Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 568076.XP_007817118.1 |
| ProteomeId | EsuBft2133_6 |
| Protein domains | IPR008906 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 4751|Fungi |
| Length | 118 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.96e-05 |
| EggNOG OGs | KOG1121@1|root,KOG1121@2759|Eukaryota,39UGI@33154|Opisthokonta,3P5TX@4751|Fungi,3QX04@4890|Ascomycota,21E0K@147550|Sordariomycetes |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | hAT family C-terminal dimerisation region |
| COG category | L |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
| GO | 0046983 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2133_6a-0001 ID=EsuBft2133_6a-0001|Name=EsuBft2133_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1185bp|location=Sequence derived from alignment at Scaffold_68:335883..339151+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TTCGCGAGCTCTTGTGCACGAAAATGAATGGTCGTCGACAAGTTCCTCCC
CTTCTCCTTCTTCTCTGGGAACTCGTGGAAGGATGTGATGGGCTTGGAGA
CCGCCGATGACACACCGTATCCTGCGCTTCCTAGCAGGCGCATCGAGCAC
CTCCTGGTGGAGATGTTCGTCGCCACCAAGAAGGCTGTGATGGGGAACAT
GTTGGAAGAGATCAAGAAGGCACCTCTGCCCATCGTTCACTACGGGGTCG
ACCTGTGGACGTGCAAGACTTCTGGGATGAAATTCATTGATCGCTTTCAG
GCGCTGTACATGACGGCAGAAGAGTTGGACACGCGGGAAGTACTGCCTTG
GTGGCGAAACACTGGTCGCAAGATGTTTCCGTACCTGGCGCCAGTAGCGC
AGCAGGTGCTTGGAAACCAGGCGGGTGCCGCGCAGGTAGAGCGCGACTTC
AGTAGTTGCGCTAATCTCCTCACGCGCAACAGGAGCCGCATCGACACCTA
CTGGGTAGAGATGGTGATGTTCCTCCACGTCAACTACAAGCGTATCCCCG
CGTTCAAGGACATTCCCATGATTGCCGCCAAGGATATCAGGACATGTCTG
CCGCCACGGTTCAACGGGGGGGATGCTGACCTGGCGGCCGCTGAGGCTGC
CTTCGACGTGATTGAGAACACCAACAACTCGGACATCGGCGTGTGAAAGT
CGCGAGCGTTTCATAAGTAGCCTCTTTCTTTGACTCCGTAAGAAGGACGT
AGCAGTCAAAGTAGGTTGAGTCGGAGTCGCATGGGAAGGCTAAGGCTTCT
GCTCTTGGGTGTTGTGTTACCGAACTTCAGTTTCGCGGTCGTAAACTAAG
TACTGCGCGGCTACGGCAGTTGATTTGATTTGAACGATAGGCTAATTTCA
GTGCTGGGTACGATTTCTATTTTGTTCAATGCTATAGCGCCCTTGCCCCT
CTTCCTGTACCTTCGTCGTAAACACGCACGTCGTCAAAGTCGTCATGTTC
TGCAGGGTAATTCACGGGTACCGCGTAAGTACCGGGGGCTCTTCTGTAGA
CACAGAGTTCCGTAACACCCCCTGTACCCTACAGAATATCTCTGTGCCGC
CCCCTGTATCCTACAGAATAGTTCTGTAGCACCCTCGCACAATACAGAAT
AGTTCTGTGAGTTCTGTGACACCCCCGGTACCCTA back to topprotein sequence of EsuBft2133_6a-0001 >EsuBft2133_6 ID=EsuBft2133_6|Name=EsuBft2133_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=222bp
MVVDKFLPFSFFSGNSWKDVMGLETADDTPYPALPSRRIEHLLVEMFVAT
KKAVMGNMLEEIKKAPLPIVHYGVDLWTCKTSGMKFIDRFQALYMTAEEL
DTREVLPWWRNTGRKMFPYLAPVAQQVLGNQAGAAQVERDFSSCANLLTR
NRSRIDTYWVEMVMFLHVNYKRIPAFKDIPMIAAKDIRTCLPPRFNGGDA
DLAAAEAAFDVIENTNNSDIGV back to topmRNA from alignment at Scaffold_68:335883..339151+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2133_6a-0001 ID=EsuBft2133_6a-0001|Name=EsuBft2133_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3269bp|location=Sequence derived from alignment at Scaffold_68:335883..339151+ (Ectocarpus subulatus male Bft15b)
TTCGCGAGCTCTTGTGCACGAAAATGAATGGTCGTCGACAAGTTCCTCCC
CTTCTCCTTCTTCTCTGGGAACTCGTGGAAGGATGTGATGGGCTTGGAGA
CCGCCGATGACACACCGTATCCTGCGCTTCCTAGCAGGCGCATCGAGCAC
CTCCTGGTGGAGATGTTCGTCGCCACCAAGAAGGTCAGCATTGTTTTTTG
GCATATAATTCGTCAAACGTGAGAGGAATGTAATACAAAGTACATGCAAC
AGACATTATCCTTCATCATGTGGTTTTCTACTCGAGATTGCAACGTGAGT
GTTCACCCGCAAAAACACCCATTAGAAACACACGTTTTTACGCACTTTTT
TTCTATTGTTATATTTATCCTACAAACTCAAGTGATAAGGATTTTTCCGG
GTTTTAGGACACGGTTATATACACACATCAATATAAAAACATAAAAACAC
CATACTTGCCGAAAATGACAGCAAATAGTTTGTATTGGTCTTTGTTTTCC
CGAACGCTCGTTCAGGTCTATGGAGAGACTAACCGACATCATTTGTTGCC
TTGCGTCGTTCGGTTCCCCTCGGCCTGCAGGCTGTGATGGGGAACATGTT
GGAAGAGATCAAGAAGGCACCTCTGCCCATCGTTCACTACGGGGTCGACC
TGTGGACGTGCAAGACTTCTGGGATGAAATTCATTGATGTCCACGCGTTC
TTGGTCGACAGCAACTTCGAGCTGCGACACGTTCTTCTTGCTGTGAGTTG
GACAGCTGTTGTGTCTCTATCCCCCTTGCCCTCCGCAAGGTATTCGAAGC
GCTTACGGTGATACTTGATTATCAAAATTATTGTATAGCAGCAGCACGCA
TGCGTACGATGTGTATGTCAAGAAGAAGTTGTGATTTAGTTGCCTTTCAG
CGAGGTAGACGCGAAGGCCGTCTTCGAGGTACTCTCTGGGTGTACTGGCT
CCGCTGAAGATAATGTGTTTGTACACATTGTGAGATGTGAAACAAAACAA
CCACCCTTCGTATTTTTTGAGCCAGCGATCTCCCTCATCCTCCTCCTCGT
CAGTGCATAGTTTTGAGTGTGCATGAGCGTACAAGAGTAACAACGCTGTG
TCTTCCTACTGCTGTCGCTAAATGTACGTCNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NGACCCCGACGAGCCGCTGAAGGTGTTCGACATCCCGGCGACGCCGGTTT
CCCCGGAAGCAGAGCAGGCGGACGAGGAGGTCCCGAAGAAAAAGAAGTCG
CTGCCGCACAAGATGGTGGAGCCGGCTGCCTTGCGTCCCGTCGCCACCAA
GACCCGGGAGTTGCTCACCAAAACCCTCGTGGAGAAGTTGTACCGAAGGG
TTTGGGACCAGGACAGCGCCGACCCTTCTCCCTTCCGCAACGCCTCCGTG
CTGCTCACCCCGTCGTACAAAGACACCAACTTTCTCCAAGCGCATGCTTT
GACGGCTGCAGACTCGCAGCACCTTGACCAACGCAAAGCCCACTTGGCCC
CTACCATCGACACCGAGGTGGACCAGAAACTGAACGATTGCTGGGCGGAC
ATCAAAGCGAGGGCGTCGGAGGCTGCGCGGAAGAAACACTCGGCACGTGC
GACCGCAGAGGGCGGCCAACCACCTCTGAAGCGCCTCTCCACGCCGGCCA
CGAAAGCCAGGCCTAGGTTTGCTTCCCTGGCACGAAACAGGGTCCGCGGC
GATACTGAAGACGTGGGCGAGGGCGACAGCGAGGACAAGGTGCTCATGCA
GCAGGTCAGCCAAGAACTCGAGCGCTTTCAGGCGCTGTACATGACGGCAG
AAGAGGTGAGCTTCCTTGCAGTTTATATGAAAGTGTTGTTAATAATTTTA
ATTTTGGGCTTCAAGCGGGAGGGAGGGCCGGAAGGATCTGAGTTCACCGC
GGTCACAGGTCAAAGTAGGGATGCGAACTGCAAGAAGTTTCAGTTTGACT
TTTTTTTCCCGGTGGCGCAAAGTTGCACAGATGTGTTTCGTGTTGTTTTC
TTATCTTCGTCCCTGTCACCCTTGGATCTGTAATGCTGCTGTGCAGTTGG
ACACGCGGGAAGTACTGCCTTGGTGGCGAAACACTGGTCGCAAGATGTTT
CCGTACCTGGCGCCAGTAGCGCAGCAGGTGCTTGGAAACCAGGCGGGTGC
CGCGCAGGTAGAGCGCGACTTCAGTAGTTGCGCTAATCTCCTCACGCGCA
ACAGGAGCCGCATCGACACCTACTGGGTAGAGATGGTGATGTTCCTCCAC
GTCAACTACAAGCGTATCCCCGCGTTCAAGGACATTCCCATGATTGCCGC
CAAGGATATCAGGACATGTCTGCCGCCACGGTTCAACGGGGGGGATGCTG
ACCTGGCGGCCGCTGAGGCTGCCTTCGACGTGATTGAGAACACCAACAAC
TCGGACATCGGCGTGTGAAAGTCGCGAGCGTTTCATAAGTAGCCTCTTTC
TTTGACTCCGTAAGAAGGACGTAGCAGTCAAAGTAGGTTGAGTCGGAGTC
GCATGGGAAGGCTAAGGCTTCTGCTCTTGGGTGTTGTGTTACCGAACTTC
AGTTTCGCGGTCGTAAACTAAGTACTGCGCGGCTACGGCAGTTGATTTGA
TTTGAACGATAGGCTAATTTCAGTGCTGGGTACGATTTCTATTTTGTTCA
ATGCTATAGCGCCCTTGCCCCTCTTCCTGTACCTTCGTCGTAAACACGCA
CGTCGTCAAAGTCGTCATGTTCTGCAGGGTAATTCACGGGTACCGCGTAA
GTACCGGGGGCTCTTCTGTAGACACAGAGTTCCGTAACACCCCCTGTACC
CTACAGAATATCTCTGTGCCGCCCCCTGTATCCTACAGAATAGTTCTGTA
ACACCCTCGCACAATACAGAATAGTTCTGTAGCACCCTCGCACAATACAG
AATAGTTCTGTGGGTTCTGTAGCACCCTCGTACAATACAGAATAGTTCTG
TGAGGTTCTGTAGCACCCTCGCACAATACAGAATAGTTCTGTGAGTTCTG
TGACACCCCCGGTACCCTA back to topCoding sequence (CDS) from alignment at Scaffold_68:335883..339151+ >EsuBft2133_6a-0001 ID=EsuBft2133_6a-0001|Name=EsuBft2133_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=669bp|location=Sequence derived from alignment at Scaffold_68:335883..339151+ (Ectocarpus subulatus male Bft15b)
ATGGTCGTCGACAAGTTCCTCCCCTTCTCCTTCTTCTCTGGGAACTCGTG
GAAGGATGTGATGGGCTTGGAGACCGCCGATGACACACCGTATCCTGCGC
TTCCTAGCAGGCGCATCGAGCACCTCCTGGTGGAGATGTTCGTCGCCACC
AAGAAGGCTGTGATGGGGAACATGTTGGAAGAGATCAAGAAGGCACCTCT
GCCCATCGTTCACTACGGGGTCGACCTGTGGACGTGCAAGACTTCTGGGA
TGAAATTCATTGATCGCTTTCAGGCGCTGTACATGACGGCAGAAGAGTTG
GACACGCGGGAAGTACTGCCTTGGTGGCGAAACACTGGTCGCAAGATGTT
TCCGTACCTGGCGCCAGTAGCGCAGCAGGTGCTTGGAAACCAGGCGGGTG
CCGCGCAGGTAGAGCGCGACTTCAGTAGTTGCGCTAATCTCCTCACGCGC
AACAGGAGCCGCATCGACACCTACTGGGTAGAGATGGTGATGTTCCTCCA
CGTCAACTACAAGCGTATCCCCGCGTTCAAGGACATTCCCATGATTGCCG
CCAAGGATATCAGGACATGTCTGCCGCCACGGTTCAACGGGGGGGATGCT
GACCTGGCGGCCGCTGAGGCTGCCTTCGACGTGATTGAGAACACCAACAA
CTCGGACATCGGCGTGTGA back to top
|