Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2133_4 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 106 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2133_4a-0001 ID=EsuBft2133_4a-0001|Name=EsuBft2133_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1068bp|location=Sequence derived from alignment at Scaffold_68:352785..353895- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACCAAGAACGTCCGCGCCAGCTACATCCTCGGCATCACCTTCATCGC
CGCTGTCGAGAAGAAGAAATGGGGGCACCAGAACTGTTGGGGCTACCACA
TCGTCGCCCTCTCCAACGACGTCACCATCATCGAACGCCTATCCAAGACG
CCCACCCTAGAAGCGATTGATCTCGCCTCTCGCCCTACTGCCGGCGCCGG
CGCTTCTTCCAACTGCCCCGGCACTAAAGAAAAACGAAAGGCTCCCTCAG
GCGCGCGACGAAAGCATGAAACCGCAAAGGAACCCGAAGAAGAAACCAAC
GACGAATACCCCGACGACGAACAGGACCCCGACTTTGCCCCCGGCGACGA
AGGGGACGACAACGAAGACAACGACGGCACTGACGATGCCGACAACGACG
ATGCCGACAACCGCGGCAACGGCAACGATGATTCCGGCTCCGACTATGCC
GACTCCGATGACGCCGCCTCCGACGACGGCTATGACACCGAATGGTGTTC
CCGTTTATCTGCCTTCCTTTGTTCGTTTGTTTGCCCTGAAGTCGGCCACC
TCTCTGCATCATAGTGTCCGCTTCGGTGTTTCCCCGCGTATGTTTTGCGT
GTTTGATCGCTGTTGCTTTCGCGTCTCGTCGGCTGTCTTTTCTTGAGTAC
TTTTGATTGTGTCCATCTTGAGTGCTTTTCTACGAATCTTCATGCCAAAC
GATCGTTGAGCGTACTTTGGTACCACGTACCGTTGTACCTTAACAACTGT
TGGCCCAAACGATCGATTGATTGTAGTTGTGCATCGTTTCCTTTACGGAC
CATTGAACTTTTTCTGCCCCCATTTGAGTTGTCGATCCACGCTATCGTCG
ACTATCTTTGCCGATGAATCTGATTGAGCATTGTTGCTCCGCATCATCGT
GTTCGCTGGGAATGTTCTTATCTTTTCCACGTGCCGTCGCTAAACTGGTT
TCCAATTTGATTTTCGATCTTCACGTTTGTTGGGTATGCGATTTCCGCTT
CATTTTGTGATTCCCGGTACTCGTCCAAATTTCCTTCTATTCTTGTGAAT
TTTGTTCCACAATTCAAT back to topprotein sequence of EsuBft2133_4a-0001 >EsuBft2133_4 ID=EsuBft2133_4|Name=EsuBft2133_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=187bp
MTKNVRASYILGITFIAAVEKKKWGHQNCWGYHIVALSNDVTIIERLSKT
PTLEAIDLASRPTAGAGASSNCPGTKEKRKAPSGARRKHETAKEPEEETN
DEYPDDEQDPDFAPGDEGDDNEDNDGTDDADNDDADNRGNGNDDSGSDYA
DSDDAASDDGYDTEWCSRLSAFLCSFVCPEVGHLSAS back to topmRNA from alignment at Scaffold_68:352785..353895- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2133_4a-0001 ID=EsuBft2133_4a-0001|Name=EsuBft2133_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1111bp|location=Sequence derived from alignment at Scaffold_68:352785..353895- (Ectocarpus subulatus male Bft15b)
ATGACCAAGAACGTCCGCGCCAGCTACATCCTCGGCATCACCTTCATCGC
CGCTGTCGAGAAGAAGAAATGGGGGCACCAGAACTGTTGGGGCTACCACA
TCGTCGCCCTCTCCAACGACGTCACCATCATCGAACGCCTATCCAAGACG
CCCACCCTAGAAGCGATTGATCTCGCCTCTCGCCCTACTGCCGGCGCCGG
CGCTTCTTCCAACTGCCCCGGCACTAAAGAAAAACGAAAGGCTCCCTCAG
GCGCGCGACGAAAGCATGAAACCGCAAAGGGTCCGATCCCCATCCCGTTC
CCGCGCCGACTTTTCTGGAGAAGAACCCGAAGAAGAAACCAACGACGAAT
ACCCCGACGACGAACAGGACCCCGACTTTGCCCCCGGCGACGAAGGGGAC
GACAACGAAGACAACGACGGCACTGACGATGCCGACAACGACGATGCCGA
CAACCGCGGCAACGGCAACGATGATTCCGGCTCCGACTATGCCGACTCCG
ATGACGCCGCCTCCGACGACGGCTATGACACCGAATGGTGTTCCCGTTTA
TCTGCCTTCCTTTGTTCGTTTGTTTGCCCTGAAGTCGGCCACCTCTCTGC
ATCATAGTGTCCGCTTCGGTGTTTCCCCGCGTATGTTTTGCGTGTTTGAT
CGCTGTTGCTTTCGCGTCTCGTCGGCTGTCTTTTCTTGAGTACTTTTGAT
TGTGTCCATCTTGAGTGCTTTTCTACGAATCTTCATGCCAAACGATCGTT
GAGCGTACTTTGGTACCACGTACCGTTGTACCTTAACAACTGTTGGCCCA
AACGATCGATTGATTGTAGTTGTGCATCGTTTCCTTTACGGACCATTGAA
CTTTTTCTGCCCCCATTTGAGTTGTCGATCCACGCTATCGTCGACTATCT
TTGCCGATGAATCTGATTGAGCATTGTTGCTCCGCATCATCGTGTTCGCT
GGGAATGTTCTTATCTTTTCCACGTGCCGTCGCTAAACTGGTTTCCAATT
TGATTTTCGATCTTCACGTTTGTTGGGTATGCGATTTCCGCTTCATTTTG
TGATTCCCGGTACTCGTCCAAATTTCCTTCTATTCTTGTGAATTTTGTTC
CACAATTCAAT back to topCoding sequence (CDS) from alignment at Scaffold_68:352785..353895- >EsuBft2133_4a-0001 ID=EsuBft2133_4a-0001|Name=EsuBft2133_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=564bp|location=Sequence derived from alignment at Scaffold_68:352785..353895- (Ectocarpus subulatus male Bft15b)
ATGACCAAGAACGTCCGCGCCAGCTACATCCTCGGCATCACCTTCATCGC
CGCTGTCGAGAAGAAGAAATGGGGGCACCAGAACTGTTGGGGCTACCACA
TCGTCGCCCTCTCCAACGACGTCACCATCATCGAACGCCTATCCAAGACG
CCCACCCTAGAAGCGATTGATCTCGCCTCTCGCCCTACTGCCGGCGCCGG
CGCTTCTTCCAACTGCCCCGGCACTAAAGAAAAACGAAAGGCTCCCTCAG
GCGCGCGACGAAAGCATGAAACCGCAAAGGAACCCGAAGAAGAAACCAAC
GACGAATACCCCGACGACGAACAGGACCCCGACTTTGCCCCCGGCGACGA
AGGGGACGACAACGAAGACAACGACGGCACTGACGATGCCGACAACGACG
ATGCCGACAACCGCGGCAACGGCAACGATGATTCCGGCTCCGACTATGCC
GACTCCGATGACGCCGCCTCCGACGACGGCTATGACACCGAATGGTGTTC
CCGTTTATCTGCCTTCCTTTGTTCGTTTGTTTGCCCTGAAGTCGGCCACC
TCTCTGCATCATAG back to top
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