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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 2880.D8LLL2 |
| ProteomeId | EsuBft2116_4 |
| Protein domains | IPR020892 |
| Protein domains | IPR002130 |
| Protein domains | IPR029000 |
| Protein domains | PTHR11071 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | peptidyl-prolyl cis-trans isomerase cyp65 os:arabidopsis thaliana gn:cyp65 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1273 |
| Hectar predicted targeting category | other localisation |
| Evalue | 7.21e-151 |
| EggNOG OGs | COG0652@1|root,KOG0883@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Preferred name | PPIL2 |
| KEGG ko | ko:K06532,ko:K10598 |
| KEGG Pathway | ko04120,ko05202,map04120,map05202 |
| GOs | GO:0000003,GO:0000209,GO:0000375,GO:0000377,GO:0000398,GO:0000413,GO:0002376,GO:0003006,GO:0003674,GO:0003755,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005794,GO:0005796,GO:0005886,GO:0006139,GO:0006396,GO:0006397,GO:0006464,GO:0006725,GO:0006807,GO:0006928,GO:0007275,GO:0007530,GO:0008104,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0012505,GO:0016020,GO:0016070,GO:0016071,GO:0016477,GO:0016567,GO:0016740,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0018992,GO:0019538,GO:0019787,GO:0022414,GO:0031974,GO:0031981,GO:0032446,GO:0032501,GO:0032502,GO:0033036,GO:0034450,GO:0034613,GO:0034641,GO:0036211,GO:0040011,GO:0040021,GO:0040022,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048856,GO:0048870,GO:0050900,GO:0051179,GO:0051641,GO:0051674,GO:0061630,GO:0061659,GO:0070013,GO:0070647,GO:0070727,GO:0071704,GO:0071944,GO:0072657,GO:0072659,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1990778 |
| EC | 5.2.1.8 |
| Description | peptidyl-prolyl cis-trans isomerase activity |
| COG category | O |
| BRITE | ko00000,ko00001,ko01000,ko03041,ko03110,ko04090,ko04121,ko04147 |
Cross References
External references for this mRNA
| Database | Accession |
| GO | 0031227 |
| GO | 0006457 |
| EC | 5.2.1.8 |
| GO | 0003755 |
| GO | 0007596 |
| GO | 0000413 |
| GO | 0050900 |
| GO | 0040022 |
| GO | 0034450 |
| GO | 0000209 |
| GO | 0005796 |
| GO | 0005730 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2116_4a-0001 ID=EsuBft2116_4a-0001|Name=EsuBft2116_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1273bp|location=Sequence derived from alignment at Scaffold_129:406773..411556+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATCTTGTCGAAGGCAGGATCATGACCAGCGGGAAGACGTCGGGCTCGTTC ACCTCCAGCGCGCTTGCGGTGAGCACGGAGAGCAAAGCCCGCCTTGCCAC GGACGACGAAATCAACGACGCCCGCTGGTACCGTCTCCGAAAACTTGGGA AGAAGGGGTACTGCCAGCTTCAGACTACCAAGGGGAACATCAACGTCGAG ATCCACTGCGACATCGTTCCGCGCATGGCCGAGAACTTCCTGGGACTGTG TGAGAAGGAGTACTACGATGGGACCAAGTTCCACCGAAGCATTCGTAATT TCATGCTTCAGGGGGGAGACCCGACGGGGTCCGGGCGGGGAGGCGAGAGC TACTGGGGCGGCAAGATCAAGGACGAGTTCGAGTCCCGCATGACGCACGA CAAGAGGGGCGTGCTGAGCATGGCCAACTCGGGACCGGACACGACGGGCT CGCAGTTCTTCATCACGTACAAGTCGTGCAGGCACCTCGACAACCAACAC TCCGTCTTCGGCAGGGTGGTCGGTGGCATGCCAGCGCTGGCCGCGATAGA GGCGGTCCCCACAGACTCGAAGGACAAGCCGAGAGAGGACATCGTGCTTG TCAAGGCGACGGTGTTCAGCAACCCTGTCACGGAGATGGAGGACGCGCTG GAGCAAGAGCTGCAGGCCAAGATCGACGCGAGAGAAGTGAGCAAGGGAGG CAAGAAAGTCGACAAAGTCCGCACCGCTCGCCCCCGACCACGACCGAATC GGCTGGGCAAGCAACCCGACGCCAGAAGCACGGCCGGGCACCAAGACCGG CACATTGCAGAACACTGGCTCTCGAACATGTGCGACCTGTACGAACCCGA GGGTGAGGCCTTTGTGTCCCCCGGGGATTCATGGCGTTCGTGCACGGGGC TTCTGACAGATGCGTCGTTACCTCCAAGGTTAACGAGTGGCGCTGACATC CCGGGAATAGAGGCTTTGTTGACGCCCCCCGGGTATTTGTTTGCCCTCCT CCTCCCTTCAGCCGCGACCACCCTGCCCCGCTCGGCGTCGATGTCGTCGG CCGCCACAGCACCGGAAGGAGCGGCAAGAGCGGCCGGAGTTAGCGCGGCC GGCAGCGGCAGCAGCATTAACTGGGCAGACCCGGCGATTGACGCGGCCGC GCGTGCTACCGCTGCCGCGGCAAAGGGGAAGGCGAAGGCGAAGGCGAAGA AGGGAGGCGCTGGCGGATTTGGAGATTTTTCGGAGTGGTAGACTCGCGCT GTTCCACGTGTCGCGGGCCTATG back to topprotein sequence of EsuBft2116_4a-0001 >EsuBft2116_4 ID=EsuBft2116_4|Name=EsuBft2116_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=406bp
MTSGKTSGSFTSSALAVSTESKARLATDDEINDARWYRLRKLGKKGYCQL QTTKGNINVEIHCDIVPRMAENFLGLCEKEYYDGTKFHRSIRNFMLQGGD PTGSGRGGESYWGGKIKDEFESRMTHDKRGVLSMANSGPDTTGSQFFITY KSCRHLDNQHSVFGRVVGGMPALAAIEAVPTDSKDKPREDIVLVKATVFS NPVTEMEDALEQELQAKIDAREVSKGGKKVDKVRTARPRPRPNRLGKQPD ARSTAGHQDRHIAEHWLSNMCDLYEPEGEAFVSPGDSWRSCTGLLTDASL PPRLTSGADIPGIEALLTPPGYLFALLLPSAATTLPRSASMSSAATAPEG AARAAGVSAAGSGSSINWADPAIDAAARATAAAAKGKAKAKAKKGGAGGF GDFSEW back to topmRNA from alignment at Scaffold_129:406773..411556+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2116_4a-0001 ID=EsuBft2116_4a-0001|Name=EsuBft2116_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4784bp|location=Sequence derived from alignment at Scaffold_129:406773..411556+ (Ectocarpus subulatus male Bft15b) ATCTTGTCGAAGGCAGGATCATGACCAGCGGGAAGACGTCGGGCTCGTTC
ACCTCCAGCGCGCTTGCGGTAAGAAGAGTGGGGGAGCGGCTTTTCTCTGT
CGCGTGTTCTACGGCGGTGAAAGACGGGGGAAGAAAGGCGACCATCCTCG
GATCATCAACGCTTCGTTTGTCTGCCCTGTTCCCTCCTTATTTGCCAACC
CCATTGGTCCTTCTTGCCCATCATCTCTTGCTCTCTCCTCTAACGGTGTC
TGGCTCTTGTTTGTTTTTGTTTCGCGGTTTTTATTTTTTGGGTAAATGCC
AGTTTCCGATGTGCTGATGTGTTCTTCACGTGTTCTCAGGTGAGCACGGA
GAGCAAAGCCCGCCTTGCCACGGACGACGAAATCAACGACGCCCGCTGGT
ACCGTCTCCGAAAACTTGGGAAGAAGGTAAGACGAAGAGCAACAGCAACC
ACGTAAGACTGTAGCAGCGTTACAGCGTTAGGTCTAAGGCCTTGAGGTTT
GTAGGTTGGTTCGGGGTGAGGGATTTTACCCAACGCTCACTGATGCTCAG
GGGGGGGCGCTGGGTAGAGATGAGAAAGTCAGGGACAGCACAAAGGGGTA
CGACCGCCAAGAAAAGACGCACACGGGCACGAGCACGCAAGTTTGAGAAG
TAGGAAATACACCTTACGTCCGCGAAGCGCAGACCCCCCGTCGGGACAGC
CGGCAGGATAGAAAGCATTGCGGCTTTTTGTACCCCACTAAGACTGTACG
TATTTTCAATACCCAGTGGGTGAGCGCGGTTGATGCTCTGTAGCAGTCCT
CGAAAGCTACACACTTGTAGCGAAGACGGCGGCATCTTGAATTTTTGTGG
ACCATCGGGCCAGGGCGCGCCGAAAAGAACAAGACGTATCCTTCACTCGT
TGGATGCTTTGAATGTCGAATTGCCAGCATCGAGTGATGTGTCGATTGGA
AGTTGCATCCGTACGCCCTCAGTTTTCGCAAATTCTGCCTTCATCCGGGC
ATGCCCTGCTACTCCTGCTACTGCGGCACACCACGCGTCGTCATTCTCTA
ATTCCGTTGTGTCGACGCTTACGACGGGGTGAACCGCACCGGACAACAGG
GGTACTGCCAGCTTCAGACTACCAAGGGGAACATCAACGTCGAGATCCAC
TGCGACATCGTTCCGCGCATGGCCGAGAACTTCCTGGGACTGTGTGAGAA
GGAGTACTACGATGGGACCAAGTTCCACCGAAGCATTCGTAATTTCATGC
TTCAGGTACGTGGGTGTGGGGTACTAAAGCGGTGCCGGAGGCAATGTTTC
GATTTGGTTATATTCGGAACACAAGGACGAAGAAGACACCGATACGATTG
AAACACCAAGGAGTTATTCTTCGATTGTCTACTTAAACGGCCTTGCTGAA
AACGAGTGTGGCCGTTTTTCGCGCGGACCATTACTGGCGACTGTGTGAGG
TGAACATTTCGCGCACCAAGGGGTGAACCTTGCTCCGCCGAAAAGGAGAT
GGTGCATGTTCGTTATTTTTCATTTCCTTGTCATTGATTATTTTGGAGTT
TAGCTCTATTCCCGTATGTTCTTAATTTGTAGTGTTCTGTTACTCTACCG
CGCTAGGTCGATCACTCACACGTTTTAGCGCGCGTTTCCCTGCGTATGAA
AACTCAGCACTGCCTCCAACTTCCCGGTTCTGCTCGCCATATGTTTGTCC
CTCTACCTTCAACCCCCTCCCCCGCGGGAGGTGATCGATAGGATAGATAG
GCCAGGGAAATTATGTTTGAGCCACCTTTCGCAAAGTAAGAAGGAAAGAT
TGGCCATCGGTGATTGGTCCCATGGGAACCATGCTCCATCATCTCGTGGC
CAATGGTCTAACCGCTCAAGGCATGCAAAGCATAGGAGTACCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCGTC
ATCGTAACGCCAATGCAGGGGGGAGACCCGACGGGGTCCGGGCGGGGAGG
CGAGAGCTACTGGGGCGGCAAGATCAAGGACGAGTTCGAGTCCCGCATGA
CGCACGACAAGAGGGGCGTGCTGAGCATGGCCAACTCGGGACCGGACACG
ACGGGCTCGCAGTTCTTCATCACGTACAAGTCGTGCAGGCACCTCGACAA
CCAACACTCCGTCTTCGGCAGGGTGGTCGGGTGAGGGAGAGGCGTTTGCT
CGTTACCTGTTGTTTTCTGTTGGTGGCACTATTTTAGGCGCACTCTTGTT
TTCGGCGGGTGAAATTCTTGTCGTTTGCATCTGTGATTGGGGGGAAACAA
CGTACCGGGTGAGGGAGGGGAAAAATGGGGGCGGGAAATGGAGGCTGTTG
GGAATGCGATTACCCTCAAGCTGGGCCTTGGTCGCAATTCAGGTGTTGCC
ATCTTCCCATACGATTTGAAATTTGGCGTTTGTCTTAAGGAGGCATTTGG
GCCAACGTGCACATGGATTTGTCTCTTTCACGCAGCCCATAACCAGTCTA
CCGGAGGAGAGACAACACAGCATTACGGTTTTATACCTCGCCTTGCATCA
ACCAAAGTGTTGGTCTTAGCGATCCCAAATATGAACTTGAGTTATTCGCT
CTGTCGTGCTTCCTTTTGTGCCACGCACACATGCGTGTACGGCGCCATGT
TTGACCGGAGGAGAGAGCGTAAAGACATCTACTCTCGGCTATCGTATCCG
CACTCGTTTTCCCTTCTTGCCTGCTCTTCTTCCGTTCCGTTTGGCAGAGT
GTGTGCTTGCTTTGCTGCGGGAGAAGTCTCTCTAGCTGCCTCTTCGTTGT
TCTCCTGTGGCGTGCCATGACACCCACCCACTGACCGCTCTCGTCATTGT
TCACGAGAGGAACGTCGCCGACTCGTTGCGATCGCAGCAAGCGGCGCCGC
ACTCGATACCCCTGTCGCTCTTATCTTGCTACTGTCGCCACGATGTCTGC
CTCGCTTGCATCGACAGTCTTGTCTGCTCTGTTTGCTTTTGTTGGTGAAA
GTTCGTGAGAAGACACAGACCCAGCTCCTCTCTCAAGGCTGCGCCATCGT
GCCATCCTTCCTTTTCCCCTTTTTTTTTTTTACCGGACCAGTGGCATGCC
AGCGCTGGCCGCGATAGAGGCGGTCCCCACAGACTCGAAGGACAAGCCGA
GAGAGGACATCGTGCTTGTCAAGGCGACGGTGTTCAGCAACCCTGTCACG
GAGATGGAGGACGCGCTGGAGCAAGAGCTGCAGGCCAAGATCGACGCGAG
AGAAGTGAGTTGTTGTTGTTGCTGCGGGTGTTATTGTTATGGTGGTTGTG
CTTTTCTGGTTTGTGCTGTTTCGGCTGCTGTGGTTGCCTGTTTGCCCGCT
GCTGCTGTCGTGATACTGCCATCGAGTTAGCATTACCTCTCCTCCTGCTG
CCGTTATGGACTGATCCTCTCTGAGGCATAGGCGTCTATTTAGTGATACT
CGCCCAAATACCATCCCTCCTCCCTCCGTCGCGCAACAGGCAAGGGAGGC
AAGAAAGTCGACAAAGTCCGCACCGCTCGCCCCCGACCACGACCGAATCG
GCTGGGCAAGCAACCCGACGCCAGAAGCACGGCCGGGCACCAAGACCGGT
GAGTAAGACTCTCCTTGTCCTTGCCTGCCCCCAGCGCTTGTCTGCTGGCG
TCATTGTGCCCGAGTTTCTTTTTCGGTTGCGTCCCGCAGACCAGGACCTC
CGGCCGGCCAGTAAAAATATTGCAGTATGTAGCCGCCGCCAGGAGTGGTA
CGCCCTTCTGTGTGATGATACGATTCGTTCTCCCTGTGTTGCTTTGCGCA
CCGTCGCGCTTAAGCGGAAACCTTTGTGCTGTTGTGTGTGGGGTCTTCGG
TCTAGAGTTATACAGCAGTGTCGGAGCTGCAATAAGAGCACTCGCAAGAT
TTGCTTGCTATAGGCGTCCTCCCGATGGAAAAATTGGTACTGGGCTATCT
ATGTGCCGACCCACCCCCCTTGACCACAATATCTTTGTCCAGCACAGGCA
CATTGCAGAACACTGGCTCTCGAACATGTGCGACCTGTACGAACCCGAGG
GTGAGGCCTTTGTGTCCCCCGGGGATTCATGGCGTTCGTGCACGGGGCTT
CTGACAGATGCGTCGTTACCTCCAAGGTTAACGAGTGGCGCTGACATCCC
GGGAATAGAGGCTTTGTTGACGCCCCCCGGGTATTTGTTTGCCCTCCTCC
TCCCTTCAGGTGTGTCATATGCCCGTTGAGTCCGCCCCTGGTTTTGGTTC
TGATCTTCCCGCCTTCTCAACCCCTTCTGCCGATGCTGTTCTAAGGAGTG
GGAAAGTATCTCGGAGCCGCAGCCGCGACCACCCTGCCCCGCTCGGCGTC
GATGTCGTCGGCCGCCACAGCACCGGAAGGAGCGGCAAGAGCGGCCGGAG
TTAGCGCGGCCGGCAGCGGCAGCAGCATTAACTGGGCAGACCCGGCGATT
GACGCGGCCGCGCGTGCTACCGCTGCCGCGGCAAAGGGGAAGGCGAAGGC
GAAGGCGAAGAAGGGAGGCGCTGGCGGATTTGGAGATTTTTCGGAGTGGT
AGACTCGCGCTGTTCCACGTGTCGCGGGCCTATG back to topCoding sequence (CDS) from alignment at Scaffold_129:406773..411556+ >EsuBft2116_4a-0001 ID=EsuBft2116_4a-0001|Name=EsuBft2116_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1221bp|location=Sequence derived from alignment at Scaffold_129:406773..411556+ (Ectocarpus subulatus male Bft15b) ATGACCAGCGGGAAGACGTCGGGCTCGTTCACCTCCAGCGCGCTTGCGGT GAGCACGGAGAGCAAAGCCCGCCTTGCCACGGACGACGAAATCAACGACG CCCGCTGGTACCGTCTCCGAAAACTTGGGAAGAAGGGGTACTGCCAGCTT CAGACTACCAAGGGGAACATCAACGTCGAGATCCACTGCGACATCGTTCC GCGCATGGCCGAGAACTTCCTGGGACTGTGTGAGAAGGAGTACTACGATG GGACCAAGTTCCACCGAAGCATTCGTAATTTCATGCTTCAGGGGGGAGAC CCGACGGGGTCCGGGCGGGGAGGCGAGAGCTACTGGGGCGGCAAGATCAA GGACGAGTTCGAGTCCCGCATGACGCACGACAAGAGGGGCGTGCTGAGCA TGGCCAACTCGGGACCGGACACGACGGGCTCGCAGTTCTTCATCACGTAC AAGTCGTGCAGGCACCTCGACAACCAACACTCCGTCTTCGGCAGGGTGGT CGGTGGCATGCCAGCGCTGGCCGCGATAGAGGCGGTCCCCACAGACTCGA AGGACAAGCCGAGAGAGGACATCGTGCTTGTCAAGGCGACGGTGTTCAGC AACCCTGTCACGGAGATGGAGGACGCGCTGGAGCAAGAGCTGCAGGCCAA GATCGACGCGAGAGAAGTGAGCAAGGGAGGCAAGAAAGTCGACAAAGTCC GCACCGCTCGCCCCCGACCACGACCGAATCGGCTGGGCAAGCAACCCGAC GCCAGAAGCACGGCCGGGCACCAAGACCGGCACATTGCAGAACACTGGCT CTCGAACATGTGCGACCTGTACGAACCCGAGGGTGAGGCCTTTGTGTCCC CCGGGGATTCATGGCGTTCGTGCACGGGGCTTCTGACAGATGCGTCGTTA CCTCCAAGGTTAACGAGTGGCGCTGACATCCCGGGAATAGAGGCTTTGTT GACGCCCCCCGGGTATTTGTTTGCCCTCCTCCTCCCTTCAGCCGCGACCA CCCTGCCCCGCTCGGCGTCGATGTCGTCGGCCGCCACAGCACCGGAAGGA GCGGCAAGAGCGGCCGGAGTTAGCGCGGCCGGCAGCGGCAGCAGCATTAA CTGGGCAGACCCGGCGATTGACGCGGCCGCGCGTGCTACCGCTGCCGCGG CAAAGGGGAAGGCGAAGGCGAAGGCGAAGAAGGGAGGCGCTGGCGGATTT GGAGATTTTTCGGAGTGGTAG back to top
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