EsuBft2191_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	EsuBft2191_6a-0001
Unique Name	EsuBft2191_6a-0001
Type	mRNA
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_544:109..3041-
coding sequence from alignment at Scaffold_544:109..3041-

spliced messenger RNA

>EsuBft2191_6a-0001 ID=EsuBft2191_6a-0001|Name=EsuBft2191_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2008bp|location=Sequence derived from alignment at Scaffold_544:109..3041- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CGAAGACCAAGAATCTGGGCGAAGGAGTCGATCCCCCGTTCTCGGAGAAG
CGTTGACTACTTTGGTACGTGCGATGTGACGTTGCGTGTGGTTCCACAGC
ACAACAGAGAGCGCTAGCTGTTAGCAGACAGCTCTCAGTGCACAGTGATG
CGCATCGTTATCCATGAGGCACACGGGGGCATAGGCCAAACGGGCAAAGG
CCATGTGAAGTTGACGGGCGGGTGTGAATATGACATGTCGATGTTCTTGG
GGCTTGCTCGAGCAGGGCGATGCCTGGCTGATGATGCTACTGCGGTCCGT
CGGCTTGAGGAAAAGGTGGCCAAGAGACGAAATACATACTAATACGTCGC
AAGAAGAGCGGCGGTAATGTTTTTTTTTCCGGTACAGCAGTCTCGGAGAC
TGCTGTGGTGTGGTTGTGCTATCACAAATCACAATTATAAGACGAGGCAC
AAGTTTGAGTGCAGGTCCTCGATCACACGACGAGGCAAAAATATCTGAGT
GCAGGTCCGTCGACCCGAGGAAAGGTGGTGTGTATCCACACCAACACCCA
ACACCCACTTTGATTATGTTGCAGCAGCTTGTTATTCGTGTTCACTTGAT
GGACGGGTGTTTTTCCCACGAGGTTTTCCAGATGTCAATGTGGACCGGAT
AGAAAGGGGGTGCGATGACTGATGTAAACCATGGTGGCTTGTCATCTGGC
GATGAGTCGTGGTTATCAGGAGCCGAACGAAAGATGTGTAGCACGTATGC
CGCTGGTGCGATTGCGGGACGGACTGCGGCCGTCAGGACACATACTCTTG
TGCGGGCCGGTTTTGTACACGCGAATGTCGGTCGACGTGTATGGAAAAAT
CGGTGGCACGGTGGTTACGGTACCACACTGTTCGACCCTGGGGTTACCCC
TATTTTGAGGCCAAAAATGTGTCCCAAACCGGGTGAACTTTTCGTGGCAA
ATAGACTGCGCTTTTCCTTCTTGGACCAATAAAAACGTTTGGAATTTGAA
TCAATATAAAAAGACACACGAACACACACGAACAGACTGGACAAATATGG
TCAAGAGCGTTCACGCAGCAATGCGCGAGGTGGACACCCGTCACTGCGCT
CACTGAGGCTGCTGGCACACACAAAAAGCCAGTGCCCCACAGCCCGACCG
GTCATAGATGGCGGACCCCACCGGTTCGACGGCGGACCCGCCCGCTTCGA
CGGCGGACCCGCCCGTTCTGTTGCCGAAAATAAGAAAAAGGGCAACGGGC
AAACAGCAGGGCAGTTGTGAGAGCGGGAATACCAAAAATTGCGCGCTGCT
GCTGCTCCTGCTGTATTTTCTCGCTCTCAACACCAAGTCTGTCGATGATA
GCAGCTGCATGCAGCTTCGCCTGCCTCTCTTGGTATCGTCCTGCTTATGT
TGGTTCTATCAACCTGTAGGACTCGGAGGCATACGAAGTAGTCGCACTAG
AAGGGAACAGCAAGGCCAAAAACACACGAGGGCAAAGACACGATGACTGT
TGGATCTTGGGAGTGTACAATTACCAAATTGGGAGATGCAGCATACCACG
ATATCCTGGCTTCGGCTGGGCTTGAAATAACCATTTTGCTGTCCTCCACT
CTTTGCAGGAGTGGCTTCCTAGGTTCGGGCGAGGGCATGTGTGGAGCTAT
GGCAGTGTATGTGTTGCTATTTTGTTTGAGTCACTTAGCTGCTGACACAA
TGACTGTTGGATCCTGGGAGTGTACGATAATCAAATTGGGAGATGCAGCA
TACCACGATATCCTGGCTTCGGCTGGGCTTGAAATAACCCTTTTGCTGTC
CTCCGCTCTTTGCATCAGTAGCTTCCTAGATTCGAGCGAGTGCATTTGTG
TAGCTGAGATGTGTGTCTACGTAAAAGAACATGTGGAGAGAGTCGTATTG
GCATTCGCATCAAGCGCATTGCGCATTTTTCGAGTTTTGGCCCCCTTCCA
GGGACCTTGATTTTAACCCGCTGGCACTGACGTCTTTTAATTGGTCAGCC
GGTTAGCG

protein sequence of EsuBft2191_6a-0001

>EsuBft2191_6 ID=EsuBft2191_6|Name=EsuBft2191_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=64bp
MRIVIHEAHGGIGQTGKGHVKLTGGCEYDMSMFLGLARAGRCLADDATAV
RRLEEKVAKRRNTY

mRNA from alignment at Scaffold_544:109..3041-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft2191_6a-0001 ID=EsuBft2191_6a-0001|Name=EsuBft2191_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2933bp|location=Sequence derived from alignment at Scaffold_544:109..3041- (Ectocarpus subulatus male Bft15b)
CGAAGACCAAGAATCTGGGCGAAGGAGTCGATCCCCCGTTCTCGGAGAAG
CGTTGACTACTTTGGTACGTGCGATGTGACGTTGCGTGTGGTTCCACAGC
ACAACAGAGAGCGCTAGCTGTTAGCAGACAGCTCTCAGTGCACAGTGATG
CGCATCGTTATCCATGAGGCACACGGGGGCATAGGCCAAACGGGCAAAGG
CCATGTGAAGTTGACGGGCGGGTGTGAATATGACATGTCGATGTTCTTGG
GGCTTGCTCGAGCAGGGCGATGCCTGGCTGATGATGCTACTGCGGTGCGT
GCGCTGGTGTGCATGGAGCGGCACAGTTTCAATCACAAGGGTTACAAACC
TAGTGTGCAACACGCGACAGAGGATATCATACGAGAATGCGACACAACCG
AACCCCTGTGCGTGCGAAGAAGGGTCACCAAGACCGCTGAAGCGGGCCAA
TTTGGTTGTCTTTACAAACTTCAACGCGTGCGTAGGAAATACAGACTATA
CGTCGCAAGAGCGGATGTAATTTCTAATTTCCGGTACAGCAGTCTCGAAG
ACTGCTGTGGTGTGGTTGTGATAACACAAATCACAATTACCAGACGAGGC
ACAAAGTTTGAGTGCAGGTCCTCAATAACACGACAAGGCACAAATATTCG
AGTGCAGGTCCGTCGGCTTGAGGAAAAGGTGGCCAAGAGACGAAATACAT
ACTAATACGTCGCAAGAAGAGCGGCGGTAATGTTTTTTTTTCCGGTACAG
CAGTCTCGGAGACTGCTGTGGTGTGGTTGTGCTATCACAAATCACAATTA
TAAGACGAGGCACAAGTTTGAGTGCAGGTCCTCGATCACACGACGAGGCA
AAAATATCTGAGTGCAGGTCCGTCGACCCGAGGAAAGGTGGTGTGTATCC
ACACCAACACCCAACACCCACTTTGATTATGTTGCAGCAGCTTGTTATTC
GTGTTCACTTGATGGACGGGTGTTTTTCCCACGAGGTTTTCCAGATGTCA
ATGTGGACCGGATAGAAAGGGGGTGCGATGACTGATGTAAACCATGGTGG
CTTGTCATCTGGCGATGAGTCGTGGTTATCAGGAGCCGAACGAAAGATGT
GTAGCACGTATGCCGCTGGTGCGATTGCGGGACGGACTGCGGCCGTCAGG
ACACATACTCTTGTGCGGGCCGGTTTTGTACACGCGAATGTCGGTCGACG
TGTATGGAAAAATCGGTGGCACGGTAAGCATTAACATACAACGAATCGAT
ATAGAGCGAGCTAGTACGCTGGTGCGTATGATGCCGGCTCACGGTTATTA
ATTGTGGACCAGGGTACGGGTCATCCGGAGATGAGCCATGGTGGTCAGGA
GCCGCGCACAAGTTGCGTGGCGTGTAGGTCGCAAGTGCGGCTGGGATACA
GTGTGCGGTCGTTATGATACATTGCATACTGAATGTTGCTCGAACCGGTT
TGCACGTACGACTAGGGGTCGTTGGCACGGAATTATCGGTAGAGAGGCAA
AAAGACACAACGCGATATGTACAGGTGGTTATGGTACCACACTGTATATA
CCGCTGGTTACGCTAGAGCCTTCTGATGCGGTTCATCTGGAGATGAGCCG
TGGTGGTCAGGAGCCGCACACAAGTTGCGTGGCGTGTAGGTCGCTGGTGC
GGCTGGGATACTGTATCCGGCCGTTATGATACGTACTCATACTGAATGTT
ACTCGAATCGGTTTGCACGTGCGACTGTGGGTCGTTGGCACGGAATAATC
AGTAGAGAACAAAAGACACAACGCGATATATACAGGTGGTTACGGTACCA
CACTGTTCGACCCTGGGGTTACCCCTATTTTGAGGCCAAAAATGTGTCCC
AAACCGGGTGAACTTTTCGTGGCAAATAGACTGCGCTTTTCCTTCTTGGA
CCAATAAAAACGTTTGGAATTTGAATCAATATAAAAAGACACACGAACAC
ACACGAACAGACTGGACAAATATGGTCAAGAGCGTTCACGCAGCAATGCG
CGAGGTGGACACCCGTCACTGCGCTCACTGAGGCTGCTGGCACACACAAA
AAGCCAGTGCCCCACAGCCCGACCGGTCATAGATGGCGGACCCCACCGGT
TCGACGGCGGACCCGCCCGCTTCGACGGCGGACCCGCCCGTTCTGTTGCC
GAAAATAAGAAAAAGGGCAACGGGCAAACAGCAGGGCAGTTGTGAGAGCG
GGAATACCAAAAATTGCGCGCTGCTGCTGCTCCTGCTGTATTTTCTCGCT
CTCAACACCAAGTCTGTCGATGATAGCAGCTGCATGCAGCTTCGCCTGCC
TCTCTTGGTATCGTCCTGCTTATGTTGGTTCTATCAACCTGTAGGACTCG
GAGGCATACGAAGTAGTCGCACTAGAAGGGAACAGCAAGGCCAAAAACAC
ACGAGGGCAAAGACACGATGACTGTTGGATCTTGGGAGTGTACAATTACC
AAATTGGGAGATGCAGCATACCACGATATCCTGGCTTCGGCTGGGCTTGA
AATAACCATTTTGCTGTCCTCCACTCTTTGCAGGAGTGGCTTCCTAGGTT
CGGGCGAGGGCATGTGTGGAGCTATGGCAGTGTATGTGTTGCTATTTTGT
TTGAGTCACTTAGCTGCTGACACAATGACTGTTGGATCCTGGGAGTGTAC
GATAATCAAATTGGGAGATGCAGCATACCACGATATCCTGGCTTCGGCTG
GGCTTGAAATAACCCTTTTGCTGTCCTCCGCTCTTTGCATCAGTAGCTTC
CTAGATTCGAGCGAGTGCATTTGTGTAGCTGAGATGTGTGTCTACGTAAA
AGAACATGTGGAGAGAGTCGTATTGGCATTCGCATCAAGCGCATTGCGCA
TTTTTCGAGTTTTGGCCCCCTTCCAGGGACCTTGATTTTAACCCGCTGGC
ACTGACGTCTTTTAATTGGTCAGCCGGTTAGCG

Coding sequence (CDS) from alignment at Scaffold_544:109..3041-

>EsuBft2191_6a-0001 ID=EsuBft2191_6a-0001|Name=EsuBft2191_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=195bp|location=Sequence derived from alignment at Scaffold_544:109..3041- (Ectocarpus subulatus male Bft15b)
ATGCGCATCGTTATCCATGAGGCACACGGGGGCATAGGCCAAACGGGCAA
AGGCCATGTGAAGTTGACGGGCGGGTGTGAATATGACATGTCGATGTTCT
TGGGGCTTGCTCGAGCAGGGCGATGCCTGGCTGATGATGCTACTGCGGTC
CGTCGGCTTGAGGAAAAGGTGGCCAAGAGACGAAATACATACTAA