTGTAATACCATCGGCCCCACC
ATCGTCTTGACTGACATGGGCGCCAAAGCGTGGGGGTAAGAAACCACATT
TTCCCCGTCGCCACTACCCTGGTGTAATGTGCGCAGACCAATTTTCTAGC
GGTTGCCGCCGAATGATGAATTTTCTTGAAACTGCGCAAACCATGGGGCT
GAAGCTTGATCCAGCTTCACCATTTTCTCTTGAGCGTCGTCGATCGTTCT
TGATTGAGCGCAGGTTGTGACCCGGGGAATCGATCGGCTTCGCGGCAGGG
AAGCAAAACACAGAGCCTGACGCTCTTTTGCGCACAGCAAACAAACTATT
TTGCTCGCATAGCAAGGACGCTGTTCTTGTGTTACAGAATTTAAAATGTC
GCGGAAAACCGTCGCTCCTCACCCTCATGATCCTTGTGCCCTCATCGCGC
TTGTGCGTCCCTACCAACGCCTTCCTCTTGTCCTGACCCCGACAGCGAGC
CGGAGAAGGGCGATCCCATGGTGGACCGCACCCCCCTCGGCCGTTTCGCG
GAGCCCTGGGAGATGGCACACGGCGTGGTGTACCTTGTCAGCCCGTCCTC
CAGCCAAATGTGCGGGCAGATGCTCCTCCTCGACGGTGGCATCACCACCA
CCGGAACTCCCTGCGGAGTGTAACCGCCGAGAGAGCTAGCGATGCTTCGA
TACGACGCCAACGTCTCCTGTTGCGTGGCAGCCGTTTTTGCGCCCCGTGT
TTGGCCCGCCACGACCACGATCATCTTGCTTGTTGTTCTGTACTACTAGG
AGTCGAATGTTTGTTGCCGGTGCCTTACGTGTTCGCGCCCCCCGGCATTC
GGCGGGAAAAGGCGGGAGCGCGCGGGCGGAGGAGGGAGGGGGCAGTAGCG
TAGAAACCGCCGGGCCGTTCTGTGCAGCCTTGTTTGATACAAATGCATAG
GGTACGCGTGCATGTGTGAGTTGTATCTCATGAGTCATCCATCACATTCA
ATTGAAAGTAGCGAACTCCGTTTCACCGACTCCCGGGTGGCGCAACGAGA
CAGGTCGGGCGGTCGAAAGCTCGCAAC back to topCoding sequence (CDS) from alignment at Scaffold_510:15199..19175- >EsuBft2227_3a-0001 ID=EsuBft2227_3a-0001|Name=EsuBft2227_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1422bp|location=Sequence derived from alignment at Scaffold_510:15199..19175- (Ectocarpus subulatus male Bft15b) ATGCACACCACGCGCTGTATGTGCAGGAGAGGAACACCGTTTCTCGCGGT TGAAGCCTGGATGGCAAGCCGCGCGAACACTGGTAGGCACCCATCCACGC GCACGGGCTGCCTCGCCTCTCCTTTTGCCGTCGTTGTTGCACGAGCTCGT GTGTCCCTGCTCCAGTCCAGCAGCCAACAAGTTCTGGATCTACCGTCAGG GGTTCATACCCCCGCCCCCGCCACCGTCGAGATAGACAGTTCGAACCCCC ACGAATGCAAGCGGCGCGTGTGGAAGTTCGCCGCTGCTGTCCGTGCATAC GACCACCTTCAAGAATCACCTCTCTCCGGTCGGGCTCCGATGCAGATTTT TTTGCGCGTGCCACTTCGTGTGCTCTCAAGTCGGGGGATGGCTACTGGCC GAGCGGCCCCGGAAGAACCTCCGTTCCCGTGGAGGTGCGACATGCTAGCC GGCAAGGCGGCTATCGTGACAGGAGGTAGCGCGGGCATTGGTGCGAGTAT CACCGAGGCACTGCTCCGAGCAGGCGCTTCCGTCGCTGTTCTCGCGAGGA GTCGGTCAAAGTTCGACGGCCTTCTTCCTATTCTCGAGGAGAAGAAACTG CCGGTCGACAAGACCCACTTCATTCCAATCGATCTGTCCAGCACGGACGA CATCAGGCGAGCAGCCATCGAAGCAAATGACTGGGCGGGTGGCTGCGCGG ACATCCTCGTCAACAACGCTGGCGTGGCCACTATAGCCCCTATTCTCGAG GCCACCATCGAGGACTGGGACTGGACCATGAACGTAAGAAGTAGGAGAGG GAATCCCATCGAGATTTTTCGTACCGGAAACAATAGCTGTGAAGGACCCT TCCAGCGACAGAATAGGAACCTTCACGTTCGTTCTTTGTGTGTGGGTCGT CTCGTGAAGGTGAACGTTAGGGCGCCCTTCATCATGGCCCAGGAGTGCGC CAAGAGGATGATCGTGCGCGGCAAGGGCGGAAAGATTGTCAACACCTCAA GTACAGCGTCTCGCTTCGCACTGCACGACCACGCTGCGTACTGCACCAGC AAGGCGGCCATCAATGGTCTCACAAACGTGAGCCGGCACAATTTCTTAAC GTCCCCCCACTGGCTTCGATTGTGCTCTTTGCATCGCGCGTGTGGAGTCA AGGTGATGAGCGCGGAGTGGTCCAAGCACGACATCAACTGTAATACCATC GGCCCCACCATCGTCTTGACTGACATGGGCGCCAAAGCGTGGGGCGAGCC GGAGAAGGGCGATCCCATGGTGGACCGCACCCCCCTCGGCCGTTTCGCGG AGCCCTGGGAGATGGCACACGGCGTGGTGTACCTTGTCAGCCCGTCCTCC AGCCAAATGTGCGGGCAGATGCTCCTCCTCGACGGTGGCATCACCACCAC CGGAACTCCCTGCGGAGTGTAA back to top
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