EsuBft207_9a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft207_9a-0001
Unique NameEsuBft207_9a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_358contigScaffold_358:261541..264578 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FUX9
ProteomeIdEsuBft207_9
Protein domainsIPR000719
Protein domainsIPR011009
Protein domainsG3DSA
Ownerapollo_admin@sb-roscoff.fr
Nb exon2
Max annot lvl2759|Eukaryota
Length250
Hectar predicted targeting categoryother localisation
Evalue1.95e-141
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Descriptionprotein serine/threonine kinase activity
COG categoryT
Cross References
External references for this mRNA
DatabaseAccession
GO0005524
GO0006468
GO0004672
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft207_9aEsuBft207_9aEctocarpus subulatus male Bft15bgeneScaffold_358 261541..264578 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_9a-0001EsuBft207_9Ectocarpus subulatus male Bft15bpolypeptideScaffold_358 263600..264578 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_9a-0001-exonEsuBft207_9a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_358 261541..262869 -
EsuBft207_9a-0001-exonagat-exon-57852Ectocarpus subulatus male Bft15bexonScaffold_358 263138..263732 -
EsuBft207_9a-0001-exonagat-exon-57851Ectocarpus subulatus male Bft15bexonScaffold_358 263995..264578 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_9a-0001-exonagat-three_prime_utr-8097Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_358 261541..262869 -
EsuBft207_9a-0001-exonagat-three_prime_utr-8098Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_358 263138..263599 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_9a-0001-cdsEsuBft207_9a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_358 263600..263732 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft207_9a-0001 ID=EsuBft207_9a-0001|Name=EsuBft207_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2508bp|location=Sequence derived from alignment at Scaffold_358:261541..264578- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGATGCGCCTCGTTTTCGTATTTCAGCCGGAGAACATCCTCCTCGACGA
CGCTGGCGGGTTTGCCCGCCTGTGCGATTTTGGCTTCGCCAAGCACGCGC
CATCGGTAACCCCGGCAGACCTCGCGGGCGACCCCACGACCTGCTACCAA
GCCCCCGAGCGCTGGCAGGCCTGCCGCAGCCCCGCGGCCGCCCGCGCGCG
AGAGAAAATGGCAGCAGAAACGGTGGTGGCCGGCGAAAAAGGCGAAGATG
ATGCCGGCGAAGACCAAGACGAAGGCGGCGGCCGCGGCGGCGGTGGCGGG
AGGGACGACTGCGCAAGCGGCGTGCCTCAGAGAGACGAGACCACGGAGAC
CCTGTTCGCCAGCGACGTCTTCAGCGCGGGCGTTACGTTGTTCGTCCTCG
TCTCGTACCACGCCATTCTCGCCCGCCTGGCGACGGAGGCCCCGTGCAGG
GACGTCGCAGAGGCGGACGCATCGAGCCTTCCGGCTCTGAACGTCTTCCA
GCACGCCGTGGGCGGCGACATGTTCGGCCTGCTGCAGGGGGGCACCCGGA
ACGGCGGCGTGCAGGGGCGGTTGTGGGCGTACTGGGAGGTGTATGGGCTA
TCGCTACCGCAGGCGCTGCGGGATCTACTAGACGGAGTCTTGCACCCTGT
TCCCGACCGAAGGTTTTCTATGCAACAGGCATTCGATTGGATGGATTCAC
ACCCTGAAATGTTTTAGCCCTGGCCAAATTGTGGATAATATTTTTGGTCA
GGTGTTCGATCGAATGGAATCGCACCCGGGTAAGAAATTACACCGGCCAT
GTTGTGGACATTCTAGCAGAAGAGCAAACAAGAAAAACAACCTCCGTAGT
TGTGATTCCTGTGACACGTTTACATCTCGCCGCGTGTTGTGAGGGGGGGG
GGAGACGGGAGGGCGTACTCTTATGTTTTGCATGCCCTAGCGGTTAGACC
ATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCCCACAGGACCGAT
CACTGATGGACAATCGTTCCTTTCTACTTTGCCAAAGGAGACGGGAGGGG
GGGAGATTATGGAAAGTGTACACAAAATGGGTTTGTTGATAATTTCAGTC
GCACAGCTAGTGTACTCCACACAGAAGAGACATGGTGCAAAGAGAAGTAG
TGTCATTCTTCTTTCGTCGTATTACAAAGGTAGTTCATCTACTGTTCATC
TTATGAGTAGTGCGCGTGCTCGTCGTCACCGGGGGCAGGCTGCAAGGAAT
CGTCGAGGAAAAACAGGCAATGAGTCGTGTGGGTTTTGAGCTCTTGTGTG
TTTTGTATAACATGGTGGATCGGTCTCCTTGGTTGGTGGCGTTTTTTTTG
TAGATCTCAGGTGCGCACGAAAAAAATGTGTATGATGTTGTGTTCGTCGC
GTCGTCCTGTGTAAAGCTCTCGGCGAGTATGAAGACCAGGTAGCGGTGGG
TGTAAATAGTTTAGAAGGTAGATTGCATGTTATGGTTCCCCGCGCATTGT
CATAATAAGAAAAAATCCCCTCCTTTTACCGTTTATTGTGCGTGGTGGTA
CCGTAAATATATTTCAAAAGGCTCTTTATAGACTATTTCTATTGCGGAGG
CCCTTTACCCCATGGTCACTTACTCCTTCTCCCTCATTGGGTGCTATTGT
TTTCGCGTGATGTCCCGAGTGAGAGCCTTTGAGTGCAGCTCTGAGTTAGA
GAAAAACGACATGCTGGATGGATAGTTGTCGGCCCTGTTGGTTGGCTTTA
CCTGCCGGTAAGTCACACGAGGAGTGGGACGAATGGATATCTTCGTTTTT
CCCGAGTCTTGTTGTGTCAAGATGACATACATACATACATACATACATAC
ATACATACACGTATTTCGCGTGATGGCGCAAGACGCACCAGAGAAGAAAC
AACCTAACGAGATTGCTTGAGTAAGTGGGGCTGATGCTAGCATTGCGGAG
CAGGGAGTAATATCGTGCCGTACGTCAGAGAGGGTGGCTGCCTCGAGTAT
GCGCGTGATTTGCTTGCTTGTTGATGAATTGACGGCAGACCGGTCTTGGG
TACTATTAGTACTATTACTACTACTACTACTTCTGTTCTGATTGTTGGTA
ACATTACTGTTGTATGGGGGTGAGAAAAAGAGCCATCCCCATCCAGAGGA
ACGGATTGGATATTTATCCGGTGTGTGAGAAGCTGTTTTTGGGAACTAAC
AGGAGCTCGATTGCAACCAAAAATCGTCGACCGGATAGTAGGTGGTGATG
ATGATGTGGGTGCGGTGTGTACGGCGTACGCGAGGCATTGTTGTGCTTCT
CTACAGGATGTATGCAAGCAGCACGCTGTAGAGGTAGTAGGTAGTTAACG
TCCTTGTGTAATGTTACCGACGGGTCTATAGGCTTGGTTTGCTTGTGTAG
CATGTGTGTGTGGAGCATCATCGGGTAAATACTGTAGCACCCTTTTTGCT
TAGATATTCTTGTTCGTTTTTTGTCGAGAGAGAGAGATGGTTTTGGCGCA
TAATCAAG
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protein sequence of EsuBft207_9a-0001

>EsuBft207_9 ID=EsuBft207_9|Name=EsuBft207_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=238bp
MMRLVFVFQPENILLDDAGGFARLCDFGFAKHAPSVTPADLAGDPTTCYQ
APERWQACRSPAAARAREKMAAETVVAGEKGEDDAGEDQDEGGGRGGGGG
RDDCASGVPQRDETTETLFASDVFSAGVTLFVLVSYHAILARLATEAPCR
DVAEADASSLPALNVFQHAVGGDMFGLLQGGTRNGGVQGRLWAYWEVYGL
SLPQALRDLLDGVLHPVPDRRFSMQQAFDWMDSHPEMF
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mRNA from alignment at Scaffold_358:261541..264578-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft207_9a-0001 ID=EsuBft207_9a-0001|Name=EsuBft207_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3038bp|location=Sequence derived from alignment at Scaffold_358:261541..264578- (Ectocarpus subulatus male Bft15b)
ATGATGCGCCTCGTTTTCGTATTTCAGCCGGAGAACATCCTCCTCGACGA
CGCTGGCGGGTTTGCCCGCCTGTGCGATTTTGGCTTCGCCAAGCACGCGC
CATCGGTAACCCCGGCAGACCTCGCGGGCGACCCCACGACCTGCTACCAA
GCCCCCGAGCGCTGGCAGGCCTGCCGCAGCCCCGCGGCCGCCCGCGCGCG
AGAGAAAATGGCAGCAGAAACGGTGGTGGCCGGCGAAAAAGGCGAAGATG
ATGCCGGCGAAGACCAAGACGAAGGCGGCGGCCGCGGCGGCGGTGGCGGG
AGGGACGACTGCGCAAGCGGCGTGCCTCAGAGAGACGAGACCACGGAGAC
CCTGTTCGCCAGCGACGTCTTCAGCGCGGGCGTTACGTTGTTCGTCCTCG
TCTCGTACCACGCCATTCTCGCCCGCCTGGCGACGGAGGCCCCGTGCAGG
GACGTCGCAGAGGCGGACGCATCGAGCCTTCCGGCTCTGAACGTCTTCCA
GCACGCCGTGGGCGGCGACATGTTCGGCCTGCTGCAGGGGGGCACCCGGA
ACGGCGGCGTGCAGGGGCGGTTGTGGGCGTACTGGTGAGATACATATACA
TATATCGCATGTTGTTTTGTCATGCTGCCTTGAACCGGTACGCCGACGCT
TTGCAAGTGGAGACGACGAGAGTTGTCGTAGCACCAGTTTGGGGATACCA
CACGTGTCGTTGGGGCTAACGTACTCTACAAGGAAAATCTTCTCCACGTA
TTTGATGAGTACCCGCGGTTGAATCCTGTTCACATCTATCTCTCTTTCTC
CCTCTACGCGTATGTACGTCTGTTCTCGTCCTCTTTCGTGTTTTAGGGAG
GTGTATGGGCTATCGCTACCGCAGGCGCTGCGGGATCTACTAGACGGAGT
CTTGCACCCTGTTCCCGACCGAAGGTTTTCTATGCAACAGGCATTCGATT
GGATGGATTCACACCCTGAAATGTTTTAGCCCTGGCCAAATTGTGGATAA
TATTTTTGGTCAGGTGTTCGATCGAATGGAATCGCACCCGGGTAAGAAAT
TACACCGGCCATGTTGTGGACATTCTAGCAGAAGAGCAAACAAGAAAAAC
AACCTCCGTAGTTGTGATTCCTGTGACACGTTTACATCTCGCCGCGTGTT
GTGAGGGGGGGGGGAGACGGGAGGGCGTACTCTTATGTTTTGCATGCCCT
AGCGGTTAGACCATTGACCACGCGTCCTCGAGAGGACGGAGCATTGTTCC
CACAGGACCGATCACTGATGGACAATCGTTCCTTTCTACTTTGCCAAAGG
AGACGGGAGGGGGGGAGATTATGGAAAGTGTACACAAAATGGGTTTGTTG
ATAATTTCAGTCGCACAGCTAGTGTACTCCACACAGAAGAGACATGGTGC
AAAGAGAAGTAGTGTCATTCTTCTTTCGTCGTATTACAAAGGTGTGTGGG
TTATTGGTCCCGAGACGATACTCGCTTTTCTTTTTGTTTCCCTTCTTTGT
GATTGAAAGAAAGGCAGGCGGGTCTCGAAATGTGTTGAGGTAGACATTGC
TGTGTGCGGTGGGGGAGGTGTGTCTGGATTTAAGTGTCTCCGTTTCTTCA
AGTTTATCGTGTAGCGAGAGTGCACCTTGAATGCCAGGAATGAATTGACC
CGATGCGTAGTCTACAACGTGTTATACATGTTGTCTTTACATTCTAAGTC
TGTCTGCAGGTAGTTCATCTACTGTTCATCTTATGAGTAGTGCGCGTGCT
CGTCGTCACCGGGGGCAGGCTGCAAGGAATCGTCGAGGAAAAACAGGCAA
TGAGTCGTGTGGGTTTTGAGCTCTTGTGTGTTTTGTATAACATGGTGGAT
CGGTCTCCTTGGTTGGTGGCGTTTTTTTTGTAGATCTCAGGTGCGCACGA
AAAAAATGTGTATGATGTTGTGTTCGTCGCGTCGTCCTGTGTAAAGCTCT
CGGCGAGTATGAAGACCAGGTAGCGGTGGGTGTAAATAGTTTAGAAGGTA
GATTGCATGTTATGGTTCCCCGCGCATTGTCATAATAAGAAAAAATCCCC
TCCTTTTACCGTTTATTGTGCGTGGTGGTACCGTAAATATATTTCAAAAG
GCTCTTTATAGACTATTTCTATTGCGGAGGCCCTTTACCCCATGGTCACT
TACTCCTTCTCCCTCATTGGGTGCTATTGTTTTCGCGTGATGTCCCGAGT
GAGAGCCTTTGAGTGCAGCTCTGAGTTAGAGAAAAACGACATGCTGGATG
GATAGTTGTCGGCCCTGTTGGTTGGCTTTACCTGCCGGTAAGTCACACGA
GGAGTGGGACGAATGGATATCTTCGTTTTTCCCGAGTCTTGTTGTGTCAA
GATGACATACATACATACATACATACATACATACATACACGTATTTCGCG
TGATGGCGCAAGACGCACCAGAGAAGAAACAACCTAACGAGATTGCTTGA
GTAAGTGGGGCTGATGCTAGCATTGCGGAGCAGGGAGTAATATCGTGCCG
TACGTCAGAGAGGGTGGCTGCCTCGAGTATGCGCGTGATTTGCTTGCTTG
TTGATGAATTGACGGCAGACCGGTCTTGGGTACTATTAGTACTATTACTA
CTACTACTACTTCTGTTCTGATTGTTGGTAACATTACTGTTGTATGGGGG
TGAGAAAAAGAGCCATCCCCATCCAGAGGAACGGATTGGATATTTATCCG
GTGTGTGAGAAGCTGTTTTTGGGAACTAACAGGAGCTCGATTGCAACCAA
AAATCGTCGACCGGATAGTAGGTGGTGATGATGATGTGGGTGCGGTGTGT
ACGGCGTACGCGAGGCATTGTTGTGCTTCTCTACAGGATGTATGCAAGCA
GCACGCTGTAGAGGTAGTAGGTAGTTAACGTCCTTGTGTAATGTTACCGA
CGGGTCTATAGGCTTGGTTTGCTTGTGTAGCATGTGTGTGTGGAGCATCA
TCGGGTAAATACTGTAGCACCCTTTTTGCTTAGATATTCTTGTTCGTTTT
TTGTCGAGAGAGAGAGATGGTTTTGGCGCATAATCAAG
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Coding sequence (CDS) from alignment at Scaffold_358:261541..264578-

>EsuBft207_9a-0001 ID=EsuBft207_9a-0001|Name=EsuBft207_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=717bp|location=Sequence derived from alignment at Scaffold_358:261541..264578- (Ectocarpus subulatus male Bft15b)
ATGATGCGCCTCGTTTTCGTATTTCAGCCGGAGAACATCCTCCTCGACGA
CGCTGGCGGGTTTGCCCGCCTGTGCGATTTTGGCTTCGCCAAGCACGCGC
CATCGGTAACCCCGGCAGACCTCGCGGGCGACCCCACGACCTGCTACCAA
GCCCCCGAGCGCTGGCAGGCCTGCCGCAGCCCCGCGGCCGCCCGCGCGCG
AGAGAAAATGGCAGCAGAAACGGTGGTGGCCGGCGAAAAAGGCGAAGATG
ATGCCGGCGAAGACCAAGACGAAGGCGGCGGCCGCGGCGGCGGTGGCGGG
AGGGACGACTGCGCAAGCGGCGTGCCTCAGAGAGACGAGACCACGGAGAC
CCTGTTCGCCAGCGACGTCTTCAGCGCGGGCGTTACGTTGTTCGTCCTCG
TCTCGTACCACGCCATTCTCGCCCGCCTGGCGACGGAGGCCCCGTGCAGG
GACGTCGCAGAGGCGGACGCATCGAGCCTTCCGGCTCTGAACGTCTTCCA
GCACGCCGTGGGCGGCGACATGTTCGGCCTGCTGCAGGGGGGCACCCGGA
ACGGCGGCGTGCAGGGGCGGTTGTGGGCGTACTGGGAGGTGTATGGGCTA
TCGCTACCGCAGGCGCTGCGGGATCTACTAGACGGAGTCTTGCACCCTGT
TCCCGACCGAAGGTTTTCTATGCAACAGGCATTCGATTGGATGGATTCAC
ACCCTGAAATGTTTTAG
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